EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0029850 (Gene tree)
Gene ID: 110323997
Gene Symbol: Papola
Alias: PapIII|Plap
Full Name: poly(A) polymerase alpha
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Plus strand
Length: 56092 bases
Position: chr7:99818385-99874476
Accession: 110323997
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0083403	PAP_RNA-bind	PF04926.15	1.4e-25	1	1
MGP_PahariEiJ_P0083389	PAP_RNA-bind	PF04926.15	1.1e-24	1	1
MGP_PahariEiJ_P0083399	PAP_RNA-bind	PF04926.15	1.1e-24	1	1
MGP_PahariEiJ_P0083392	PAP_RNA-bind	PF04926.15	1.1e-24	1	1
MGP_PahariEiJ_P0083402	PAP_RNA-bind	PF04926.15	7.3e-24	1	1
MGP_PahariEiJ_P0083390	PAP_RNA-bind	PF04926.15	1.1e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0083390	-	2436	-	MGP_PahariEiJ_P0083390	732 (aa)	-	-
MGP_PahariEiJ_T0083391	-	726	-	-	- (aa)	-	-
MGP_PahariEiJ_T0083392	-	2533	-	MGP_PahariEiJ_P0083392	693 (aa)	-	UPI0001F796E6
MGP_PahariEiJ_T0083393	-	2081	-	-	- (aa)	-	-
MGP_PahariEiJ_T0083394	-	2223	-	MGP_PahariEiJ_P0083394	111 (aa)	-	UPI0001F796E7
MGP_PahariEiJ_T0083395	-	809	-	-	- (aa)	-	-
MGP_PahariEiJ_T0083389	-	4381	XM_021201385	MGP_PahariEiJ_P0083389	739 (aa)	XP_021057044	UPI000016385C
MGP_PahariEiJ_T0083397	-	529	-	MGP_PahariEiJ_P0083397	66 (aa)	-	UPI0001F796E9
MGP_PahariEiJ_T0083398	-	741	-	MGP_PahariEiJ_P0083398	23 (aa)	-	UPI0001F796EA
MGP_PahariEiJ_T0083399	-	2594	-	MGP_PahariEiJ_P0083399	718 (aa)	XP_021057045	UPI0001F796EB
MGP_PahariEiJ_T0083402	-	1497	-	MGP_PahariEiJ_P0083402	418 (aa)	-	-
MGP_PahariEiJ_T0083403	-	966	-	MGP_PahariEiJ_P0083403	321 (aa)	-	-
MGP_PahariEiJ_T0083404	-	538	-	-	- (aa)	-	-
MGP_PahariEiJ_T0083405	-	678	-	MGP_PahariEiJ_P0083405	119 (aa)	-	-
MGP_PahariEiJ_T0083400	-	1170	-	-	- (aa)	-	-
MGP_PahariEiJ_T0083401	-	294	-	-	- (aa)	-	-
MGP_PahariEiJ_T0083396	-	4362	XM_021201387	MGP_PahariEiJ_P0083396	168 (aa)	XP_021057046	UPI0001F796E8

Gene Model

Click here to download MGP_PahariEiJ_G0029850's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0029850's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PahariEiJ_G0029850	Papola	98	60.680	MGP_PahariEiJ_G0016746	Papolg	99	60.680
MGP_PahariEiJ_G0029850	Papola	93	84.914	MGP_PahariEiJ_G0024534	Papolb	99	84.914

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0029850	Papola	100	95.442	ENSG00000090060	PAPOLA	98	99.283	Homo_sapiens
MGP_PahariEiJ_G0029850	Papola	99	95.935	ENSAMEG00000014142	PAPOLA	99	95.935	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0029850	Papola	99	90.379	ENSAPLG00000006645	PAPOLA	99	90.379	Anas_platyrhynchos
MGP_PahariEiJ_G0029850	Papola	100	92.236	ENSACAG00000013474	PAPOLA	99	95.144	Anolis_carolinensis
MGP_PahariEiJ_G0029850	Papola	77	91.011	ENSANAG00000027941	-	98	91.011	Aotus_nancymaae
MGP_PahariEiJ_G0029850	Papola	99	96.527	ENSANAG00000018274	PAPOLA	99	98.346	Aotus_nancymaae
MGP_PahariEiJ_G0029850	Papola	100	73.257	ENSAMXG00000018141	papola	99	84.740	Astyanax_mexicanus
MGP_PahariEiJ_G0029850	Papola	100	97.258	ENSBTAG00000004054	PAPOLA	100	97.258	Bos_taurus
MGP_PahariEiJ_G0029850	Papola	100	96.280	ENSCJAG00000006512	PAPOLA	99	98.346	Callithrix_jacchus
MGP_PahariEiJ_G0029850	Papola	100	95.570	ENSCAFG00000017783	PAPOLA	100	95.570	Canis_familiaris
MGP_PahariEiJ_G0029850	Papola	100	96.076	ENSCAFG00020011550	PAPOLA	100	96.076	Canis_lupus_dingo
MGP_PahariEiJ_G0029850	Papola	100	95.805	ENSCHIG00000025004	-	100	95.805	Capra_hircus
MGP_PahariEiJ_G0029850	Papola	99	96.377	ENSTSYG00000012384	PAPOLA	99	96.377	Carlito_syrichta
MGP_PahariEiJ_G0029850	Papola	100	94.099	ENSCPOG00000002648	PAPOLA	100	92.496	Cavia_porcellus
MGP_PahariEiJ_G0029850	Papola	100	95.304	ENSCCAG00000025120	PAPOLA	98	97.782	Cebus_capucinus
MGP_PahariEiJ_G0029850	Papola	100	95.442	ENSCATG00000018815	PAPOLA	99	98.696	Cercocebus_atys
MGP_PahariEiJ_G0029850	Papola	100	96.681	ENSCLAG00000016342	PAPOLA	100	96.681	Chinchilla_lanigera
MGP_PahariEiJ_G0029850	Papola	100	95.436	ENSCSAG00000010516	PAPOLA	100	95.436	Chlorocebus_sabaeus
MGP_PahariEiJ_G0029850	Papola	86	79.564	ENSCHOG00000001115	PAPOLA	72	81.818	Choloepus_hoffmanni
MGP_PahariEiJ_G0029850	Papola	100	92.568	ENSCPBG00000024125	PAPOLA	100	92.568	Chrysemys_picta_bellii
MGP_PahariEiJ_G0029850	Papola	100	92.683	ENSCANG00000000159	PAPOLA	100	90.175	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0029850	Papola	100	87.267	ENSCGRG00001002732	-	99	85.908	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0029850	Papola	100	92.547	ENSCGRG00001000229	-	100	90.122	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0029850	Papola	100	98.701	ENSCGRG00001022693	-	100	98.701	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0029850	Papola	98	82.231	ENSCGRG00000001888	-	96	82.369	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0029850	Papola	100	92.236	ENSCGRG00000000257	-	100	85.552	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0029850	Papola	100	97.976	ENSCGRG00000003664	-	100	98.696	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0029850	Papola	69	53.846	ENSCSEG00000001841	-	71	53.846	Cynoglossus_semilaevis
MGP_PahariEiJ_G0029850	Papola	100	70.937	ENSDARG00000009585	papola	100	70.799	Danio_rerio
MGP_PahariEiJ_G0029850	Papola	100	94.393	ENSDORG00000013415	-	100	89.831	Dipodomys_ordii
MGP_PahariEiJ_G0029850	Papola	100	84.472	ENSETEG00000004889	PAPOLA	100	82.632	Echinops_telfairi
MGP_PahariEiJ_G0029850	Papola	100	69.221	ENSELUG00000018972	papola	100	68.966	Esox_lucius
MGP_PahariEiJ_G0029850	Papola	100	97.547	ENSFCAG00000006784	PAPOLA	100	97.547	Felis_catus
MGP_PahariEiJ_G0029850	Papola	99	93.750	ENSFALG00000002547	PAPOLA	98	87.368	Ficedula_albicollis
MGP_PahariEiJ_G0029850	Papola	99	95.217	ENSFDAG00000010370	PAPOLA	100	95.217	Fukomys_damarensis
MGP_PahariEiJ_G0029850	Papola	99	62.848	ENSGMOG00000010209	papola	100	66.910	Gadus_morhua
MGP_PahariEiJ_G0029850	Papola	100	89.986	ENSGALG00000033099	PAPOLA	100	89.986	Gallus_gallus
MGP_PahariEiJ_G0029850	Papola	69	53.958	ENSGACG00000006142	-	100	53.542	Gasterosteus_aculeatus
MGP_PahariEiJ_G0029850	Papola	100	90.994	ENSGAGG00000020500	PAPOLA	99	94.864	Gopherus_agassizii
MGP_PahariEiJ_G0029850	Papola	100	95.442	ENSGGOG00000006287	PAPOLA	100	95.442	Gorilla_gorilla
MGP_PahariEiJ_G0029850	Papola	100	96.104	ENSHGLG00000007909	-	100	96.104	Heterocephalus_glaber_female
MGP_PahariEiJ_G0029850	Papola	100	83.230	ENSHGLG00000017457	-	100	82.561	Heterocephalus_glaber_female
MGP_PahariEiJ_G0029850	Papola	100	82.919	ENSHGLG00000007467	-	100	77.131	Heterocephalus_glaber_female
MGP_PahariEiJ_G0029850	Papola	100	95.960	ENSHGLG00100017273	PAPOLA	100	95.960	Heterocephalus_glaber_male
MGP_PahariEiJ_G0029850	Papola	100	68.441	ENSIPUG00000005919	papola	100	68.274	Ictalurus_punctatus
MGP_PahariEiJ_G0029850	Papola	100	97.258	ENSSTOG00000011471	PAPOLA	100	97.258	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0029850	Papola	99	96.522	ENSJJAG00000024340	Papola	100	96.522	Jaculus_jaculus
MGP_PahariEiJ_G0029850	Papola	99	76.653	ENSLACG00000018136	PAPOLA	99	76.653	Latimeria_chalumnae
MGP_PahariEiJ_G0029850	Papola	99	66.220	ENSLOCG00000008632	papola	99	66.265	Lepisosteus_oculatus
MGP_PahariEiJ_G0029850	Papola	99	94.973	ENSLAFG00000000946	PAPOLA	99	94.973	Loxodonta_africana
MGP_PahariEiJ_G0029850	Papola	100	95.442	ENSMFAG00000001792	PAPOLA	99	98.521	Macaca_fascicularis
MGP_PahariEiJ_G0029850	Papola	100	95.436	ENSMMUG00000018610	PAPOLA	100	96.270	Macaca_mulatta
MGP_PahariEiJ_G0029850	Papola	100	95.442	ENSMNEG00000043747	PAPOLA	99	97.426	Macaca_nemestrina
MGP_PahariEiJ_G0029850	Papola	100	95.442	ENSMLEG00000032066	PAPOLA	100	95.442	Mandrillus_leucophaeus
MGP_PahariEiJ_G0029850	Papola	100	88.820	ENSMGAG00000013228	-	100	89.050	Meleagris_gallopavo
MGP_PahariEiJ_G0029850	Papola	100	98.557	ENSMAUG00000017178	Papola	100	98.557	Mesocricetus_auratus
MGP_PahariEiJ_G0029850	Papola	100	97.118	ENSMICG00000010347	PAPOLA	100	97.118	Microcebus_murinus
MGP_PahariEiJ_G0029850	Papola	100	98.990	ENSMOCG00000021670	Papola	100	98.990	Microtus_ochrogaster
MGP_PahariEiJ_G0029850	Papola	100	95.264	ENSMODG00000012887	-	100	95.264	Monodelphis_domestica
MGP_PahariEiJ_G0029850	Papola	99	81.111	ENSMODG00000001969	-	99	81.111	Monodelphis_domestica
MGP_PahariEiJ_G0029850	Papola	100	99.423	MGP_CAROLIEiJ_G0018093	Papola	100	99.423	Mus_caroli
MGP_PahariEiJ_G0029850	Papola	100	100.000	ENSMUSG00000021111	Papola	100	100.000	Mus_musculus
MGP_PahariEiJ_G0029850	Papola	100	99.865	MGP_SPRETEiJ_G0018943	Papola	100	99.865	Mus_spretus
MGP_PahariEiJ_G0029850	Papola	100	96.752	ENSMPUG00000003054	PAPOLA	100	96.752	Mustela_putorius_furo
MGP_PahariEiJ_G0029850	Papola	100	94.181	ENSMLUG00000010922	PAPOLA	100	94.181	Myotis_lucifugus
MGP_PahariEiJ_G0029850	Papola	100	97.258	ENSNGAG00000022172	Papola	100	97.258	Nannospalax_galili
MGP_PahariEiJ_G0029850	Papola	99	90.793	ENSNLEG00000000625	PAPOLA	100	90.793	Nomascus_leucogenys
MGP_PahariEiJ_G0029850	Papola	74	95.082	ENSMEUG00000007831	-	74	86.614	Notamacropus_eugenii
MGP_PahariEiJ_G0029850	Papola	100	92.260	ENSOPRG00000007625	PAPOLA	100	90.291	Ochotona_princeps
MGP_PahariEiJ_G0029850	Papola	68	54.008	ENSONIG00000001062	-	96	54.008	Oreochromis_niloticus
MGP_PahariEiJ_G0029850	Papola	99	96.671	ENSOANG00000013812	PAPOLA	99	96.671	Ornithorhynchus_anatinus
MGP_PahariEiJ_G0029850	Papola	99	92.944	ENSOCUG00000011531	PAPOLA	99	92.944	Oryctolagus_cuniculus
MGP_PahariEiJ_G0029850	Papola	100	96.351	ENSOGAG00000004611	PAPOLA	100	96.351	Otolemur_garnettii
MGP_PahariEiJ_G0029850	Papola	100	96.346	ENSOARG00000016579	-	100	96.346	Ovis_aries
MGP_PahariEiJ_G0029850	Papola	100	95.442	ENSPPAG00000030505	PAPOLA	100	95.442	Pan_paniscus
MGP_PahariEiJ_G0029850	Papola	100	96.617	ENSPPRG00000008616	PAPOLA	100	96.617	Panthera_pardus
MGP_PahariEiJ_G0029850	Papola	99	96.603	ENSPTIG00000018852	PAPOLA	99	96.603	Panthera_tigris_altaica
MGP_PahariEiJ_G0029850	Papola	100	95.442	ENSPTRG00000006704	PAPOLA	100	95.442	Pan_troglodytes
MGP_PahariEiJ_G0029850	Papola	100	95.442	ENSPANG00000025582	PAPOLA	98	98.696	Papio_anubis
MGP_PahariEiJ_G0029850	Papola	96	74.208	ENSPKIG00000014471	papola	100	70.748	Paramormyrops_kingsleyae
MGP_PahariEiJ_G0029850	Papola	100	93.108	ENSPSIG00000014157	PAPOLA	87	93.108	Pelodiscus_sinensis
MGP_PahariEiJ_G0029850	Papola	100	98.846	ENSPEMG00000000043	Papola	100	98.846	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0029850	Papola	100	95.000	ENSPCIG00000013234	PAPOLA	100	95.779	Phascolarctos_cinereus
MGP_PahariEiJ_G0029850	Papola	100	93.020	ENSPPYG00000006128	PAPOLA	100	93.020	Pongo_abelii
MGP_PahariEiJ_G0029850	Papola	100	90.373	ENSPCAG00000004199	PAPOLA	100	90.549	Procavia_capensis
MGP_PahariEiJ_G0029850	Papola	100	94.099	ENSPCOG00000022117	PAPOLA	99	93.343	Propithecus_coquereli
MGP_PahariEiJ_G0029850	Papola	100	95.129	ENSPVAG00000013925	PAPOLA	100	95.129	Pteropus_vampyrus
MGP_PahariEiJ_G0029850	Papola	100	72.214	ENSPNAG00000010467	papola	100	72.380	Pygocentrus_nattereri
MGP_PahariEiJ_G0029850	Papola	100	98.758	ENSRNOG00000004827	Papola	100	98.647	Rattus_norvegicus
MGP_PahariEiJ_G0029850	Papola	99	95.839	ENSRBIG00000038490	PAPOLA	100	95.839	Rhinopithecus_bieti
MGP_PahariEiJ_G0029850	Papola	100	95.442	ENSRROG00000025545	PAPOLA	100	95.442	Rhinopithecus_roxellana
MGP_PahariEiJ_G0029850	Papola	99	96.126	ENSSBOG00000024061	PAPOLA	100	96.126	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0029850	Papola	99	94.701	ENSSHAG00000015211	PAPOLA	99	94.701	Sarcophilus_harrisii
MGP_PahariEiJ_G0029850	Papola	100	70.862	ENSSFOG00015004431	papola	99	84.629	Scleropages_formosus
MGP_PahariEiJ_G0029850	Papola	98	47.214	ENSSDUG00000018247	-	97	46.552	Seriola_dumerili
MGP_PahariEiJ_G0029850	Papola	100	92.162	ENSSPUG00000005835	PAPOLA	100	92.162	Sphenodon_punctatus
MGP_PahariEiJ_G0029850	Papola	100	97.258	ENSSSCG00000002505	-	100	97.258	Sus_scrofa
MGP_PahariEiJ_G0029850	Papola	99	90.231	ENSTGUG00000012687	PAPOLA	99	90.231	Taeniopygia_guttata
MGP_PahariEiJ_G0029850	Papola	75	87.772	ENSTBEG00000000194	PAPOLA	75	87.772	Tupaia_belangeri
MGP_PahariEiJ_G0029850	Papola	79	96.875	ENSTTRG00000005717	PAPOLA	74	96.875	Tursiops_truncatus
MGP_PahariEiJ_G0029850	Papola	61	98.815	ENSUAMG00000025737	PAPOLA	98	98.815	Ursus_americanus
MGP_PahariEiJ_G0029850	Papola	99	95.652	ENSVPAG00000006464	PAPOLA	100	95.652	Vicugna_pacos
MGP_PahariEiJ_G0029850	Papola	100	97.258	ENSVVUG00000028340	PAPOLA	100	97.258	Vulpes_vulpes
MGP_PahariEiJ_G0029850	Papola	100	83.627	ENSXETG00000013949	papola	100	83.627	Xenopus_tropicalis