EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0030355 (Gene tree)
Gene ID: 110325597
Gene Symbol: Rnf17
Alias: MMIP-2
Full Name: ring finger protein 17
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Plus strand
Length: 121495 bases
Position: chr8:47459481-47580975
Accession: 110325597
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0085038	TUDOR	PF00567.24	7.4e-84	1	5
MGP_PahariEiJ_P0085038	TUDOR	PF00567.24	7.4e-84	2	5
MGP_PahariEiJ_P0085038	TUDOR	PF00567.24	7.4e-84	3	5
MGP_PahariEiJ_P0085038	TUDOR	PF00567.24	7.4e-84	4	5
MGP_PahariEiJ_P0085038	TUDOR	PF00567.24	7.4e-84	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0085038	-	5148	XM_021203685	MGP_PahariEiJ_P0085038	1640 (aa)	XP_021059344	UPI000A3115E3

Gene Model

Click here to download MGP_PahariEiJ_G0030355's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0030355's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0030355	Rnf17	100	73.881	ENSG00000132972	RNF17	99	80.094	Homo_sapiens
MGP_PahariEiJ_G0030355	Rnf17	85	31.852	ENSAPOG00000017034	rnf17	75	35.658	Acanthochromis_polyacanthus
MGP_PahariEiJ_G0030355	Rnf17	100	76.211	ENSAMEG00000017340	RNF17	100	76.211	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0030355	Rnf17	99	32.576	ENSAOCG00000018283	rnf17	99	32.579	Amphiprion_ocellaris
MGP_PahariEiJ_G0030355	Rnf17	73	35.260	ENSAPEG00000022338	rnf17	83	35.260	Amphiprion_percula
MGP_PahariEiJ_G0030355	Rnf17	71	35.468	ENSATEG00000002067	rnf17	97	32.734	Anabas_testudineus
MGP_PahariEiJ_G0030355	Rnf17	88	48.603	ENSAPLG00000003969	RNF17	100	48.807	Anas_platyrhynchos
MGP_PahariEiJ_G0030355	Rnf17	91	46.403	ENSACAG00000001418	RNF17	92	46.403	Anolis_carolinensis
MGP_PahariEiJ_G0030355	Rnf17	92	70.925	ENSANAG00000029969	RNF17	95	70.925	Aotus_nancymaae
MGP_PahariEiJ_G0030355	Rnf17	90	34.068	ENSACLG00000018279	rnf17	88	34.474	Astatotilapia_calliptera
MGP_PahariEiJ_G0030355	Rnf17	88	34.600	ENSAMXG00000011002	rnf17	97	34.600	Astyanax_mexicanus
MGP_PahariEiJ_G0030355	Rnf17	53	77.003	ENSBTAG00000000278	RNF17	100	77.003	Bos_taurus
MGP_PahariEiJ_G0030355	Rnf17	100	72.612	ENSCJAG00000018937	RNF17	100	73.185	Callithrix_jacchus
MGP_PahariEiJ_G0030355	Rnf17	98	76.143	ENSCAFG00000007418	RNF17	100	79.400	Canis_familiaris
MGP_PahariEiJ_G0030355	Rnf17	54	73.591	ENSCAFG00020002919	-	100	73.739	Canis_lupus_dingo
MGP_PahariEiJ_G0030355	Rnf17	92	78.603	ENSCHIG00000026716	RNF17	99	78.455	Capra_hircus
MGP_PahariEiJ_G0030355	Rnf17	97	72.812	ENSTSYG00000000365	RNF17	99	72.812	Carlito_syrichta
MGP_PahariEiJ_G0030355	Rnf17	82	67.052	ENSCAPG00000012908	RNF17	99	67.052	Cavia_aperea
MGP_PahariEiJ_G0030355	Rnf17	100	72.656	ENSCCAG00000026725	RNF17	99	73.185	Cebus_capucinus
MGP_PahariEiJ_G0030355	Rnf17	100	73.277	ENSCATG00000040352	RNF17	100	74.887	Cercocebus_atys
MGP_PahariEiJ_G0030355	Rnf17	100	76.156	ENSCLAG00000004127	RNF17	100	76.156	Chinchilla_lanigera
MGP_PahariEiJ_G0030355	Rnf17	100	73.337	ENSCSAG00000018019	RNF17	100	73.337	Chlorocebus_sabaeus
MGP_PahariEiJ_G0030355	Rnf17	90	82.203	ENSCHOG00000013310	RNF17	91	82.203	Choloepus_hoffmanni
MGP_PahariEiJ_G0030355	Rnf17	92	56.870	ENSCPBG00000020920	RNF17	96	57.455	Chrysemys_picta_bellii
MGP_PahariEiJ_G0030355	Rnf17	99	72.777	ENSCANG00000032927	RNF17	99	74.812	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0030355	Rnf17	100	90.195	ENSCGRG00001022658	Rnf17	100	90.195	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0030355	Rnf17	100	90.195	ENSCGRG00000009924	Rnf17	100	90.195	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0030355	Rnf17	79	34.305	ENSCSEG00000008626	rnf17	84	34.305	Cynoglossus_semilaevis
MGP_PahariEiJ_G0030355	Rnf17	68	32.916	ENSCVAG00000017008	rnf17	84	32.916	Cyprinodon_variegatus
MGP_PahariEiJ_G0030355	Rnf17	97	31.579	ENSDARG00000056387	rnf17	91	34.307	Danio_rerio
MGP_PahariEiJ_G0030355	Rnf17	99	75.303	ENSDNOG00000006115	RNF17	99	75.303	Dasypus_novemcinctus
MGP_PahariEiJ_G0030355	Rnf17	73	87.500	ENSETEG00000017874	-	73	87.500	Echinops_telfairi
MGP_PahariEiJ_G0030355	Rnf17	100	77.744	ENSECAG00000017152	RNF17	99	77.744	Equus_caballus
MGP_PahariEiJ_G0030355	Rnf17	83	64.481	ENSEEUG00000000332	RNF17	90	64.481	Erinaceus_europaeus
MGP_PahariEiJ_G0030355	Rnf17	87	35.686	ENSELUG00000005626	rnf17	89	35.686	Esox_lucius
MGP_PahariEiJ_G0030355	Rnf17	100	76.407	ENSFCAG00000004914	RNF17	100	77.860	Felis_catus
MGP_PahariEiJ_G0030355	Rnf17	86	50.000	ENSFALG00000008766	RNF17	90	50.943	Ficedula_albicollis
MGP_PahariEiJ_G0030355	Rnf17	100	75.257	ENSFDAG00000017857	RNF17	100	75.257	Fukomys_damarensis
MGP_PahariEiJ_G0030355	Rnf17	97	30.839	ENSFHEG00000014822	rnf17	98	30.561	Fundulus_heteroclitus
MGP_PahariEiJ_G0030355	Rnf17	52	37.681	ENSGMOG00000015560	-	97	37.681	Gadus_morhua
MGP_PahariEiJ_G0030355	Rnf17	73	33.499	ENSGAFG00000004463	rnf17	89	33.635	Gambusia_affinis
MGP_PahariEiJ_G0030355	Rnf17	92	54.750	ENSGAGG00000016999	RNF17	91	55.112	Gopherus_agassizii
MGP_PahariEiJ_G0030355	Rnf17	100	74.002	ENSGGOG00000014491	RNF17	100	78.539	Gorilla_gorilla
MGP_PahariEiJ_G0030355	Rnf17	97	30.977	ENSHBUG00000003554	rnf17	88	34.395	Haplochromis_burtoni
MGP_PahariEiJ_G0030355	Rnf17	100	75.985	ENSHGLG00000007270	RNF17	100	75.985	Heterocephalus_glaber_female
MGP_PahariEiJ_G0030355	Rnf17	100	75.864	ENSHGLG00100017393	RNF17	100	75.864	Heterocephalus_glaber_male
MGP_PahariEiJ_G0030355	Rnf17	62	41.304	ENSHCOG00000017676	rnf17	78	41.304	Hippocampus_comes
MGP_PahariEiJ_G0030355	Rnf17	73	35.314	ENSIPUG00000001087	rnf17	80	35.314	Ictalurus_punctatus
MGP_PahariEiJ_G0030355	Rnf17	53	71.958	ENSSTOG00000011255	-	100	71.958	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0030355	Rnf17	100	80.073	ENSJJAG00000016584	Rnf17	100	80.073	Jaculus_jaculus
MGP_PahariEiJ_G0030355	Rnf17	90	34.477	ENSKMAG00000013403	rnf17	89	34.634	Kryptolebias_marmoratus
MGP_PahariEiJ_G0030355	Rnf17	86	30.785	ENSLBEG00000014910	rnf17	93	30.727	Labrus_bergylta
MGP_PahariEiJ_G0030355	Rnf17	83	46.923	ENSLACG00000000323	RNF17	99	46.923	Latimeria_chalumnae
MGP_PahariEiJ_G0030355	Rnf17	99	30.000	ENSLOCG00000010768	rnf17	99	30.173	Lepisosteus_oculatus
MGP_PahariEiJ_G0030355	Rnf17	100	73.398	ENSMFAG00000032388	RNF17	100	74.981	Macaca_fascicularis
MGP_PahariEiJ_G0030355	Rnf17	100	74.547	ENSMMUG00000014610	RNF17	100	77.844	Macaca_mulatta
MGP_PahariEiJ_G0030355	Rnf17	100	73.337	ENSMNEG00000011234	RNF17	100	77.769	Macaca_nemestrina
MGP_PahariEiJ_G0030355	Rnf17	100	73.096	ENSMLEG00000030227	RNF17	100	74.757	Mandrillus_leucophaeus
MGP_PahariEiJ_G0030355	Rnf17	73	33.693	ENSMAMG00000020403	rnf17	86	33.692	Mastacembelus_armatus
MGP_PahariEiJ_G0030355	Rnf17	90	34.146	ENSMZEG00005019166	rnf17	88	34.556	Maylandia_zebra
MGP_PahariEiJ_G0030355	Rnf17	76	49.723	ENSMGAG00000015138	RNF17	100	49.723	Meleagris_gallopavo
MGP_PahariEiJ_G0030355	Rnf17	99	86.220	ENSMAUG00000004788	Rnf17	99	86.220	Mesocricetus_auratus
MGP_PahariEiJ_G0030355	Rnf17	100	76.649	ENSMICG00000010364	RNF17	100	76.649	Microcebus_murinus
MGP_PahariEiJ_G0030355	Rnf17	59	88.799	ENSMOCG00000011818	-	100	88.799	Microtus_ochrogaster
MGP_PahariEiJ_G0030355	Rnf17	73	41.727	ENSMMOG00000019514	rnf17	82	41.727	Mola_mola
MGP_PahariEiJ_G0030355	Rnf17	99	66.198	ENSMODG00000007827	RNF17	98	66.018	Monodelphis_domestica
MGP_PahariEiJ_G0030355	Rnf17	85	31.997	ENSMALG00000016943	rnf17	94	31.901	Monopterus_albus
MGP_PahariEiJ_G0030355	Rnf17	100	95.976	MGP_CAROLIEiJ_G0019337	Rnf17	100	95.976	Mus_caroli
MGP_PahariEiJ_G0030355	Rnf17	100	95.488	ENSMUSG00000000365	Rnf17	100	95.488	Mus_musculus
MGP_PahariEiJ_G0030355	Rnf17	100	95.366	MGP_SPRETEiJ_G0020228	Rnf17	100	95.366	Mus_spretus
MGP_PahariEiJ_G0030355	Rnf17	100	76.653	ENSMPUG00000013305	RNF17	100	76.653	Mustela_putorius_furo
MGP_PahariEiJ_G0030355	Rnf17	100	75.227	ENSMLUG00000003903	RNF17	100	75.227	Myotis_lucifugus
MGP_PahariEiJ_G0030355	Rnf17	100	81.779	ENSNGAG00000013553	Rnf17	100	81.779	Nannospalax_galili
MGP_PahariEiJ_G0030355	Rnf17	73	35.369	ENSNBRG00000012006	rnf17	83	35.369	Neolamprologus_brichardi
MGP_PahariEiJ_G0030355	Rnf17	100	73.096	ENSNLEG00000013780	RNF17	100	77.695	Nomascus_leucogenys
MGP_PahariEiJ_G0030355	Rnf17	67	67.123	ENSMEUG00000003276	-	61	67.123	Notamacropus_eugenii
MGP_PahariEiJ_G0030355	Rnf17	88	67.966	ENSOPRG00000016743	-	88	67.966	Ochotona_princeps
MGP_PahariEiJ_G0030355	Rnf17	53	70.852	ENSODEG00000005443	-	100	70.852	Octodon_degus
MGP_PahariEiJ_G0030355	Rnf17	90	34.089	ENSONIG00000015746	rnf17	99	34.747	Oreochromis_niloticus
MGP_PahariEiJ_G0030355	Rnf17	100	76.410	ENSOCUG00000007384	RNF17	100	76.349	Oryctolagus_cuniculus
MGP_PahariEiJ_G0030355	Rnf17	73	35.961	ENSORLG00000012818	rnf17	84	35.961	Oryzias_latipes
MGP_PahariEiJ_G0030355	Rnf17	87	35.802	ENSORLG00020009879	-	89	36.043	Oryzias_latipes_hni
MGP_PahariEiJ_G0030355	Rnf17	87	35.632	ENSORLG00015013027	-	89	35.954	Oryzias_latipes_hsok
MGP_PahariEiJ_G0030355	Rnf17	66	33.333	ENSOMEG00000009891	rnf17	85	33.333	Oryzias_melastigma
MGP_PahariEiJ_G0030355	Rnf17	100	73.535	ENSOGAG00000014803	RNF17	100	73.535	Otolemur_garnettii
MGP_PahariEiJ_G0030355	Rnf17	98	76.847	ENSOARG00000014641	RNF17	99	76.723	Ovis_aries
MGP_PahariEiJ_G0030355	Rnf17	93	78.163	ENSPPAG00000028779	RNF17	100	78.163	Pan_paniscus
MGP_PahariEiJ_G0030355	Rnf17	100	76.044	ENSPPRG00000009230	RNF17	100	77.563	Panthera_pardus
MGP_PahariEiJ_G0030355	Rnf17	100	76.044	ENSPTIG00000001738	RNF17	100	77.712	Panthera_tigris_altaica
MGP_PahariEiJ_G0030355	Rnf17	100	73.700	ENSPTRG00000005713	RNF17	100	78.087	Pan_troglodytes
MGP_PahariEiJ_G0030355	Rnf17	100	73.337	ENSPANG00000007640	RNF17	100	77.869	Papio_anubis
MGP_PahariEiJ_G0030355	Rnf17	76	36.192	ENSPKIG00000001648	rnf17	90	36.773	Paramormyrops_kingsleyae
MGP_PahariEiJ_G0030355	Rnf17	73	60.412	ENSPSIG00000011245	RNF17	100	60.576	Pelodiscus_sinensis
MGP_PahariEiJ_G0030355	Rnf17	100	90.195	ENSPEMG00000008693	Rnf17	100	90.195	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0030355	Rnf17	63	65.615	ENSPCIG00000009190	-	95	65.615	Phascolarctos_cinereus
MGP_PahariEiJ_G0030355	Rnf17	90	33.824	ENSPFOG00000007124	rnf17	87	34.337	Poecilia_formosa
MGP_PahariEiJ_G0030355	Rnf17	97	31.174	ENSPLAG00000006198	rnf17	98	30.962	Poecilia_latipinna
MGP_PahariEiJ_G0030355	Rnf17	97	31.425	ENSPMEG00000022432	rnf17	98	31.142	Poecilia_mexicana
MGP_PahariEiJ_G0030355	Rnf17	73	42.754	ENSPREG00000001414	rnf17	78	42.754	Poecilia_reticulata
MGP_PahariEiJ_G0030355	Rnf17	100	73.881	ENSPPYG00000005215	RNF17	100	73.881	Pongo_abelii
MGP_PahariEiJ_G0030355	Rnf17	73	84.211	ENSPCAG00000002665	RNF17	76	84.211	Procavia_capensis
MGP_PahariEiJ_G0030355	Rnf17	91	60.784	ENSPCOG00000020211	RNF17	95	60.784	Propithecus_coquereli
MGP_PahariEiJ_G0030355	Rnf17	100	66.235	ENSPVAG00000013021	RNF17	100	66.235	Pteropus_vampyrus
MGP_PahariEiJ_G0030355	Rnf17	73	35.561	ENSPNAG00000027505	rnf17	85	35.638	Pygocentrus_nattereri
MGP_PahariEiJ_G0030355	Rnf17	100	91.890	ENSRNOG00000008059	Rnf17	100	91.890	Rattus_norvegicus
MGP_PahariEiJ_G0030355	Rnf17	100	71.765	ENSRBIG00000027010	RNF17	100	74.305	Rhinopithecus_bieti
MGP_PahariEiJ_G0030355	Rnf17	100	72.612	ENSRROG00000022801	RNF17	100	77.177	Rhinopithecus_roxellana
MGP_PahariEiJ_G0030355	Rnf17	99	72.950	ENSSBOG00000021661	RNF17	99	73.926	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0030355	Rnf17	99	65.954	ENSSHAG00000005609	RNF17	100	65.576	Sarcophilus_harrisii
MGP_PahariEiJ_G0030355	Rnf17	73	35.497	ENSSFOG00015023037	rnf17	89	35.415	Scleropages_formosus
MGP_PahariEiJ_G0030355	Rnf17	89	31.254	ENSSMAG00000007429	rnf17	74	34.907	Scophthalmus_maximus
MGP_PahariEiJ_G0030355	Rnf17	70	33.860	ENSSDUG00000013530	rnf17	77	34.760	Seriola_dumerili
MGP_PahariEiJ_G0030355	Rnf17	89	31.320	ENSSLDG00000019577	rnf17	75	35.222	Seriola_lalandi_dorsalis
MGP_PahariEiJ_G0030355	Rnf17	100	69.863	ENSSARG00000003016	RNF17	94	69.863	Sorex_araneus
MGP_PahariEiJ_G0030355	Rnf17	87	50.937	ENSSPUG00000008917	RNF17	95	50.937	Sphenodon_punctatus
MGP_PahariEiJ_G0030355	Rnf17	69	34.026	ENSSPAG00000001925	rnf17	76	34.335	Stegastes_partitus
MGP_PahariEiJ_G0030355	Rnf17	100	71.662	ENSSSCG00000009572	RNF17	100	76.387	Sus_scrofa
MGP_PahariEiJ_G0030355	Rnf17	52	53.198	ENSTGUG00000011267	-	100	53.198	Taeniopygia_guttata
MGP_PahariEiJ_G0030355	Rnf17	76	32.994	ENSTRUG00000015498	rnf17	77	33.091	Takifugu_rubripes
MGP_PahariEiJ_G0030355	Rnf17	73	34.048	ENSTNIG00000015681	rnf17	100	34.048	Tetraodon_nigroviridis
MGP_PahariEiJ_G0030355	Rnf17	100	59.906	ENSTBEG00000000282	RNF17	100	59.906	Tupaia_belangeri
MGP_PahariEiJ_G0030355	Rnf17	99	68.926	ENSTTRG00000012698	RNF17	99	68.682	Tursiops_truncatus
MGP_PahariEiJ_G0030355	Rnf17	50	84.647	ENSUMAG00000013953	-	100	71.217	Ursus_maritimus
MGP_PahariEiJ_G0030355	Rnf17	83	88.732	ENSVPAG00000011388	RNF17	85	88.732	Vicugna_pacos
MGP_PahariEiJ_G0030355	Rnf17	95	82.726	ENSVVUG00000006226	RNF17	100	82.812	Vulpes_vulpes
MGP_PahariEiJ_G0030355	Rnf17	70	41.126	ENSXETG00000034020	RNF17	100	44.208	Xenopus_tropicalis
MGP_PahariEiJ_G0030355	Rnf17	67	33.906	ENSXCOG00000018295	rnf17	76	34.105	Xiphophorus_couchianus
MGP_PahariEiJ_G0030355	Rnf17	67	34.417	ENSXMAG00000014747	rnf17	77	34.455	Xiphophorus_maculatus