EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0030385 (Gene tree)
Gene ID: 110325326
Gene Symbol: Setdb2
Alias: KMT1F|LOC239122
Full Name: SET domain bifurcated 2
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Minus strand
Length: 47590 bases
Position: chr8:50459661-50507250
Accession: 110325326
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0085119	MBD	PF01429.19	3.5e-07	1	1
MGP_PahariEiJ_P0085120	MBD	PF01429.19	3.6e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0085119	-	3082	XM_021203251	MGP_PahariEiJ_P0085119	697 (aa)	XP_021058910	UPI000A30C128
MGP_PahariEiJ_T0085121	-	720	-	-	- (aa)	-	-
MGP_PahariEiJ_T0085120	-	3121	-	MGP_PahariEiJ_P0085120	713 (aa)	XP_021058909	UPI000A313C60
MGP_PahariEiJ_T0085123	-	408	-	-	- (aa)	-	-
MGP_PahariEiJ_T0085122	-	1801	-	MGP_PahariEiJ_P0085122	140 (aa)	-	-

Gene Model

Click here to download MGP_PahariEiJ_G0030385's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0030385's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0030385	Setdb2	100	68.644	ENSG00000136169	SETDB2	100	68.644	Homo_sapiens
MGP_PahariEiJ_G0030385	Setdb2	56	53.763	ENSAPOG00000020220	-	88	53.763	Acanthochromis_polyacanthus
MGP_PahariEiJ_G0030385	Setdb2	99	66.619	ENSAMEG00000003443	SETDB2	70	66.619	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0030385	Setdb2	88	33.251	ENSACIG00000009349	-	92	34.577	Amphilophus_citrinellus
MGP_PahariEiJ_G0030385	Setdb2	73	45.000	ENSAOCG00000006560	-	82	43.200	Amphiprion_ocellaris
MGP_PahariEiJ_G0030385	Setdb2	73	41.353	ENSAPEG00000009529	-	86	40.559	Amphiprion_percula
MGP_PahariEiJ_G0030385	Setdb2	51	54.118	ENSATEG00000008915	-	79	38.225	Anabas_testudineus
MGP_PahariEiJ_G0030385	Setdb2	99	45.198	ENSAPLG00000009061	SETDB2	100	45.198	Anas_platyrhynchos
MGP_PahariEiJ_G0030385	Setdb2	100	42.340	ENSACAG00000014036	SETDB2	100	42.340	Anolis_carolinensis
MGP_PahariEiJ_G0030385	Setdb2	90	67.347	ENSANAG00000028107	SETDB2	100	67.347	Aotus_nancymaae
MGP_PahariEiJ_G0030385	Setdb2	70	48.980	ENSACLG00000004046	-	77	48.980	Astatotilapia_calliptera
MGP_PahariEiJ_G0030385	Setdb2	70	60.215	ENSAMXG00000016092	setdb2	80	60.215	Astyanax_mexicanus
MGP_PahariEiJ_G0030385	Setdb2	100	64.873	ENSBTAG00000007329	SETDB2	100	64.873	Bos_taurus
MGP_PahariEiJ_G0030385	Setdb2	100	67.751	ENSCJAG00000008864	SETDB2	100	67.751	Callithrix_jacchus
MGP_PahariEiJ_G0030385	Setdb2	99	64.326	ENSCAFG00000004341	SETDB2	100	64.326	Canis_familiaris
MGP_PahariEiJ_G0030385	Setdb2	100	65.390	ENSCAFG00020020283	SETDB2	100	65.390	Canis_lupus_dingo
MGP_PahariEiJ_G0030385	Setdb2	100	65.014	ENSCHIG00000014895	SETDB2	100	65.014	Capra_hircus
MGP_PahariEiJ_G0030385	Setdb2	99	66.950	ENSTSYG00000014051	SETDB2	99	66.950	Carlito_syrichta
MGP_PahariEiJ_G0030385	Setdb2	66	62.741	ENSCAPG00000014168	-	99	62.741	Cavia_aperea
MGP_PahariEiJ_G0030385	Setdb2	92	61.868	ENSCPOG00000002194	SETDB2	97	61.868	Cavia_porcellus
MGP_PahariEiJ_G0030385	Setdb2	100	67.893	ENSCCAG00000031604	SETDB2	100	67.893	Cebus_capucinus
MGP_PahariEiJ_G0030385	Setdb2	100	67.655	ENSCATG00000002055	SETDB2	100	67.655	Cercocebus_atys
MGP_PahariEiJ_G0030385	Setdb2	100	63.508	ENSCLAG00000007348	SETDB2	100	63.508	Chinchilla_lanigera
MGP_PahariEiJ_G0030385	Setdb2	100	67.327	ENSCSAG00000017713	SETDB2	100	67.327	Chlorocebus_sabaeus
MGP_PahariEiJ_G0030385	Setdb2	90	43.692	ENSCPBG00000008524	SETDB2	92	42.357	Chrysemys_picta_bellii
MGP_PahariEiJ_G0030385	Setdb2	99	63.143	ENSCANG00000033506	SETDB2	100	62.968	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0030385	Setdb2	100	79.513	ENSCGRG00001011194	Setdb2	100	79.513	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0030385	Setdb2	100	79.513	ENSCGRG00000000801	Setdb2	100	79.513	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0030385	Setdb2	89	35.338	ENSCVAG00000004116	-	95	35.181	Cyprinodon_variegatus
MGP_PahariEiJ_G0030385	Setdb2	59	62.295	ENSDARG00000101462	setdb2	70	62.295	Danio_rerio
MGP_PahariEiJ_G0030385	Setdb2	100	63.750	ENSDNOG00000033679	SETDB2	100	63.750	Dasypus_novemcinctus
MGP_PahariEiJ_G0030385	Setdb2	99	64.316	ENSDORG00000026163	Setdb2	100	64.316	Dipodomys_ordii
MGP_PahariEiJ_G0030385	Setdb2	81	68.827	ENSETEG00000004821	SETDB2	81	68.827	Echinops_telfairi
MGP_PahariEiJ_G0030385	Setdb2	100	68.130	ENSEASG00005017285	SETDB2	100	68.130	Equus_asinus_asinus
MGP_PahariEiJ_G0030385	Setdb2	100	68.272	ENSECAG00000020357	SETDB2	100	68.272	Equus_caballus
MGP_PahariEiJ_G0030385	Setdb2	99	59.887	ENSEEUG00000011247	SETDB2	100	59.887	Erinaceus_europaeus
MGP_PahariEiJ_G0030385	Setdb2	69	58.511	ENSELUG00000024242	-	76	58.511	Esox_lucius
MGP_PahariEiJ_G0030385	Setdb2	100	66.289	ENSFCAG00000012034	SETDB2	100	66.289	Felis_catus
MGP_PahariEiJ_G0030385	Setdb2	99	44.065	ENSFALG00000008379	SETDB2	97	44.065	Ficedula_albicollis
MGP_PahariEiJ_G0030385	Setdb2	99	64.910	ENSFDAG00000017408	SETDB2	100	64.910	Fukomys_damarensis
MGP_PahariEiJ_G0030385	Setdb2	99	43.497	ENSGALG00000017006	SETDB2	97	43.539	Gallus_gallus
MGP_PahariEiJ_G0030385	Setdb2	89	33.494	ENSGAFG00000000077	-	95	33.494	Gambusia_affinis
MGP_PahariEiJ_G0030385	Setdb2	89	32.658	ENSGACG00000015463	-	95	32.911	Gasterosteus_aculeatus
MGP_PahariEiJ_G0030385	Setdb2	99	48.266	ENSGAGG00000014099	SETDB2	96	48.266	Gopherus_agassizii
MGP_PahariEiJ_G0030385	Setdb2	100	68.785	ENSGGOG00000016016	SETDB2	100	68.785	Gorilla_gorilla
MGP_PahariEiJ_G0030385	Setdb2	68	52.381	ENSHBUG00000001477	-	75	52.381	Haplochromis_burtoni
MGP_PahariEiJ_G0030385	Setdb2	100	65.113	ENSHGLG00000003820	SETDB2	99	65.113	Heterocephalus_glaber_female
MGP_PahariEiJ_G0030385	Setdb2	100	64.972	ENSHGLG00100008642	SETDB2	99	64.972	Heterocephalus_glaber_male
MGP_PahariEiJ_G0030385	Setdb2	69	52.632	ENSHCOG00000007071	-	80	52.632	Hippocampus_comes
MGP_PahariEiJ_G0030385	Setdb2	68	61.364	ENSIPUG00000011157	setdb2	79	61.364	Ictalurus_punctatus
MGP_PahariEiJ_G0030385	Setdb2	100	68.079	ENSSTOG00000002985	SETDB2	100	68.079	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0030385	Setdb2	99	67.192	ENSJJAG00000011079	Setdb2	99	67.192	Jaculus_jaculus
MGP_PahariEiJ_G0030385	Setdb2	68	51.136	ENSKMAG00000012100	-	99	31.841	Kryptolebias_marmoratus
MGP_PahariEiJ_G0030385	Setdb2	99	39.491	ENSLACG00000009640	SETDB2	100	37.922	Latimeria_chalumnae
MGP_PahariEiJ_G0030385	Setdb2	98	35.302	ENSLOCG00000009739	-	96	35.577	Lepisosteus_oculatus
MGP_PahariEiJ_G0030385	Setdb2	99	65.594	ENSLAFG00000012612	SETDB2	100	65.594	Loxodonta_africana
MGP_PahariEiJ_G0030385	Setdb2	100	67.655	ENSMFAG00000032631	SETDB2	100	67.655	Macaca_fascicularis
MGP_PahariEiJ_G0030385	Setdb2	100	67.655	ENSMMUG00000013473	SETDB2	100	67.655	Macaca_mulatta
MGP_PahariEiJ_G0030385	Setdb2	100	67.655	ENSMNEG00000037148	SETDB2	100	67.655	Macaca_nemestrina
MGP_PahariEiJ_G0030385	Setdb2	100	67.797	ENSMLEG00000043613	SETDB2	100	67.797	Mandrillus_leucophaeus
MGP_PahariEiJ_G0030385	Setdb2	69	56.522	ENSMAMG00000022781	-	80	56.522	Mastacembelus_armatus
MGP_PahariEiJ_G0030385	Setdb2	70	48.980	ENSMZEG00005012098	-	77	48.980	Maylandia_zebra
MGP_PahariEiJ_G0030385	Setdb2	99	45.262	ENSMGAG00000015017	SETDB2	100	45.262	Meleagris_gallopavo
MGP_PahariEiJ_G0030385	Setdb2	100	79.226	ENSMAUG00000012871	Setdb2	100	79.226	Mesocricetus_auratus
MGP_PahariEiJ_G0030385	Setdb2	100	65.912	ENSMICG00000012641	SETDB2	100	65.912	Microcebus_murinus
MGP_PahariEiJ_G0030385	Setdb2	100	74.319	ENSMOCG00000021987	Setdb2	100	74.319	Microtus_ochrogaster
MGP_PahariEiJ_G0030385	Setdb2	100	50.416	ENSMODG00000010929	SETDB2	100	50.416	Monodelphis_domestica
MGP_PahariEiJ_G0030385	Setdb2	68	54.023	ENSMALG00000001256	-	73	54.023	Monopterus_albus
MGP_PahariEiJ_G0030385	Setdb2	100	91.248	MGP_CAROLIEiJ_G0019367	Setdb2	100	91.248	Mus_caroli
MGP_PahariEiJ_G0030385	Setdb2	100	91.679	ENSMUSG00000071350	Setdb2	100	91.679	Mus_musculus
MGP_PahariEiJ_G0030385	Setdb2	100	91.679	MGP_SPRETEiJ_G0020259	Setdb2	100	91.679	Mus_spretus
MGP_PahariEiJ_G0030385	Setdb2	100	66.147	ENSMPUG00000018019	SETDB2	100	66.147	Mustela_putorius_furo
MGP_PahariEiJ_G0030385	Setdb2	99	64.622	ENSMLUG00000004378	SETDB2	99	64.622	Myotis_lucifugus
MGP_PahariEiJ_G0030385	Setdb2	100	73.820	ENSNGAG00000013911	Setdb2	100	73.820	Nannospalax_galili
MGP_PahariEiJ_G0030385	Setdb2	100	68.310	ENSNLEG00000003613	SETDB2	100	68.310	Nomascus_leucogenys
MGP_PahariEiJ_G0030385	Setdb2	93	44.898	ENSMEUG00000005220	-	100	44.898	Notamacropus_eugenii
MGP_PahariEiJ_G0030385	Setdb2	84	68.012	ENSOPRG00000012261	SETDB2	83	68.012	Ochotona_princeps
MGP_PahariEiJ_G0030385	Setdb2	72	42.609	ENSONIG00000009000	-	98	34.742	Oreochromis_niloticus
MGP_PahariEiJ_G0030385	Setdb2	99	48.948	ENSOANG00000015546	SETDB2	93	49.649	Ornithorhynchus_anatinus
MGP_PahariEiJ_G0030385	Setdb2	100	65.470	ENSOCUG00000003755	SETDB2	100	65.470	Oryctolagus_cuniculus
MGP_PahariEiJ_G0030385	Setdb2	69	52.809	ENSORLG00000001147	-	78	52.809	Oryzias_latipes
MGP_PahariEiJ_G0030385	Setdb2	89	32.840	ENSORLG00020006680	-	78	52.809	Oryzias_latipes_hni
MGP_PahariEiJ_G0030385	Setdb2	69	52.809	ENSORLG00015009952	-	78	52.809	Oryzias_latipes_hsok
MGP_PahariEiJ_G0030385	Setdb2	100	64.907	ENSOGAG00000005339	SETDB2	100	64.907	Otolemur_garnettii
MGP_PahariEiJ_G0030385	Setdb2	100	65.297	ENSOARG00000008487	SETDB2	100	65.297	Ovis_aries
MGP_PahariEiJ_G0030385	Setdb2	100	68.785	ENSPPAG00000039854	SETDB2	100	68.785	Pan_paniscus
MGP_PahariEiJ_G0030385	Setdb2	100	66.714	ENSPPRG00000000069	SETDB2	100	66.714	Panthera_pardus
MGP_PahariEiJ_G0030385	Setdb2	100	66.997	ENSPTIG00000006314	SETDB2	100	66.997	Panthera_tigris_altaica
MGP_PahariEiJ_G0030385	Setdb2	100	68.644	ENSPTRG00000005873	SETDB2	100	68.644	Pan_troglodytes
MGP_PahariEiJ_G0030385	Setdb2	100	67.655	ENSPANG00000017051	SETDB2	100	67.655	Papio_anubis
MGP_PahariEiJ_G0030385	Setdb2	95	34.351	ENSPKIG00000009795	-	98	34.351	Paramormyrops_kingsleyae
MGP_PahariEiJ_G0030385	Setdb2	99	44.906	ENSPSIG00000002200	SETDB2	95	44.906	Pelodiscus_sinensis
MGP_PahariEiJ_G0030385	Setdb2	100	52.712	ENSPCIG00000002912	SETDB2	100	52.712	Phascolarctos_cinereus
MGP_PahariEiJ_G0030385	Setdb2	68	54.444	ENSPFOG00000006673	-	77	54.444	Poecilia_formosa
MGP_PahariEiJ_G0030385	Setdb2	68	55.556	ENSPLAG00000016914	-	77	55.556	Poecilia_latipinna
MGP_PahariEiJ_G0030385	Setdb2	68	55.556	ENSPMEG00000003842	-	77	55.556	Poecilia_mexicana
MGP_PahariEiJ_G0030385	Setdb2	68	53.333	ENSPREG00000022531	-	77	53.333	Poecilia_reticulata
MGP_PahariEiJ_G0030385	Setdb2	100	68.220	ENSPPYG00000005368	SETDB2	100	68.220	Pongo_abelii
MGP_PahariEiJ_G0030385	Setdb2	59	94.118	ENSPCAG00000010230	-	58	94.118	Procavia_capensis
MGP_PahariEiJ_G0030385	Setdb2	93	67.927	ENSPCOG00000017644	SETDB2	99	67.927	Propithecus_coquereli
MGP_PahariEiJ_G0030385	Setdb2	100	62.674	ENSPVAG00000006911	SETDB2	100	62.674	Pteropus_vampyrus
MGP_PahariEiJ_G0030385	Setdb2	55	48.980	ENSPNYG00000023676	-	70	48.980	Pundamilia_nyererei
MGP_PahariEiJ_G0030385	Setdb2	70	55.882	ENSPNAG00000011459	setdb2	79	55.882	Pygocentrus_nattereri
MGP_PahariEiJ_G0030385	Setdb2	100	85.796	ENSRNOG00000021680	Setdb2	100	85.796	Rattus_norvegicus
MGP_PahariEiJ_G0030385	Setdb2	100	67.797	ENSRBIG00000006562	SETDB2	100	67.797	Rhinopithecus_bieti
MGP_PahariEiJ_G0030385	Setdb2	100	67.655	ENSRROG00000032499	SETDB2	100	67.655	Rhinopithecus_roxellana
MGP_PahariEiJ_G0030385	Setdb2	100	67.751	ENSSBOG00000023249	SETDB2	100	67.751	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0030385	Setdb2	100	52.820	ENSSHAG00000007281	SETDB2	100	52.820	Sarcophilus_harrisii
MGP_PahariEiJ_G0030385	Setdb2	69	63.636	ENSSFOG00015008204	-	76	63.636	Scleropages_formosus
MGP_PahariEiJ_G0030385	Setdb2	68	54.545	ENSSDUG00000002987	-	74	54.545	Seriola_dumerili
MGP_PahariEiJ_G0030385	Setdb2	51	55.682	ENSSLDG00000015081	-	73	55.682	Seriola_lalandi_dorsalis
MGP_PahariEiJ_G0030385	Setdb2	100	61.560	ENSSARG00000009926	SETDB2	100	61.560	Sorex_araneus
MGP_PahariEiJ_G0030385	Setdb2	71	40.741	ENSSPAG00000006869	-	98	35.062	Stegastes_partitus
MGP_PahariEiJ_G0030385	Setdb2	100	65.532	ENSSSCG00000009395	SETDB2	100	65.532	Sus_scrofa
MGP_PahariEiJ_G0030385	Setdb2	96	53.602	ENSTBEG00000008013	SETDB2	100	53.602	Tupaia_belangeri
MGP_PahariEiJ_G0030385	Setdb2	100	64.589	ENSTTRG00000012932	SETDB2	100	64.589	Tursiops_truncatus
MGP_PahariEiJ_G0030385	Setdb2	100	67.139	ENSUMAG00000018406	SETDB2	100	67.139	Ursus_maritimus
MGP_PahariEiJ_G0030385	Setdb2	100	62.869	ENSVPAG00000012019	SETDB2	100	62.869	Vicugna_pacos
MGP_PahariEiJ_G0030385	Setdb2	85	60.167	ENSVVUG00000028174	SETDB2	92	60.167	Vulpes_vulpes
MGP_PahariEiJ_G0030385	Setdb2	99	41.795	ENSXETG00000015666	setdb2	100	41.795	Xenopus_tropicalis
MGP_PahariEiJ_G0030385	Setdb2	52	54.444	ENSXMAG00000006323	-	65	54.444	Xiphophorus_maculatus