EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0030407 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Plus strand
Length: 90779 bases
Position: chr8:53277081-53367859
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0085170	RNase_H2-Ydr279	PF09468.10	1.8e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0085169	-	320	-	MGP_PahariEiJ_P0085169	53 (aa)	-	-
MGP_PahariEiJ_T0085170	-	1044	-	MGP_PahariEiJ_P0085170	347 (aa)	-	-
MGP_PahariEiJ_T0085171	-	507	-	MGP_PahariEiJ_P0085171	42 (aa)	-	-

Gene Model

Click here to download MGP_PahariEiJ_G0030407's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0030407's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0030407	-	100	65.429	ENSG00000136104	RNASEH2B	99	84.615	Homo_sapiens
MGP_PahariEiJ_G0030407	-	93	41.538	ENSAPOG00000010496	rnaseh2b	92	40.923	Acanthochromis_polyacanthus
MGP_PahariEiJ_G0030407	-	94	64.329	ENSAMEG00000012040	RNASEH2B	98	64.329	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0030407	-	87	37.500	ENSACIG00000021991	rnaseh2b	92	37.500	Amphilophus_citrinellus
MGP_PahariEiJ_G0030407	-	93	40.308	ENSAOCG00000013398	rnaseh2b	92	40.308	Amphiprion_ocellaris
MGP_PahariEiJ_G0030407	-	93	37.231	ENSAPEG00000006033	rnaseh2b	92	37.231	Amphiprion_percula
MGP_PahariEiJ_G0030407	-	92	42.679	ENSATEG00000008370	rnaseh2b	91	42.679	Anabas_testudineus
MGP_PahariEiJ_G0030407	-	86	51.178	ENSAPLG00000008955	RNASEH2B	99	51.447	Anas_platyrhynchos
MGP_PahariEiJ_G0030407	-	95	47.059	ENSACAG00000011679	RNASEH2B	100	46.176	Anolis_carolinensis
MGP_PahariEiJ_G0030407	-	100	65.143	ENSANAG00000020662	RNASEH2B	100	65.429	Aotus_nancymaae
MGP_PahariEiJ_G0030407	-	95	41.018	ENSACLG00000000467	rnaseh2b	95	41.018	Astatotilapia_calliptera
MGP_PahariEiJ_G0030407	-	89	42.258	ENSAMXG00000014351	rnaseh2b	87	40.645	Astyanax_mexicanus
MGP_PahariEiJ_G0030407	-	76	81.761	ENSBTAG00000020149	RNASEH2B	99	62.931	Bos_taurus
MGP_PahariEiJ_G0030407	-	98	65.205	ENSCJAG00000008585	-	99	65.205	Callithrix_jacchus
MGP_PahariEiJ_G0030407	-	82	58.885	ENSCJAG00000003822	-	92	58.885	Callithrix_jacchus
MGP_PahariEiJ_G0030407	-	99	60.058	ENSCAFG00000004295	RNASEH2B	99	60.058	Canis_familiaris
MGP_PahariEiJ_G0030407	-	97	62.647	ENSCAFG00020000250	RNASEH2B	98	62.647	Canis_lupus_dingo
MGP_PahariEiJ_G0030407	-	99	59.654	ENSCHIG00000018220	RNASEH2B	99	64.162	Capra_hircus
MGP_PahariEiJ_G0030407	-	80	51.799	ENSCHIG00000012982	-	84	51.799	Capra_hircus
MGP_PahariEiJ_G0030407	-	69	79.720	ENSTSYG00000031177	-	98	54.142	Carlito_syrichta
MGP_PahariEiJ_G0030407	-	94	59.146	ENSTSYG00000009176	-	93	62.805	Carlito_syrichta
MGP_PahariEiJ_G0030407	-	62	79.310	ENSCAPG00000009978	RNASEH2B	75	79.310	Cavia_aperea
MGP_PahariEiJ_G0030407	-	73	82.292	ENSCPOG00000032527	RNASEH2B	97	61.919	Cavia_porcellus
MGP_PahariEiJ_G0030407	-	99	64.928	ENSCCAG00000026979	RNASEH2B	99	64.912	Cebus_capucinus
MGP_PahariEiJ_G0030407	-	96	64.970	ENSCATG00000031336	RNASEH2B	83	64.970	Cercocebus_atys
MGP_PahariEiJ_G0030407	-	71	82.558	ENSCLAG00000003517	RNASEH2B	79	64.024	Chinchilla_lanigera
MGP_PahariEiJ_G0030407	-	97	65.192	ENSCSAG00000017701	RNASEH2B	91	65.192	Chlorocebus_sabaeus
MGP_PahariEiJ_G0030407	-	76	79.874	ENSCHOG00000013688	RNASEH2B	81	79.874	Choloepus_hoffmanni
MGP_PahariEiJ_G0030407	-	98	48.538	ENSCPBG00000008684	RNASEH2B	93	48.538	Chrysemys_picta_bellii
MGP_PahariEiJ_G0030407	-	95	34.226	ENSCING00000016454	-	95	34.125	Ciona_intestinalis
MGP_PahariEiJ_G0030407	-	100	66.000	ENSCANG00000041511	-	100	66.000	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0030407	-	100	72.701	ENSCGRG00001000611	Rnaseh2b	100	72.701	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0030407	-	100	72.701	ENSCGRG00000006077	Rnaseh2b	100	72.701	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0030407	-	90	38.580	ENSCSEG00000004910	rnaseh2b	93	38.291	Cynoglossus_semilaevis
MGP_PahariEiJ_G0030407	-	95	37.425	ENSCVAG00000005212	rnaseh2b	78	54.545	Cyprinodon_variegatus
MGP_PahariEiJ_G0030407	-	89	42.492	ENSDARG00000005128	rnaseh2b	87	41.905	Danio_rerio
MGP_PahariEiJ_G0030407	-	93	57.716	ENSDNOG00000049666	-	92	57.716	Dasypus_novemcinctus
MGP_PahariEiJ_G0030407	-	99	56.232	ENSDNOG00000034290	-	99	56.232	Dasypus_novemcinctus
MGP_PahariEiJ_G0030407	-	100	64.286	ENSDORG00000010708	Rnaseh2b	100	64.286	Dipodomys_ordii
MGP_PahariEiJ_G0030407	-	86	30.392	ENSEBUG00000005965	rnaseh2b	98	30.619	Eptatretus_burgeri
MGP_PahariEiJ_G0030407	-	100	62.571	ENSEASG00005017323	RNASEH2B	100	66.000	Equus_asinus_asinus
MGP_PahariEiJ_G0030407	-	100	62.571	ENSECAG00000014262	RNASEH2B	100	66.000	Equus_caballus
MGP_PahariEiJ_G0030407	-	96	40.059	ENSELUG00000019560	rnaseh2b	95	40.059	Esox_lucius
MGP_PahariEiJ_G0030407	-	94	59.819	ENSFCAG00000014257	RNASEH2B	90	62.918	Felis_catus
MGP_PahariEiJ_G0030407	-	90	51.111	ENSFALG00000008435	RNASEH2B	92	51.282	Ficedula_albicollis
MGP_PahariEiJ_G0030407	-	93	61.610	ENSFDAG00000009920	RNASEH2B	98	62.848	Fukomys_damarensis
MGP_PahariEiJ_G0030407	-	95	37.048	ENSFHEG00000012160	rnaseh2b	95	37.048	Fundulus_heteroclitus
MGP_PahariEiJ_G0030407	-	88	39.869	ENSGMOG00000016830	rnaseh2b	93	39.869	Gadus_morhua
MGP_PahariEiJ_G0030407	-	95	47.748	ENSGALG00000017015	RNASEH2B	99	48.127	Gallus_gallus
MGP_PahariEiJ_G0030407	-	90	38.978	ENSGAFG00000021222	rnaseh2b	53	55.828	Gambusia_affinis
MGP_PahariEiJ_G0030407	-	93	39.755	ENSGACG00000002821	rnaseh2b	92	39.755	Gasterosteus_aculeatus
MGP_PahariEiJ_G0030407	-	91	50.159	ENSGAGG00000014722	RNASEH2B	99	50.159	Gopherus_agassizii
MGP_PahariEiJ_G0030407	-	100	66.286	ENSGGOG00000001044	RNASEH2B	100	66.286	Gorilla_gorilla
MGP_PahariEiJ_G0030407	-	95	41.018	ENSHBUG00000006049	rnaseh2b	95	41.018	Haplochromis_burtoni
MGP_PahariEiJ_G0030407	-	93	60.802	ENSHGLG00100015953	RNASEH2B	97	64.198	Heterocephalus_glaber_male
MGP_PahariEiJ_G0030407	-	93	40.184	ENSHCOG00000003318	rnaseh2b	92	39.815	Hippocampus_comes
MGP_PahariEiJ_G0030407	-	90	42.994	ENSIPUG00000023815	rnaseh2b	88	40.694	Ictalurus_punctatus
MGP_PahariEiJ_G0030407	-	62	86.207	ENSSTOG00000015126	RNASEH2B	97	64.087	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0030407	-	94	64.832	ENSJJAG00000013335	Rnaseh2b	97	64.832	Jaculus_jaculus
MGP_PahariEiJ_G0030407	-	93	41.538	ENSKMAG00000002198	rnaseh2b	92	41.538	Kryptolebias_marmoratus
MGP_PahariEiJ_G0030407	-	93	42.424	ENSLBEG00000019331	rnaseh2b	92	42.424	Labrus_bergylta
MGP_PahariEiJ_G0030407	-	77	47.744	ENSLACG00000010782	RNASEH2B	65	62.346	Latimeria_chalumnae
MGP_PahariEiJ_G0030407	-	99	42.614	ENSLOCG00000009296	rnaseh2b	100	42.614	Lepisosteus_oculatus
MGP_PahariEiJ_G0030407	-	96	58.806	ENSLAFG00000030158	RNASEH2B	95	61.194	Loxodonta_africana
MGP_PahariEiJ_G0030407	-	100	65.143	ENSMFAG00000038464	-	100	65.143	Macaca_fascicularis
MGP_PahariEiJ_G0030407	-	100	58.286	ENSMMUG00000021746	RNASEH2B	100	58.286	Macaca_mulatta
MGP_PahariEiJ_G0030407	-	100	65.143	ENSMNEG00000030580	RNASEH2B	100	65.143	Macaca_nemestrina
MGP_PahariEiJ_G0030407	-	100	65.429	ENSMLEG00000043911	-	100	65.429	Mandrillus_leucophaeus
MGP_PahariEiJ_G0030407	-	90	41.905	ENSMAMG00000017109	rnaseh2b	89	41.905	Mastacembelus_armatus
MGP_PahariEiJ_G0030407	-	88	42.765	ENSMZEG00005021926	rnaseh2b	90	42.633	Maylandia_zebra
MGP_PahariEiJ_G0030407	-	86	49.329	ENSMGAG00000015025	RNASEH2B	95	49.679	Meleagris_gallopavo
MGP_PahariEiJ_G0030407	-	77	88.957	ENSMAUG00000016520	Rnaseh2b	88	88.957	Mesocricetus_auratus
MGP_PahariEiJ_G0030407	-	100	66.762	ENSMICG00000000528	RNASEH2B	100	67.049	Microcebus_murinus
MGP_PahariEiJ_G0030407	-	92	40.810	ENSMMOG00000019799	rnaseh2b	97	40.810	Mola_mola
MGP_PahariEiJ_G0030407	-	99	48.116	ENSMODG00000010775	RNASEH2B	99	48.116	Monodelphis_domestica
MGP_PahariEiJ_G0030407	-	99	39.306	ENSMALG00000004463	rnaseh2b	94	40.000	Monopterus_albus
MGP_PahariEiJ_G0030407	-	100	57.064	MGP_CAROLIEiJ_G0019389	Rnaseh2b	100	57.341	Mus_caroli
MGP_PahariEiJ_G0030407	-	100	67.036	ENSMUSG00000021932	Rnaseh2b	100	67.313	Mus_musculus
MGP_PahariEiJ_G0030407	-	76	59.091	ENSMPUG00000018010	RNASEH2B	94	59.091	Mustela_putorius_furo
MGP_PahariEiJ_G0030407	-	99	61.449	ENSMLUG00000004065	-	98	65.797	Myotis_lucifugus
MGP_PahariEiJ_G0030407	-	95	40.719	ENSNBRG00000003253	rnaseh2b	95	40.719	Neolamprologus_brichardi
MGP_PahariEiJ_G0030407	-	100	65.714	ENSNLEG00000003804	RNASEH2B	100	65.714	Nomascus_leucogenys
MGP_PahariEiJ_G0030407	-	92	51.097	ENSMEUG00000003665	RNASEH2B	97	51.097	Notamacropus_eugenii
MGP_PahariEiJ_G0030407	-	58	69.737	ENSODEG00000005412	-	95	52.500	Octodon_degus
MGP_PahariEiJ_G0030407	-	99	63.663	ENSODEG00000006793	-	98	64.535	Octodon_degus
MGP_PahariEiJ_G0030407	-	95	39.222	ENSONIG00000006657	rnaseh2b	95	40.120	Oreochromis_niloticus
MGP_PahariEiJ_G0030407	-	92	50.621	ENSOANG00000015537	RNASEH2B	99	50.621	Ornithorhynchus_anatinus
MGP_PahariEiJ_G0030407	-	99	62.609	ENSOCUG00000008904	RNASEH2B	96	62.609	Oryctolagus_cuniculus
MGP_PahariEiJ_G0030407	-	94	41.159	ENSORLG00000011850	rnaseh2b	95	41.159	Oryzias_latipes
MGP_PahariEiJ_G0030407	-	94	41.463	ENSORLG00020012081	rnaseh2b	95	41.463	Oryzias_latipes_hni
MGP_PahariEiJ_G0030407	-	94	41.463	ENSORLG00015015468	rnaseh2b	95	41.463	Oryzias_latipes_hsok
MGP_PahariEiJ_G0030407	-	94	37.725	ENSOMEG00000012441	rnaseh2b	95	40.303	Oryzias_melastigma
MGP_PahariEiJ_G0030407	-	96	60.778	ENSOGAG00000016486	RNASEH2B	99	62.874	Otolemur_garnettii
MGP_PahariEiJ_G0030407	-	95	58.383	ENSOARG00000008701	RNASEH2B	98	62.952	Ovis_aries
MGP_PahariEiJ_G0030407	-	90	65.287	ENSPPAG00000026374	RNASEH2B	91	65.287	Pan_paniscus
MGP_PahariEiJ_G0030407	-	97	64.118	ENSPPRG00000012450	RNASEH2B	99	64.118	Panthera_pardus
MGP_PahariEiJ_G0030407	-	90	63.057	ENSPTIG00000013918	RNASEH2B	99	63.376	Panthera_tigris_altaica
MGP_PahariEiJ_G0030407	-	99	66.087	ENSPTRG00000005886	RNASEH2B	97	66.087	Pan_troglodytes
MGP_PahariEiJ_G0030407	-	100	65.143	ENSPANG00000022424	-	100	65.143	Papio_anubis
MGP_PahariEiJ_G0030407	-	90	39.873	ENSPKIG00000013386	rnaseh2b	89	39.873	Paramormyrops_kingsleyae
MGP_PahariEiJ_G0030407	-	62	40.930	ENSPSIG00000002224	RNASEH2B	81	40.930	Pelodiscus_sinensis
MGP_PahariEiJ_G0030407	-	51	54.891	ENSPMGG00000010299	rnaseh2b	89	54.891	Periophthalmus_magnuspinnatus
MGP_PahariEiJ_G0030407	-	100	70.690	ENSPEMG00000019721	Rnaseh2b	100	71.264	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0030407	-	91	44.969	ENSPCIG00000014535	-	93	44.969	Phascolarctos_cinereus
MGP_PahariEiJ_G0030407	-	90	41.956	ENSPFOG00000016722	rnaseh2b	89	39.432	Poecilia_formosa
MGP_PahariEiJ_G0030407	-	90	39.683	ENSPLAG00000011755	rnaseh2b	89	42.222	Poecilia_latipinna
MGP_PahariEiJ_G0030407	-	90	39.683	ENSPMEG00000002721	rnaseh2b	89	39.683	Poecilia_mexicana
MGP_PahariEiJ_G0030407	-	90	40.000	ENSPREG00000007737	rnaseh2b	89	39.365	Poecilia_reticulata
MGP_PahariEiJ_G0030407	-	100	65.714	ENSPPYG00000005378	RNASEH2B	100	65.714	Pongo_abelii
MGP_PahariEiJ_G0030407	-	100	67.335	ENSPCOG00000026623	RNASEH2B	100	67.049	Propithecus_coquereli
MGP_PahariEiJ_G0030407	-	84	58.419	ENSPVAG00000000508	RNASEH2B	95	60.825	Pteropus_vampyrus
MGP_PahariEiJ_G0030407	-	95	41.018	ENSPNYG00000013552	rnaseh2b	95	41.018	Pundamilia_nyererei
MGP_PahariEiJ_G0030407	-	89	40.385	ENSPNAG00000024825	rnaseh2b	87	40.385	Pygocentrus_nattereri
MGP_PahariEiJ_G0030407	-	100	68.000	ENSRNOG00000009192	Rnaseh2b	100	68.000	Rattus_norvegicus
MGP_PahariEiJ_G0030407	-	100	65.143	ENSRBIG00000028928	-	100	65.143	Rhinopithecus_bieti
MGP_PahariEiJ_G0030407	-	92	57.367	ENSRBIG00000036017	-	92	56.875	Rhinopithecus_bieti
MGP_PahariEiJ_G0030407	-	100	65.429	ENSRROG00000018808	-	100	65.429	Rhinopithecus_roxellana
MGP_PahariEiJ_G0030407	-	76	50.376	ENSRROG00000044915	-	86	50.376	Rhinopithecus_roxellana
MGP_PahariEiJ_G0030407	-	99	64.928	ENSSBOG00000008081	RNASEH2B	100	65.217	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0030407	-	96	50.149	ENSSHAG00000016190	RNASEH2B	95	50.149	Sarcophilus_harrisii
MGP_PahariEiJ_G0030407	-	92	42.547	ENSSFOG00015010190	rnaseh2b	91	42.547	Scleropages_formosus
MGP_PahariEiJ_G0030407	-	95	41.194	ENSSMAG00000001546	rnaseh2b	95	41.194	Scophthalmus_maximus
MGP_PahariEiJ_G0030407	-	93	42.462	ENSSDUG00000007567	rnaseh2b	92	42.462	Seriola_dumerili
MGP_PahariEiJ_G0030407	-	93	41.846	ENSSLDG00000012485	rnaseh2b	92	41.846	Seriola_lalandi_dorsalis
MGP_PahariEiJ_G0030407	-	86	48.837	ENSSPUG00000006745	-	94	48.837	Sphenodon_punctatus
MGP_PahariEiJ_G0030407	-	93	40.615	ENSSPAG00000020926	rnaseh2b	92	40.615	Stegastes_partitus
MGP_PahariEiJ_G0030407	-	65	84.667	ENSSSCG00000024385	RNASEH2B	100	64.527	Sus_scrofa
MGP_PahariEiJ_G0030407	-	90	50.804	ENSTGUG00000012104	RNASEH2B	99	50.804	Taeniopygia_guttata
MGP_PahariEiJ_G0030407	-	94	41.033	ENSTRUG00000015098	rnaseh2b	93	39.091	Takifugu_rubripes
MGP_PahariEiJ_G0030407	-	88	40.190	ENSTNIG00000013861	rnaseh2b	86	39.048	Tetraodon_nigroviridis
MGP_PahariEiJ_G0030407	-	94	53.963	ENSTTRG00000010761	RNASEH2B	94	53.354	Tursiops_truncatus
MGP_PahariEiJ_G0030407	-	94	64.634	ENSUAMG00000022849	RNASEH2B	99	63.836	Ursus_americanus
MGP_PahariEiJ_G0030407	-	94	64.634	ENSUMAG00000018556	RNASEH2B	99	63.836	Ursus_maritimus
MGP_PahariEiJ_G0030407	-	94	62.195	ENSVPAG00000005679	RNASEH2B	100	61.027	Vicugna_pacos
MGP_PahariEiJ_G0030407	-	93	61.538	ENSVVUG00000024015	RNASEH2B	85	62.037	Vulpes_vulpes
MGP_PahariEiJ_G0030407	-	99	45.058	ENSXETG00000020720	rnaseh2b	99	45.058	Xenopus_tropicalis
MGP_PahariEiJ_G0030407	-	90	41.534	ENSXCOG00000018732	rnaseh2b	89	41.534	Xiphophorus_couchianus
MGP_PahariEiJ_G0030407	-	90	39.617	ENSXMAG00000022554	rnaseh2b	89	39.617	Xiphophorus_maculatus