EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0030805 (Gene tree)
Gene ID: 110326506
Gene Symbol: Ddx50
Alias: 4933429B04Rik|8430408E17Rik|GU2|RH-II/Gubeta
Full Name: DExD-box helicase 50
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Minus strand
Length: 32239 bases
Position: chr9:28015525-28047763
Accession: 110326506
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0086305	GUCT	PF08152.12	2.3e-28	1	1
MGP_PahariEiJ_P0086305	ResIII	PF04851.15	4.8e-10	1	1
MGP_PahariEiJ_P0086305	DEAD	PF00270.29	1.7e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0086305	-	2527	XM_021205010	MGP_PahariEiJ_P0086305	734 (aa)	XP_021060669	UPI000A313E15

Gene Model

Click here to download MGP_PahariEiJ_G0030805's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0030805's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PahariEiJ_G0030805	Ddx50	50	32.888	MGP_PahariEiJ_G0018622	-	86	32.888
MGP_PahariEiJ_G0030805	Ddx50	50	33.962	MGP_PahariEiJ_G0020019	Ddx17	55	33.962
MGP_PahariEiJ_G0030805	Ddx50	56	34.038	MGP_PahariEiJ_G0026142	Ddx27	52	33.890
MGP_PahariEiJ_G0030805	Ddx50	51	34.606	MGP_PahariEiJ_G0027765	Ddx18	57	34.447

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0030805	Ddx50	92	95.723	ENSG00000107625	DDX50	92	94.985	Homo_sapiens
MGP_PahariEiJ_G0030805	Ddx50	93	94.583	ENSAMEG00000017992	DDX50	92	93.962	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0030805	Ddx50	92	75.832	ENSANAG00000017785	-	91	75.253	Aotus_nancymaae
MGP_PahariEiJ_G0030805	Ddx50	100	95.387	ENSBTAG00000033413	DDX50	92	94.985	Bos_taurus
MGP_PahariEiJ_G0030805	Ddx50	92	95.723	ENSCJAG00000018844	DDX50	99	97.613	Callithrix_jacchus
MGP_PahariEiJ_G0030805	Ddx50	93	95.022	ENSCAFG00000013776	DDX50	99	94.404	Canis_familiaris
MGP_PahariEiJ_G0030805	Ddx50	93	95.022	ENSCAFG00020025977	DDX50	92	94.404	Canis_lupus_dingo
MGP_PahariEiJ_G0030805	Ddx50	100	95.115	ENSCHIG00000000285	DDX50	92	94.690	Capra_hircus
MGP_PahariEiJ_G0030805	Ddx50	92	95.133	ENSTSYG00000004192	DDX50	99	97.594	Carlito_syrichta
MGP_PahariEiJ_G0030805	Ddx50	91	75.483	ENSCAPG00000007230	-	87	77.658	Cavia_aperea
MGP_PahariEiJ_G0030805	Ddx50	91	95.394	ENSCPOG00000002131	-	92	95.273	Cavia_porcellus
MGP_PahariEiJ_G0030805	Ddx50	82	93.548	ENSCCAG00000030543	DDX50	90	93.548	Cebus_capucinus
MGP_PahariEiJ_G0030805	Ddx50	98	70.458	ENSCATG00000035153	-	89	88.715	Cercocebus_atys
MGP_PahariEiJ_G0030805	Ddx50	92	92.910	ENSCATG00000032463	DDX50	92	92.319	Cercocebus_atys
MGP_PahariEiJ_G0030805	Ddx50	99	64.595	ENSCATG00000039259	-	89	65.492	Cercocebus_atys
MGP_PahariEiJ_G0030805	Ddx50	97	69.296	ENSCLAG00000001938	-	91	69.432	Chinchilla_lanigera
MGP_PahariEiJ_G0030805	Ddx50	100	96.060	ENSCLAG00000012957	-	100	96.060	Chinchilla_lanigera
MGP_PahariEiJ_G0030805	Ddx50	50	86.450	ENSCLAG00000001553	-	79	88.065	Chinchilla_lanigera
MGP_PahariEiJ_G0030805	Ddx50	92	95.723	ENSCSAG00000007703	DDX50	92	95.133	Chlorocebus_sabaeus
MGP_PahariEiJ_G0030805	Ddx50	88	92.758	ENSCHOG00000000233	DDX50	97	92.296	Choloepus_hoffmanni
MGP_PahariEiJ_G0030805	Ddx50	86	70.662	ENSCANG00000018820	-	88	70.957	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0030805	Ddx50	100	82.090	ENSCANG00000036450	-	100	82.090	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0030805	Ddx50	96	66.527	ENSCANG00000028077	-	91	65.982	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0030805	Ddx50	100	97.554	ENSCGRG00001020223	Ddx50	100	97.554	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0030805	Ddx50	100	97.283	ENSCGRG00000015884	Ddx50	100	97.283	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0030805	Ddx50	87	88.253	ENSDNOG00000001675	DDX50	100	88.253	Dasypus_novemcinctus
MGP_PahariEiJ_G0030805	Ddx50	92	95.428	ENSDORG00000007310	Ddx50	92	94.985	Dipodomys_ordii
MGP_PahariEiJ_G0030805	Ddx50	90	97.345	ENSETEG00000014069	DDX50	90	97.345	Echinops_telfairi
MGP_PahariEiJ_G0030805	Ddx50	93	94.721	ENSEASG00005015595	DDX50	92	94.248	Equus_asinus_asinus
MGP_PahariEiJ_G0030805	Ddx50	93	94.721	ENSECAG00000023044	DDX50	92	94.248	Equus_caballus
MGP_PahariEiJ_G0030805	Ddx50	86	95.833	ENSEEUG00000005782	DDX50	79	97.477	Erinaceus_europaeus
MGP_PahariEiJ_G0030805	Ddx50	92	95.287	ENSFCAG00000012678	DDX50	92	94.698	Felis_catus
MGP_PahariEiJ_G0030805	Ddx50	92	88.496	ENSFDAG00000016109	-	91	87.758	Fukomys_damarensis
MGP_PahariEiJ_G0030805	Ddx50	51	81.746	ENSGGOG00000041063	-	82	84.013	Gorilla_gorilla
MGP_PahariEiJ_G0030805	Ddx50	52	70.573	ENSGGOG00000022568	-	91	78.462	Gorilla_gorilla
MGP_PahariEiJ_G0030805	Ddx50	92	95.723	ENSGGOG00000010100	DDX50	99	98.128	Gorilla_gorilla
MGP_PahariEiJ_G0030805	Ddx50	92	93.953	ENSHGLG00000013466	DDX50	92	93.363	Heterocephalus_glaber_female
MGP_PahariEiJ_G0030805	Ddx50	82	87.234	ENSHGLG00100006568	-	92	87.234	Heterocephalus_glaber_male
MGP_PahariEiJ_G0030805	Ddx50	92	93.953	ENSHGLG00100017191	DDX50	92	93.363	Heterocephalus_glaber_male
MGP_PahariEiJ_G0030805	Ddx50	100	94.038	ENSSTOG00000021852	-	100	93.902	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0030805	Ddx50	100	94.022	ENSJJAG00000023928	-	92	93.648	Jaculus_jaculus
MGP_PahariEiJ_G0030805	Ddx50	100	72.703	ENSJJAG00000019626	-	91	73.343	Jaculus_jaculus
MGP_PahariEiJ_G0030805	Ddx50	92	95.723	ENSLAFG00000006186	DDX50	92	95.133	Loxodonta_africana
MGP_PahariEiJ_G0030805	Ddx50	92	95.723	ENSMFAG00000044067	DDX50	92	95.133	Macaca_fascicularis
MGP_PahariEiJ_G0030805	Ddx50	98	70.833	ENSMFAG00000045339	-	89	88.088	Macaca_fascicularis
MGP_PahariEiJ_G0030805	Ddx50	92	95.723	ENSMMUG00000001006	DDX50	100	96.429	Macaca_mulatta
MGP_PahariEiJ_G0030805	Ddx50	80	67.119	ENSMMUG00000045343	-	90	60.677	Macaca_mulatta
MGP_PahariEiJ_G0030805	Ddx50	92	88.791	ENSMNEG00000031664	DDX50	92	88.201	Macaca_nemestrina
MGP_PahariEiJ_G0030805	Ddx50	98	71.271	ENSMNEG00000045530	-	89	89.028	Macaca_nemestrina
MGP_PahariEiJ_G0030805	Ddx50	92	93.805	ENSMLEG00000037313	DDX50	92	93.215	Mandrillus_leucophaeus
MGP_PahariEiJ_G0030805	Ddx50	86	83.645	ENSMLEG00000041988	-	89	87.080	Mandrillus_leucophaeus
MGP_PahariEiJ_G0030805	Ddx50	56	96.117	ENSMAUG00000022192	Ddx50	100	96.117	Mesocricetus_auratus
MGP_PahariEiJ_G0030805	Ddx50	100	88.587	ENSMICG00000017539	DDX50	100	88.587	Microcebus_murinus
MGP_PahariEiJ_G0030805	Ddx50	100	96.748	ENSMOCG00000001676	Ddx50	100	96.748	Microtus_ochrogaster
MGP_PahariEiJ_G0030805	Ddx50	92	79.941	ENSMODG00000010741	DDX50	92	79.971	Monodelphis_domestica
MGP_PahariEiJ_G0030805	Ddx50	100	99.046	MGP_CAROLIEiJ_G0015389	Ddx50	100	99.046	Mus_caroli
MGP_PahariEiJ_G0030805	Ddx50	100	99.591	ENSMUSG00000020076	Ddx50	100	99.591	Mus_musculus
MGP_PahariEiJ_G0030805	Ddx50	100	99.591	MGP_SPRETEiJ_G0016200	Ddx50	100	99.591	Mus_spretus
MGP_PahariEiJ_G0030805	Ddx50	88	94.745	ENSMPUG00000004589	DDX50	99	94.745	Mustela_putorius_furo
MGP_PahariEiJ_G0030805	Ddx50	92	92.920	ENSMLUG00000017590	DDX50	92	92.330	Myotis_lucifugus
MGP_PahariEiJ_G0030805	Ddx50	100	96.739	ENSNGAG00000004283	Ddx50	100	96.739	Nannospalax_galili
MGP_PahariEiJ_G0030805	Ddx50	92	95.723	ENSNLEG00000011631	DDX50	92	94.985	Nomascus_leucogenys
MGP_PahariEiJ_G0030805	Ddx50	88	66.718	ENSNLEG00000035506	-	88	77.882	Nomascus_leucogenys
MGP_PahariEiJ_G0030805	Ddx50	92	93.353	ENSOPRG00000001619	DDX50	92	93.501	Ochotona_princeps
MGP_PahariEiJ_G0030805	Ddx50	92	95.421	ENSODEG00000014597	-	92	94.682	Octodon_degus
MGP_PahariEiJ_G0030805	Ddx50	93	67.145	ENSOANG00000004776	DDX50	82	67.683	Ornithorhynchus_anatinus
MGP_PahariEiJ_G0030805	Ddx50	100	91.168	ENSOCUG00000002879	DDX50	95	94.535	Oryctolagus_cuniculus
MGP_PahariEiJ_G0030805	Ddx50	92	95.133	ENSOGAG00000001844	DDX50	92	94.543	Otolemur_garnettii
MGP_PahariEiJ_G0030805	Ddx50	100	95.115	ENSOARG00000005264	DDX50	92	94.690	Ovis_aries
MGP_PahariEiJ_G0030805	Ddx50	92	95.575	ENSPPAG00000040723	DDX50	92	94.838	Pan_paniscus
MGP_PahariEiJ_G0030805	Ddx50	52	70.526	ENSPPAG00000026788	-	90	78.505	Pan_paniscus
MGP_PahariEiJ_G0030805	Ddx50	92	95.287	ENSPPRG00000015826	DDX50	92	94.698	Panthera_pardus
MGP_PahariEiJ_G0030805	Ddx50	92	95.287	ENSPTIG00000008454	DDX50	92	94.698	Panthera_tigris_altaica
MGP_PahariEiJ_G0030805	Ddx50	52	70.526	ENSPTRG00000044913	-	99	71.316	Pan_troglodytes
MGP_PahariEiJ_G0030805	Ddx50	92	95.575	ENSPTRG00000002562	DDX50	92	94.838	Pan_troglodytes
MGP_PahariEiJ_G0030805	Ddx50	92	87.906	ENSPANG00000022143	-	92	87.316	Papio_anubis
MGP_PahariEiJ_G0030805	Ddx50	92	95.716	ENSPEMG00000020899	-	92	95.716	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0030805	Ddx50	98	75.620	ENSPCIG00000016036	DDX50	94	79.148	Phascolarctos_cinereus
MGP_PahariEiJ_G0030805	Ddx50	91	96.429	ENSPPYG00000002390	DDX50	100	96.429	Pongo_abelii
MGP_PahariEiJ_G0030805	Ddx50	84	80.488	ENSPCAG00000009692	DDX50	100	80.488	Procavia_capensis
MGP_PahariEiJ_G0030805	Ddx50	79	84.526	ENSPCOG00000012574	DDX50	88	84.526	Propithecus_coquereli
MGP_PahariEiJ_G0030805	Ddx50	86	90.083	ENSPVAG00000009519	DDX50	78	90.358	Pteropus_vampyrus
MGP_PahariEiJ_G0030805	Ddx50	100	99.183	ENSRNOG00000000396	Ddx50	100	99.183	Rattus_norvegicus
MGP_PahariEiJ_G0030805	Ddx50	99	64.634	ENSRBIG00000039673	-	90	63.824	Rhinopithecus_bieti
MGP_PahariEiJ_G0030805	Ddx50	87	93.935	ENSRBIG00000042841	-	98	96.048	Rhinopithecus_bieti
MGP_PahariEiJ_G0030805	Ddx50	99	66.257	ENSRBIG00000036573	-	92	65.923	Rhinopithecus_bieti
MGP_PahariEiJ_G0030805	Ddx50	99	63.673	ENSRROG00000022853	-	91	63.111	Rhinopithecus_roxellana
MGP_PahariEiJ_G0030805	Ddx50	52	69.191	ENSRROG00000031940	-	87	74.154	Rhinopithecus_roxellana
MGP_PahariEiJ_G0030805	Ddx50	92	95.575	ENSRROG00000032158	DDX50	100	96.285	Rhinopithecus_roxellana
MGP_PahariEiJ_G0030805	Ddx50	92	84.218	ENSSBOG00000014441	DDX50	99	84.921	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0030805	Ddx50	79	67.613	ENSSHAG00000005334	-	80	67.423	Sarcophilus_harrisii
MGP_PahariEiJ_G0030805	Ddx50	88	80.458	ENSSHAG00000005690	DDX50	91	80.395	Sarcophilus_harrisii
MGP_PahariEiJ_G0030805	Ddx50	100	78.261	ENSSARG00000013553	DDX50	88	84.938	Sorex_araneus
MGP_PahariEiJ_G0030805	Ddx50	100	94.030	ENSSSCG00000010246	DDX50	92	93.510	Sus_scrofa
MGP_PahariEiJ_G0030805	Ddx50	96	73.662	ENSTBEG00000001085	DDX50	92	72.526	Tupaia_belangeri
MGP_PahariEiJ_G0030805	Ddx50	100	88.467	ENSTTRG00000012408	DDX50	99	88.467	Tursiops_truncatus
MGP_PahariEiJ_G0030805	Ddx50	93	94.876	ENSUAMG00000010976	DDX50	99	97.782	Ursus_americanus
MGP_PahariEiJ_G0030805	Ddx50	93	94.876	ENSUMAG00000007726	DDX50	92	94.256	Ursus_maritimus
MGP_PahariEiJ_G0030805	Ddx50	92	94.248	ENSVPAG00000000626	DDX50	92	93.805	Vicugna_pacos
MGP_PahariEiJ_G0030805	Ddx50	82	89.552	ENSVVUG00000020366	DDX50	98	97.861	Vulpes_vulpes