EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0030921 (Gene tree)
Gene ID: 110326512
Gene Symbol: Rrp1
Alias: NNP-1|Nnp1
Full Name: ribosomal RNA processing 1
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Minus strand
Length: 12485 bases
Position: chr9:43075631-43088115
Accession: 110326512
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0086818	Nop52	PF05997.12	1.8e-68	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0086818	-	2023	XM_021205021	MGP_PahariEiJ_P0086818	496 (aa)	XP_021060680	UPI000A30CAA1

Gene Model

Click here to download MGP_PahariEiJ_G0030921's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0030921's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PahariEiJ_G0030921	Rrp1	56	53.982	MGP_PahariEiJ_G0023695	Rrp1b	53	63.492

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0030921	Rrp1	99	59.309	ENSG00000160214	RRP1	96	86.047	Homo_sapiens
MGP_PahariEiJ_G0030921	Rrp1	99	58.350	ENSAMEG00000011448	RRP1	95	79.767	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0030921	Rrp1	81	41.750	ENSACIG00000019121	rrp1	75	56.542	Amphilophus_citrinellus
MGP_PahariEiJ_G0030921	Rrp1	66	54.839	ENSAOCG00000017894	-	75	54.365	Amphiprion_ocellaris
MGP_PahariEiJ_G0030921	Rrp1	65	83.682	ENSANAG00000037815	RRP1	99	56.250	Aotus_nancymaae
MGP_PahariEiJ_G0030921	Rrp1	80	81.659	ENSBTAG00000003981	RRP1	97	77.165	Bos_taurus
MGP_PahariEiJ_G0030921	Rrp1	91	64.560	ENSCJAG00000043205	RRP1	81	78.906	Callithrix_jacchus
MGP_PahariEiJ_G0030921	Rrp1	85	84.100	ENSCAFG00000010646	RRP1	99	58.008	Canis_familiaris
MGP_PahariEiJ_G0030921	Rrp1	85	84.100	ENSCAFG00020018979	RRP1	99	58.008	Canis_lupus_dingo
MGP_PahariEiJ_G0030921	Rrp1	79	82.096	ENSCHIG00000020948	RRP1	92	81.857	Capra_hircus
MGP_PahariEiJ_G0030921	Rrp1	87	48.161	ENSCHIG00000021519	RRP1B	54	54.393	Capra_hircus
MGP_PahariEiJ_G0030921	Rrp1	99	56.055	ENSTSYG00000012831	RRP1	99	57.422	Carlito_syrichta
MGP_PahariEiJ_G0030921	Rrp1	82	57.284	ENSCAPG00000008576	RRP1	80	77.143	Cavia_aperea
MGP_PahariEiJ_G0030921	Rrp1	59	52.016	ENSCPOG00000002396	RRP1B	51	52.016	Cavia_porcellus
MGP_PahariEiJ_G0030921	Rrp1	99	57.540	ENSCPOG00000038986	RRP1	99	58.929	Cavia_porcellus
MGP_PahariEiJ_G0030921	Rrp1	99	62.118	ENSCCAG00000029828	RRP1	99	59.542	Cebus_capucinus
MGP_PahariEiJ_G0030921	Rrp1	95	73.171	ENSCATG00000015632	RRP1	91	81.124	Cercocebus_atys
MGP_PahariEiJ_G0030921	Rrp1	98	60.489	ENSCLAG00000011639	RRP1	99	60.792	Chinchilla_lanigera
MGP_PahariEiJ_G0030921	Rrp1	78	67.268	ENSCSAG00000007936	RRP1	100	65.473	Chlorocebus_sabaeus
MGP_PahariEiJ_G0030921	Rrp1	58	40.385	ENSCING00000003304	-	72	40.385	Ciona_intestinalis
MGP_PahariEiJ_G0030921	Rrp1	90	57.778	ENSCANG00000042611	RRP1	84	56.098	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0030921	Rrp1	68	49.655	ENSCGRG00001023882	-	55	66.667	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0030921	Rrp1	98	76.082	ENSCGRG00001011920	Rrp1	97	75.464	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0030921	Rrp1	98	76.082	ENSCGRG00000008915	Rrp1	97	75.464	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0030921	Rrp1	84	43.839	ENSCSEG00000020711	-	58	57.377	Cynoglossus_semilaevis
MGP_PahariEiJ_G0030921	Rrp1	60	58.333	ENSCVAG00000017568	-	80	58.333	Cyprinodon_variegatus
MGP_PahariEiJ_G0030921	Rrp1	100	53.920	ENSDNOG00000019880	RRP1	99	77.011	Dasypus_novemcinctus
MGP_PahariEiJ_G0030921	Rrp1	90	59.081	ENSDORG00000002104	Rrp1	98	61.707	Dipodomys_ordii
MGP_PahariEiJ_G0030921	Rrp1	57	75.758	ENSETEG00000002963	-	97	65.909	Echinops_telfairi
MGP_PahariEiJ_G0030921	Rrp1	64	80.786	ENSEASG00005001673	RRP1	99	59.519	Equus_asinus_asinus
MGP_PahariEiJ_G0030921	Rrp1	63	80.349	ENSECAG00000015703	RRP1	99	59.319	Equus_caballus
MGP_PahariEiJ_G0030921	Rrp1	78	47.203	ENSELUG00000015885	-	89	51.190	Esox_lucius
MGP_PahariEiJ_G0030921	Rrp1	77	83.333	ENSFCAG00000008434	RRP1	95	83.193	Felis_catus
MGP_PahariEiJ_G0030921	Rrp1	67	57.741	ENSFCAG00000010272	RRP1B	50	57.741	Felis_catus
MGP_PahariEiJ_G0030921	Rrp1	88	81.633	ENSFDAG00000013728	RRP1	99	80.000	Fukomys_damarensis
MGP_PahariEiJ_G0030921	Rrp1	73	60.504	ENSGALG00000035696	RRP1B	53	58.800	Gallus_gallus
MGP_PahariEiJ_G0030921	Rrp1	80	43.216	ENSGACG00000001438	rrp1	52	52.778	Gasterosteus_aculeatus
MGP_PahariEiJ_G0030921	Rrp1	99	59.579	ENSGGOG00000000173	RRP1	100	57.875	Gorilla_gorilla
MGP_PahariEiJ_G0030921	Rrp1	75	81.974	ENSHGLG00000017085	RRP1	93	80.392	Heterocephalus_glaber_female
MGP_PahariEiJ_G0030921	Rrp1	58	46.980	ENSHGLG00000004968	RRP1B	57	54.386	Heterocephalus_glaber_female
MGP_PahariEiJ_G0030921	Rrp1	74	40.476	ENSHGLG00100002232	RRP1B	50	47.253	Heterocephalus_glaber_male
MGP_PahariEiJ_G0030921	Rrp1	63	52.362	ENSIPUG00000000673	-	61	50.775	Ictalurus_punctatus
MGP_PahariEiJ_G0030921	Rrp1	95	60.248	ENSSTOG00000011116	RRP1	93	81.250	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0030921	Rrp1	97	80.645	ENSJJAG00000018886	Rrp1	98	65.992	Jaculus_jaculus
MGP_PahariEiJ_G0030921	Rrp1	94	43.220	ENSLAFG00000000766	RRP1B	90	55.000	Loxodonta_africana
MGP_PahariEiJ_G0030921	Rrp1	99	55.929	ENSLAFG00000022901	RRP1	93	78.814	Loxodonta_africana
MGP_PahariEiJ_G0030921	Rrp1	99	59.768	ENSMFAG00000003202	RRP1	99	57.824	Macaca_fascicularis
MGP_PahariEiJ_G0030921	Rrp1	99	59.961	ENSMMUG00000012304	RRP1	99	58.206	Macaca_mulatta
MGP_PahariEiJ_G0030921	Rrp1	99	59.768	ENSMNEG00000031210	RRP1	99	79.688	Macaca_nemestrina
MGP_PahariEiJ_G0030921	Rrp1	91	56.604	ENSMLEG00000037797	RRP1	99	80.184	Mandrillus_leucophaeus
MGP_PahariEiJ_G0030921	Rrp1	68	60.593	ENSMGAG00000014591	RRP1B	53	58.800	Meleagris_gallopavo
MGP_PahariEiJ_G0030921	Rrp1	83	76.271	ENSMAUG00000017653	Rrp1	98	62.805	Mesocricetus_auratus
MGP_PahariEiJ_G0030921	Rrp1	99	62.020	ENSMICG00000004700	RRP1	98	60.922	Microcebus_murinus
MGP_PahariEiJ_G0030921	Rrp1	99	68.283	ENSMOCG00000015687	Rrp1	99	64.353	Microtus_ochrogaster
MGP_PahariEiJ_G0030921	Rrp1	58	50.209	ENSMOCG00000001117	Rrp1b	54	50.209	Microtus_ochrogaster
MGP_PahariEiJ_G0030921	Rrp1	83	39.568	ENSMMOG00000019175	rrp1	76	62.712	Mola_mola
MGP_PahariEiJ_G0030921	Rrp1	80	43.970	ENSMALG00000010310	rrp1	80	58.333	Monopterus_albus
MGP_PahariEiJ_G0030921	Rrp1	56	52.212	MGP_CAROLIEiJ_G0021376	Rrp1b	53	63.492	Mus_caroli
MGP_PahariEiJ_G0030921	Rrp1	100	92.944	MGP_CAROLIEiJ_G0015508	Rrp1	100	91.935	Mus_caroli
MGP_PahariEiJ_G0030921	Rrp1	100	92.540	ENSMUSG00000061032	Rrp1	100	91.532	Mus_musculus
MGP_PahariEiJ_G0030921	Rrp1	55	53.540	ENSMUSG00000058392	Rrp1b	53	65.079	Mus_musculus
MGP_PahariEiJ_G0030921	Rrp1	100	93.952	MGP_SPRETEiJ_G0016321	Rrp1	100	91.734	Mus_spretus
MGP_PahariEiJ_G0030921	Rrp1	56	54.425	MGP_SPRETEiJ_G0022290	Rrp1b	53	65.079	Mus_spretus
MGP_PahariEiJ_G0030921	Rrp1	91	64.000	ENSMPUG00000009826	RRP1	52	81.961	Mustela_putorius_furo
MGP_PahariEiJ_G0030921	Rrp1	99	60.396	ENSMLUG00000017788	RRP1	51	81.176	Myotis_lucifugus
MGP_PahariEiJ_G0030921	Rrp1	99	58.494	ENSNLEG00000034734	RRP1	99	57.443	Nomascus_leucogenys
MGP_PahariEiJ_G0030921	Rrp1	65	72.650	ENSOPRG00000001319	RRP1	97	70.155	Ochotona_princeps
MGP_PahariEiJ_G0030921	Rrp1	77	54.404	ENSOANG00000006472	-	94	66.805	Ornithorhynchus_anatinus
MGP_PahariEiJ_G0030921	Rrp1	66	57.538	ENSOCUG00000022843	-	83	72.892	Oryctolagus_cuniculus
MGP_PahariEiJ_G0030921	Rrp1	99	59.312	ENSOGAG00000006105	RRP1	98	59.919	Otolemur_garnettii
MGP_PahariEiJ_G0030921	Rrp1	68	51.429	ENSOGAG00000009872	RRP1B	63	58.333	Otolemur_garnettii
MGP_PahariEiJ_G0030921	Rrp1	78	46.947	ENSOARG00000011314	RRP1B	52	53.960	Ovis_aries
MGP_PahariEiJ_G0030921	Rrp1	79	82.533	ENSOARG00000011434	RRP1	92	82.278	Ovis_aries
MGP_PahariEiJ_G0030921	Rrp1	99	59.501	ENSPPAG00000029050	RRP1	99	58.925	Pan_paniscus
MGP_PahariEiJ_G0030921	Rrp1	84	73.050	ENSPPRG00000010656	RRP1	94	79.762	Panthera_pardus
MGP_PahariEiJ_G0030921	Rrp1	76	56.098	ENSPTIG00000019473	RRP1	64	65.482	Panthera_tigris_altaica
MGP_PahariEiJ_G0030921	Rrp1	99	59.693	ENSPTRG00000013962	RRP1	99	58.397	Pan_troglodytes
MGP_PahariEiJ_G0030921	Rrp1	95	73.519	ENSPANG00000015097	RRP1	99	58.733	Papio_anubis
MGP_PahariEiJ_G0030921	Rrp1	60	50.000	ENSPMGG00000007512	-	79	50.000	Periophthalmus_magnuspinnatus
MGP_PahariEiJ_G0030921	Rrp1	90	90.244	ENSPEMG00000018421	Rrp1	99	73.992	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0030921	Rrp1	72	66.393	ENSPCIG00000015523	-	77	66.393	Phascolarctos_cinereus
MGP_PahariEiJ_G0030921	Rrp1	99	58.621	ENSPPYG00000011474	RRP1	99	57.471	Pongo_abelii
MGP_PahariEiJ_G0030921	Rrp1	99	59.200	ENSPCOG00000017706	RRP1	98	59.163	Propithecus_coquereli
MGP_PahariEiJ_G0030921	Rrp1	68	56.429	ENSPVAG00000009925	-	77	56.429	Pteropus_vampyrus
MGP_PahariEiJ_G0030921	Rrp1	85	92.469	ENSRNOG00000001203	Rrp1	100	73.843	Rattus_norvegicus
MGP_PahariEiJ_G0030921	Rrp1	99	58.301	ENSRBIG00000032082	RRP1	99	59.004	Rhinopithecus_bieti
MGP_PahariEiJ_G0030921	Rrp1	99	58.301	ENSRROG00000039799	RRP1	99	58.015	Rhinopithecus_roxellana
MGP_PahariEiJ_G0030921	Rrp1	91	74.296	ENSSBOG00000034689	RRP1	99	58.789	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0030921	Rrp1	56	67.000	ENSSHAG00000010304	-	79	67.000	Sarcophilus_harrisii
MGP_PahariEiJ_G0030921	Rrp1	82	43.210	ENSSMAG00000016847	-	76	53.846	Scophthalmus_maximus
MGP_PahariEiJ_G0030921	Rrp1	72	81.624	ENSSSCG00000037061	RRP1	99	78.431	Sus_scrofa
MGP_PahariEiJ_G0030921	Rrp1	54	60.396	ENSTGUG00000005926	RRP1B	51	60.396	Taeniopygia_guttata
MGP_PahariEiJ_G0030921	Rrp1	80	43.467	ENSTRUG00000017592	rrp1	92	53.441	Takifugu_rubripes
MGP_PahariEiJ_G0030921	Rrp1	56	69.032	ENSTBEG00000001260	-	58	68.276	Tupaia_belangeri
MGP_PahariEiJ_G0030921	Rrp1	64	72.059	ENSTTRG00000011162	RRP1	84	72.059	Tursiops_truncatus
MGP_PahariEiJ_G0030921	Rrp1	50	53.659	ENSTTRG00000000723	RRP1B	54	54.393	Tursiops_truncatus
MGP_PahariEiJ_G0030921	Rrp1	75	48.593	ENSUAMG00000014189	-	97	75.912	Ursus_americanus
MGP_PahariEiJ_G0030921	Rrp1	76	41.161	ENSUMAG00000025510	RRP1B	56	55.941	Ursus_maritimus
MGP_PahariEiJ_G0030921	Rrp1	91	54.468	ENSUMAG00000025507	RRP1	98	78.462	Ursus_maritimus