EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0030262 (Gene tree)
Gene ID: 110325422
Gene Symbol: Sall2
Alias: Msal-2
Full Name: spalt like transcription factor 2
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Minus strand
Length: 20205 bases
Position: chr8:43521437-43541641
Accession: 110325422
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0084741	zf-C2H2	PF00096.26	6.5e-19	1	4
MGP_PahariEiJ_P0084741	zf-C2H2	PF00096.26	6.5e-19	2	4
MGP_PahariEiJ_P0084741	zf-C2H2	PF00096.26	6.5e-19	3	4
MGP_PahariEiJ_P0084741	zf-C2H2	PF00096.26	6.5e-19	4	4
MGP_PahariEiJ_P0084741	zf-met	PF12874.7	3e-12	1	2
MGP_PahariEiJ_P0084741	zf-met	PF12874.7	3e-12	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0084740	-	4793	-	-	- (aa)	-	-
MGP_PahariEiJ_T0084741	-	5172	XM_021203416	MGP_PahariEiJ_P0084741	1003 (aa)	XP_021059075	UPI000A30D67A

Gene Model

Click here to download MGP_PahariEiJ_G0030262's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0030262's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PahariEiJ_G0030262	Sall2	62	59.615	MGP_PahariEiJ_G0022961	Sall1	68	59.615

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0030262	Sall2	100	87.885	ENSG00000165821	SALL2	100	88.679	Homo_sapiens
MGP_PahariEiJ_G0030262	Sall2	100	86.436	ENSAMEG00000006226	SALL2	96	86.535	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0030262	Sall2	96	85.109	ENSANAG00000031405	SALL2	92	85.522	Aotus_nancymaae
MGP_PahariEiJ_G0030262	Sall2	98	86.134	ENSBTAG00000013249	SALL2	99	86.235	Bos_taurus
MGP_PahariEiJ_G0030262	Sall2	100	87.810	ENSCJAG00000008855	SALL2	100	88.008	Callithrix_jacchus
MGP_PahariEiJ_G0030262	Sall2	74	81.551	ENSCAFG00000005676	SALL2	93	75.346	Canis_familiaris
MGP_PahariEiJ_G0030262	Sall2	80	80.988	ENSCAFG00020015273	SALL2	100	76.087	Canis_lupus_dingo
MGP_PahariEiJ_G0030262	Sall2	100	86.368	ENSCHIG00000025803	SALL2	100	86.468	Capra_hircus
MGP_PahariEiJ_G0030262	Sall2	98	91.218	ENSTSYG00000030220	SALL2	89	94.937	Carlito_syrichta
MGP_PahariEiJ_G0030262	Sall2	100	85.728	ENSCPOG00000040220	SALL2	100	85.828	Cavia_porcellus
MGP_PahariEiJ_G0030262	Sall2	100	87.314	ENSCCAG00000033278	SALL2	100	88.206	Cebus_capucinus
MGP_PahariEiJ_G0030262	Sall2	100	88.206	ENSCATG00000045263	SALL2	100	88.999	Cercocebus_atys
MGP_PahariEiJ_G0030262	Sall2	100	84.806	ENSCLAG00000001400	SALL2	100	86.197	Chinchilla_lanigera
MGP_PahariEiJ_G0030262	Sall2	79	85.801	ENSCSAG00000016461	SALL2	89	87.009	Chlorocebus_sabaeus
MGP_PahariEiJ_G0030262	Sall2	79	55.960	ENSCPBG00000012695	SALL2	60	67.788	Chrysemys_picta_bellii
MGP_PahariEiJ_G0030262	Sall2	100	87.810	ENSCANG00000036872	SALL2	100	88.603	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0030262	Sall2	100	92.729	ENSCGRG00001000154	Sall2	100	92.729	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0030262	Sall2	100	92.629	ENSCGRG00000008130	Sall2	100	92.629	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0030262	Sall2	98	85.743	ENSDNOG00000032317	SALL2	99	86.047	Dasypus_novemcinctus
MGP_PahariEiJ_G0030262	Sall2	100	84.562	ENSDORG00000030154	Sall2	100	84.661	Dipodomys_ordii
MGP_PahariEiJ_G0030262	Sall2	100	88.492	ENSEASG00005011556	SALL2	100	88.492	Equus_asinus_asinus
MGP_PahariEiJ_G0030262	Sall2	94	87.856	ENSECAG00000024449	SALL2	100	87.856	Equus_caballus
MGP_PahariEiJ_G0030262	Sall2	100	87.141	ENSFCAG00000044786	SALL2	100	86.350	Felis_catus
MGP_PahariEiJ_G0030262	Sall2	100	87.611	ENSFDAG00000014250	SALL2	100	87.711	Fukomys_damarensis
MGP_PahariEiJ_G0030262	Sall2	100	88.270	ENSGGOG00000009133	SALL2	100	89.066	Gorilla_gorilla
MGP_PahariEiJ_G0030262	Sall2	100	87.861	ENSHGLG00000006009	SALL2	100	87.960	Heterocephalus_glaber_female
MGP_PahariEiJ_G0030262	Sall2	98	89.573	ENSHGLG00100000859	SALL2	99	86.996	Heterocephalus_glaber_male
MGP_PahariEiJ_G0030262	Sall2	100	88.469	ENSSTOG00000023637	SALL2	100	87.972	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0030262	Sall2	100	85.586	ENSJJAG00000000077	Sall2	100	85.288	Jaculus_jaculus
MGP_PahariEiJ_G0030262	Sall2	100	87.314	ENSLAFG00000032150	SALL2	100	86.918	Loxodonta_africana
MGP_PahariEiJ_G0030262	Sall2	100	88.206	ENSMFAG00000002687	SALL2	100	88.999	Macaca_fascicularis
MGP_PahariEiJ_G0030262	Sall2	81	86.842	ENSMMUG00000014997	SALL2	89	87.447	Macaca_mulatta
MGP_PahariEiJ_G0030262	Sall2	96	88.211	ENSMNEG00000030415	SALL2	93	89.038	Macaca_nemestrina
MGP_PahariEiJ_G0030262	Sall2	100	88.305	ENSMLEG00000036462	SALL2	100	89.098	Mandrillus_leucophaeus
MGP_PahariEiJ_G0030262	Sall2	100	91.964	ENSMAUG00000013964	Sall2	100	91.865	Mesocricetus_auratus
MGP_PahariEiJ_G0030262	Sall2	100	88.370	ENSMICG00000046438	SALL2	100	88.867	Microcebus_murinus
MGP_PahariEiJ_G0030262	Sall2	100	91.036	ENSMOCG00000003410	Sall2	100	91.036	Microtus_ochrogaster
MGP_PahariEiJ_G0030262	Sall2	99	74.585	ENSMODG00000006068	SALL2	99	74.585	Monodelphis_domestica
MGP_PahariEiJ_G0030262	Sall2	100	98.008	MGP_CAROLIEiJ_G0019241	Sall2	100	98.008	Mus_caroli
MGP_PahariEiJ_G0030262	Sall2	100	98.207	ENSMUSG00000049532	Sall2	100	98.207	Mus_musculus
MGP_PahariEiJ_G0030262	Sall2	100	98.108	MGP_SPRETEiJ_G0020133	Sall2	100	98.108	Mus_spretus
MGP_PahariEiJ_G0030262	Sall2	94	85.595	ENSMPUG00000000199	SALL2	87	85.908	Mustela_putorius_furo
MGP_PahariEiJ_G0030262	Sall2	100	85.899	ENSMLUG00000009185	SALL2	99	86.197	Myotis_lucifugus
MGP_PahariEiJ_G0030262	Sall2	100	89.374	ENSNGAG00000014258	Sall2	100	88.966	Nannospalax_galili
MGP_PahariEiJ_G0030262	Sall2	100	87.698	ENSNLEG00000014602	SALL2	100	88.095	Nomascus_leucogenys
MGP_PahariEiJ_G0030262	Sall2	91	76.022	ENSMEUG00000000526	SALL2	100	76.237	Notamacropus_eugenii
MGP_PahariEiJ_G0030262	Sall2	100	86.879	ENSODEG00000001454	SALL2	100	86.978	Octodon_degus
MGP_PahariEiJ_G0030262	Sall2	100	84.200	ENSOCUG00000027464	SALL2	100	84.946	Oryctolagus_cuniculus
MGP_PahariEiJ_G0030262	Sall2	100	89.286	ENSOGAG00000031464	SALL2	100	88.889	Otolemur_garnettii
MGP_PahariEiJ_G0030262	Sall2	100	85.473	ENSOARG00000019612	SALL2	100	85.572	Ovis_aries
MGP_PahariEiJ_G0030262	Sall2	100	88.183	ENSPPAG00000038242	SALL2	100	88.977	Pan_paniscus
MGP_PahariEiJ_G0030262	Sall2	100	87.611	ENSPPRG00000005572	SALL2	100	86.819	Panthera_pardus
MGP_PahariEiJ_G0030262	Sall2	100	85.020	ENSPTIG00000018399	SALL2	100	84.226	Panthera_tigris_altaica
MGP_PahariEiJ_G0030262	Sall2	100	88.183	ENSPTRG00000006128	SALL2	100	88.977	Pan_troglodytes
MGP_PahariEiJ_G0030262	Sall2	100	88.305	ENSPANG00000020006	SALL2	100	88.999	Papio_anubis
MGP_PahariEiJ_G0030262	Sall2	100	93.162	ENSPEMG00000022293	Sall2	100	93.756	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0030262	Sall2	94	87.566	ENSPPYG00000005600	SALL2	91	88.409	Pongo_abelii
MGP_PahariEiJ_G0030262	Sall2	89	84.650	ENSPCAG00000006689	SALL2	89	84.427	Procavia_capensis
MGP_PahariEiJ_G0030262	Sall2	100	88.370	ENSPCOG00000017266	SALL2	100	88.668	Propithecus_coquereli
MGP_PahariEiJ_G0030262	Sall2	100	83.135	ENSPVAG00000000277	SALL2	100	83.135	Pteropus_vampyrus
MGP_PahariEiJ_G0030262	Sall2	100	95.817	ENSRNOG00000013287	Sall2	100	95.120	Rattus_norvegicus
MGP_PahariEiJ_G0030262	Sall2	86	86.993	ENSRBIG00000009332	SALL2	100	95.833	Rhinopithecus_bieti
MGP_PahariEiJ_G0030262	Sall2	100	79.584	ENSRROG00000035352	SALL2	100	81.169	Rhinopithecus_roxellana
MGP_PahariEiJ_G0030262	Sall2	100	87.413	ENSSBOG00000028539	SALL2	100	88.404	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0030262	Sall2	98	72.754	ENSSHAG00000009219	SALL2	98	72.854	Sarcophilus_harrisii
MGP_PahariEiJ_G0030262	Sall2	54	70.344	ENSSPUG00000010045	SALL2	53	70.036	Sphenodon_punctatus
MGP_PahariEiJ_G0030262	Sall2	96	83.801	ENSSSCG00000022705	SALL2	89	83.904	Sus_scrofa
MGP_PahariEiJ_G0030262	Sall2	100	85.274	ENSTTRG00000012842	SALL2	100	85.672	Tursiops_truncatus
MGP_PahariEiJ_G0030262	Sall2	90	85.447	ENSUAMG00000028082	SALL2	87	85.998	Ursus_americanus
MGP_PahariEiJ_G0030262	Sall2	100	82.755	ENSUMAG00000004963	SALL2	100	83.053	Ursus_maritimus