EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0030951 (Gene tree)
Gene ID: 110326183
Gene Symbol: Polrmt
Alias: 1110018N15Rik
Full Name: RNA polymerase mitochondrial
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Minus strand
Length: 10464 bases
Position: chr9:44269557-44280020
Accession: 110326183
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0086886	RNA_pol	PF00940.19	4.4e-166	1	1
MGP_PahariEiJ_P0086885	RNA_pol	PF00940.19	5.3e-166	1	1
MGP_PahariEiJ_P0086882	RNA_pol	PF00940.19	3e-133	1	2
MGP_PahariEiJ_P0086882	RNA_pol	PF00940.19	3e-133	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0086890	-	653	-	-	- (aa)	-	-
MGP_PahariEiJ_T0086891	-	1232	-	-	- (aa)	-	-
MGP_PahariEiJ_T0086892	-	602	-	-	- (aa)	-	-
MGP_PahariEiJ_T0086893	-	410	-	-	- (aa)	-	-
MGP_PahariEiJ_T0086889	-	3752	-	MGP_PahariEiJ_P0086889	904 (aa)	-	-
MGP_PahariEiJ_T0086888	-	703	-	-	- (aa)	-	-
MGP_PahariEiJ_T0086887	-	394	-	-	- (aa)	-	-
MGP_PahariEiJ_T0086886	-	3538	XM_021204357	MGP_PahariEiJ_P0086886	1134 (aa)	XP_021060016	UPI000A3111DA
MGP_PahariEiJ_T0086885	-	3758	XM_021204356	MGP_PahariEiJ_P0086885	1208 (aa)	XP_021060015	UPI000A3135D0
MGP_PahariEiJ_T0086884	-	374	-	-	- (aa)	-	-
MGP_PahariEiJ_T0086883	-	3938	-	-	- (aa)	-	-
MGP_PahariEiJ_T0086882	-	1287	-	MGP_PahariEiJ_P0086882	392 (aa)	-	-
MGP_PahariEiJ_T0086881	-	4295	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_PahariEiJ_G0030951's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0030951's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0030951	Polrmt	100	78.905	ENSG00000099821	POLRMT	94	78.905	Homo_sapiens
MGP_PahariEiJ_G0030951	Polrmt	100	61.894	ENSAPOG00000003942	polrmt	92	63.333	Acanthochromis_polyacanthus
MGP_PahariEiJ_G0030951	Polrmt	100	78.822	ENSAMEG00000002745	POLRMT	94	78.822	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0030951	Polrmt	100	61.201	ENSACIG00000016078	polrmt	95	62.857	Amphilophus_citrinellus
MGP_PahariEiJ_G0030951	Polrmt	100	62.356	ENSAOCG00000020208	polrmt	92	63.371	Amphiprion_ocellaris
MGP_PahariEiJ_G0030951	Polrmt	100	62.587	ENSAPEG00000007949	polrmt	90	62.399	Amphiprion_percula
MGP_PahariEiJ_G0030951	Polrmt	100	61.894	ENSATEG00000024025	polrmt	92	63.285	Anabas_testudineus
MGP_PahariEiJ_G0030951	Polrmt	100	61.609	ENSAPLG00000003051	POLRMT	99	65.495	Anas_platyrhynchos
MGP_PahariEiJ_G0030951	Polrmt	99	75.684	ENSANAG00000032916	POLRMT	94	75.684	Aotus_nancymaae
MGP_PahariEiJ_G0030951	Polrmt	100	61.894	ENSACLG00000003766	polrmt	76	63.016	Astatotilapia_calliptera
MGP_PahariEiJ_G0030951	Polrmt	99	61.587	ENSAMXG00000018258	polrmt	91	61.587	Astyanax_mexicanus
MGP_PahariEiJ_G0030951	Polrmt	100	78.537	ENSBTAG00000015051	POLRMT	96	78.537	Bos_taurus
MGP_PahariEiJ_G0030951	Polrmt	100	40.590	WBGene00013680	rpom-1	53	41.600	Caenorhabditis_elegans
MGP_PahariEiJ_G0030951	Polrmt	99	74.396	ENSCJAG00000012913	POLRMT	94	74.396	Callithrix_jacchus
MGP_PahariEiJ_G0030951	Polrmt	100	79.454	ENSCAFG00000019711	POLRMT	95	79.454	Canis_familiaris
MGP_PahariEiJ_G0030951	Polrmt	100	79.454	ENSCAFG00020016843	POLRMT	95	79.454	Canis_lupus_dingo
MGP_PahariEiJ_G0030951	Polrmt	100	78.778	ENSCHIG00000013267	POLRMT	94	78.778	Capra_hircus
MGP_PahariEiJ_G0030951	Polrmt	94	71.341	ENSCAPG00000016900	POLRMT	100	71.605	Cavia_aperea
MGP_PahariEiJ_G0030951	Polrmt	100	73.065	ENSCPOG00000023061	POLRMT	100	60.463	Cavia_porcellus
MGP_PahariEiJ_G0030951	Polrmt	100	75.040	ENSCCAG00000025014	POLRMT	94	75.040	Cebus_capucinus
MGP_PahariEiJ_G0030951	Polrmt	100	78.583	ENSCATG00000040393	POLRMT	94	78.583	Cercocebus_atys
MGP_PahariEiJ_G0030951	Polrmt	100	70.439	ENSCLAG00000007473	POLRMT	75	76.774	Chinchilla_lanigera
MGP_PahariEiJ_G0030951	Polrmt	100	78.422	ENSCSAG00000012942	POLRMT	94	78.422	Chlorocebus_sabaeus
MGP_PahariEiJ_G0030951	Polrmt	100	62.759	ENSCPBG00000009869	POLRMT	96	64.952	Chrysemys_picta_bellii
MGP_PahariEiJ_G0030951	Polrmt	62	49.194	ENSCING00000024450	-	100	50.000	Ciona_intestinalis
MGP_PahariEiJ_G0030951	Polrmt	100	46.882	ENSCSAVG00000000440	-	99	43.888	Ciona_savignyi
MGP_PahariEiJ_G0030951	Polrmt	100	77.617	ENSCANG00000038011	POLRMT	94	77.617	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0030951	Polrmt	100	82.042	ENSCGRG00001021311	Polrmt	100	82.042	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0030951	Polrmt	100	81.833	ENSCGRG00000011134	Polrmt	100	81.833	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0030951	Polrmt	100	60.508	ENSCSEG00000002734	polrmt	76	62.641	Cynoglossus_semilaevis
MGP_PahariEiJ_G0030951	Polrmt	100	60.970	ENSCVAG00000005949	polrmt	92	63.870	Cyprinodon_variegatus
MGP_PahariEiJ_G0030951	Polrmt	100	61.894	ENSDARG00000101220	polrmt	91	63.942	Danio_rerio
MGP_PahariEiJ_G0030951	Polrmt	99	74.436	ENSDORG00000014125	Polrmt	99	78.409	Dipodomys_ordii
MGP_PahariEiJ_G0030951	Polrmt	100	53.089	FBgn0261938	mtRNApol	70	55.414	Drosophila_melanogaster
MGP_PahariEiJ_G0030951	Polrmt	100	70.257	ENSETEG00000003476	POLRMT	94	70.257	Echinops_telfairi
MGP_PahariEiJ_G0030951	Polrmt	100	60.046	ENSEBUG00000013453	-	91	59.649	Eptatretus_burgeri
MGP_PahariEiJ_G0030951	Polrmt	100	80.738	ENSEASG00005021493	POLRMT	94	80.738	Equus_asinus_asinus
MGP_PahariEiJ_G0030951	Polrmt	100	80.738	ENSECAG00000032711	POLRMT	94	80.738	Equus_caballus
MGP_PahariEiJ_G0030951	Polrmt	100	61.048	ENSELUG00000019319	polrmt	76	55.556	Esox_lucius
MGP_PahariEiJ_G0030951	Polrmt	100	80.738	ENSFCAG00000018808	POLRMT	94	80.738	Felis_catus
MGP_PahariEiJ_G0030951	Polrmt	80	67.904	ENSFALG00000013910	POLRMT	93	67.904	Ficedula_albicollis
MGP_PahariEiJ_G0030951	Polrmt	100	75.645	ENSFDAG00000020312	POLRMT	100	57.583	Fukomys_damarensis
MGP_PahariEiJ_G0030951	Polrmt	99	61.343	ENSFHEG00000021239	polrmt	95	57.082	Fundulus_heteroclitus
MGP_PahariEiJ_G0030951	Polrmt	100	55.530	ENSGMOG00000011829	polrmt	97	60.320	Gadus_morhua
MGP_PahariEiJ_G0030951	Polrmt	100	61.663	ENSGALG00000001377	POLRMT	93	65.169	Gallus_gallus
MGP_PahariEiJ_G0030951	Polrmt	100	61.894	ENSGAFG00000003953	polrmt	95	57.576	Gambusia_affinis
MGP_PahariEiJ_G0030951	Polrmt	100	57.834	ENSGACG00000012957	polrmt	91	60.772	Gasterosteus_aculeatus
MGP_PahariEiJ_G0030951	Polrmt	100	61.327	ENSGAGG00000005522	POLRMT	96	65.287	Gopherus_agassizii
MGP_PahariEiJ_G0030951	Polrmt	81	82.609	ENSGGOG00000023264	-	95	82.609	Gorilla_gorilla
MGP_PahariEiJ_G0030951	Polrmt	100	61.894	ENSHBUG00000010005	polrmt	74	63.175	Haplochromis_burtoni
MGP_PahariEiJ_G0030951	Polrmt	100	71.659	ENSHGLG00000019286	POLRMT	84	77.295	Heterocephalus_glaber_female
MGP_PahariEiJ_G0030951	Polrmt	100	75.845	ENSHGLG00100005762	POLRMT	97	75.845	Heterocephalus_glaber_male
MGP_PahariEiJ_G0030951	Polrmt	100	60.508	ENSHCOG00000001565	polrmt	94	65.358	Hippocampus_comes
MGP_PahariEiJ_G0030951	Polrmt	100	61.432	ENSIPUG00000000789	polrmt	95	48.412	Ictalurus_punctatus
MGP_PahariEiJ_G0030951	Polrmt	98	82.915	ENSSTOG00000003431	POLRMT	100	83.165	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0030951	Polrmt	99	77.097	ENSJJAG00000012916	Polrmt	99	76.886	Jaculus_jaculus
MGP_PahariEiJ_G0030951	Polrmt	100	60.000	ENSKMAG00000004426	polrmt	92	60.918	Kryptolebias_marmoratus
MGP_PahariEiJ_G0030951	Polrmt	100	61.663	ENSLBEG00000016529	polrmt	77	63.016	Labrus_bergylta
MGP_PahariEiJ_G0030951	Polrmt	97	63.434	ENSLACG00000011518	POLRMT	95	63.434	Latimeria_chalumnae
MGP_PahariEiJ_G0030951	Polrmt	97	41.574	ENSLOCG00000005222	polrmt	94	41.821	Lepisosteus_oculatus
MGP_PahariEiJ_G0030951	Polrmt	99	78.045	ENSLAFG00000001860	POLRMT	94	78.045	Loxodonta_africana
MGP_PahariEiJ_G0030951	Polrmt	100	78.905	ENSMFAG00000031466	POLRMT	94	78.905	Macaca_fascicularis
MGP_PahariEiJ_G0030951	Polrmt	100	78.583	ENSMNEG00000039129	POLRMT	94	78.583	Macaca_nemestrina
MGP_PahariEiJ_G0030951	Polrmt	87	78.711	ENSMLEG00000037404	POLRMT	99	78.711	Mandrillus_leucophaeus
MGP_PahariEiJ_G0030951	Polrmt	100	62.642	ENSMAMG00000019284	polrmt	75	63.050	Mastacembelus_armatus
MGP_PahariEiJ_G0030951	Polrmt	100	61.894	ENSMZEG00005009932	polrmt	76	63.016	Maylandia_zebra
MGP_PahariEiJ_G0030951	Polrmt	100	61.432	ENSMGAG00000003243	POLRMT	96	64.848	Meleagris_gallopavo
MGP_PahariEiJ_G0030951	Polrmt	100	88.122	ENSMAUG00000019392	Polrmt	94	88.122	Mesocricetus_auratus
MGP_PahariEiJ_G0030951	Polrmt	100	80.161	ENSMICG00000016701	POLRMT	94	80.161	Microcebus_murinus
MGP_PahariEiJ_G0030951	Polrmt	100	85.783	ENSMOCG00000008868	Polrmt	100	80.231	Microtus_ochrogaster
MGP_PahariEiJ_G0030951	Polrmt	85	53.887	ENSMMOG00000000705	polrmt	90	57.895	Mola_mola
MGP_PahariEiJ_G0030951	Polrmt	99	66.292	ENSMODG00000006478	POLRMT	93	66.292	Monodelphis_domestica
MGP_PahariEiJ_G0030951	Polrmt	100	61.432	ENSMALG00000021224	polrmt	92	63.607	Monopterus_albus
MGP_PahariEiJ_G0030951	Polrmt	100	96.629	MGP_CAROLIEiJ_G0015538	Polrmt	100	96.429	Mus_caroli
MGP_PahariEiJ_G0030951	Polrmt	100	96.148	ENSMUSG00000020329	Polrmt	99	95.663	Mus_musculus
MGP_PahariEiJ_G0030951	Polrmt	100	96.629	MGP_SPRETEiJ_G0016356	Polrmt	100	96.629	Mus_spretus
MGP_PahariEiJ_G0030951	Polrmt	100	79.194	ENSMPUG00000009910	POLRMT	94	78.973	Mustela_putorius_furo
MGP_PahariEiJ_G0030951	Polrmt	100	80.161	ENSMLUG00000009223	POLRMT	94	80.161	Myotis_lucifugus
MGP_PahariEiJ_G0030951	Polrmt	100	88.604	ENSNGAG00000005498	Polrmt	100	88.871	Nannospalax_galili
MGP_PahariEiJ_G0030951	Polrmt	97	61.995	ENSNBRG00000023530	polrmt	73	65.474	Neolamprologus_brichardi
MGP_PahariEiJ_G0030951	Polrmt	100	70.276	ENSNLEG00000000718	POLRMT	100	64.677	Nomascus_leucogenys
MGP_PahariEiJ_G0030951	Polrmt	84	74.054	ENSOPRG00000013579	POLRMT	68	77.680	Ochotona_princeps
MGP_PahariEiJ_G0030951	Polrmt	100	61.663	ENSONIG00000002405	polrmt	98	62.857	Oreochromis_niloticus
MGP_PahariEiJ_G0030951	Polrmt	100	62.212	ENSORLG00000004329	polrmt	90	62.916	Oryzias_latipes
MGP_PahariEiJ_G0030951	Polrmt	100	61.982	ENSORLG00020003896	polrmt	92	64.796	Oryzias_latipes_hni
MGP_PahariEiJ_G0030951	Polrmt	100	61.982	ENSORLG00015022238	polrmt	89	62.916	Oryzias_latipes_hsok
MGP_PahariEiJ_G0030951	Polrmt	100	63.279	ENSOMEG00000008292	polrmt	92	64.286	Oryzias_melastigma
MGP_PahariEiJ_G0030951	Polrmt	100	81.862	ENSOGAG00000007912	POLRMT	94	81.862	Otolemur_garnettii
MGP_PahariEiJ_G0030951	Polrmt	100	69.615	ENSOARG00000008898	POLRMT	92	77.226	Ovis_aries
MGP_PahariEiJ_G0030951	Polrmt	99	75.523	ENSPPAG00000043321	-	93	75.523	Pan_paniscus
MGP_PahariEiJ_G0030951	Polrmt	100	76.490	ENSPPAG00000030853	POLRMT	94	76.490	Pan_paniscus
MGP_PahariEiJ_G0030951	Polrmt	100	72.311	ENSPPRG00000001547	POLRMT	93	78.970	Panthera_pardus
MGP_PahariEiJ_G0030951	Polrmt	99	75.845	ENSPTRG00000039638	-	94	75.845	Pan_troglodytes
MGP_PahariEiJ_G0030951	Polrmt	100	77.295	ENSPTRG00000010157	POLRMT	90	77.295	Pan_troglodytes
MGP_PahariEiJ_G0030951	Polrmt	100	78.583	ENSPANG00000006649	POLRMT	94	78.583	Papio_anubis
MGP_PahariEiJ_G0030951	Polrmt	100	60.321	ENSPKIG00000024580	polrmt	92	62.085	Paramormyrops_kingsleyae
MGP_PahariEiJ_G0030951	Polrmt	100	60.277	ENSPMGG00000014627	polrmt	83	62.063	Periophthalmus_magnuspinnatus
MGP_PahariEiJ_G0030951	Polrmt	100	89.406	ENSPEMG00000011671	Polrmt	94	89.677	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0030951	Polrmt	69	65.319	ENSPMAG00000005070	-	100	65.319	Petromyzon_marinus
MGP_PahariEiJ_G0030951	Polrmt	100	65.862	ENSPCIG00000006103	POLRMT	96	65.862	Phascolarctos_cinereus
MGP_PahariEiJ_G0030951	Polrmt	100	61.201	ENSPFOG00000003911	polrmt	100	57.606	Poecilia_formosa
MGP_PahariEiJ_G0030951	Polrmt	83	59.279	ENSPLAG00000005743	polrmt	93	59.279	Poecilia_latipinna
MGP_PahariEiJ_G0030951	Polrmt	100	60.970	ENSPMEG00000008947	polrmt	98	57.992	Poecilia_mexicana
MGP_PahariEiJ_G0030951	Polrmt	92	39.558	ENSPMEG00000011484	polrmt	95	52.041	Poecilia_mexicana
MGP_PahariEiJ_G0030951	Polrmt	100	61.201	ENSPREG00000007650	polrmt	92	63.175	Poecilia_reticulata
MGP_PahariEiJ_G0030951	Polrmt	93	78.689	ENSPPYG00000009282	POLRMT	100	74.583	Pongo_abelii
MGP_PahariEiJ_G0030951	Polrmt	100	64.469	ENSPCAG00000010816	POLRMT	100	59.076	Procavia_capensis
MGP_PahariEiJ_G0030951	Polrmt	100	74.839	ENSPCOG00000014539	POLRMT	94	74.839	Propithecus_coquereli
MGP_PahariEiJ_G0030951	Polrmt	100	77.617	ENSPVAG00000008403	POLRMT	94	77.404	Pteropus_vampyrus
MGP_PahariEiJ_G0030951	Polrmt	100	61.894	ENSPNYG00000020790	polrmt	74	63.016	Pundamilia_nyererei
MGP_PahariEiJ_G0030951	Polrmt	100	61.609	ENSPNAG00000019790	polrmt	90	65.529	Pygocentrus_nattereri
MGP_PahariEiJ_G0030951	Polrmt	100	88.245	ENSRNOG00000024879	Polrmt	100	88.245	Rattus_norvegicus
MGP_PahariEiJ_G0030951	Polrmt	100	77.404	ENSRBIG00000006728	POLRMT	94	77.404	Rhinopithecus_bieti
MGP_PahariEiJ_G0030951	Polrmt	100	78.100	ENSRROG00000040809	POLRMT	94	78.100	Rhinopithecus_roxellana
MGP_PahariEiJ_G0030951	Polrmt	91	41.966	YFL036W	-	52	38.533	Saccharomyces_cerevisiae
MGP_PahariEiJ_G0030951	Polrmt	99	74.235	ENSSBOG00000025388	POLRMT	94	74.235	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0030951	Polrmt	100	59.080	ENSSHAG00000009387	-	100	58.722	Sarcophilus_harrisii
MGP_PahariEiJ_G0030951	Polrmt	100	61.432	ENSSFOG00015005074	polrmt	96	63.391	Scleropages_formosus
MGP_PahariEiJ_G0030951	Polrmt	100	61.982	ENSSMAG00000011851	polrmt	92	63.233	Scophthalmus_maximus
MGP_PahariEiJ_G0030951	Polrmt	100	61.432	ENSSDUG00000004410	polrmt	93	61.746	Seriola_dumerili
MGP_PahariEiJ_G0030951	Polrmt	100	61.432	ENSSLDG00000010643	polrmt	93	61.746	Seriola_lalandi_dorsalis
MGP_PahariEiJ_G0030951	Polrmt	70	58.123	ENSSPUG00000009181	-	100	58.537	Sphenodon_punctatus
MGP_PahariEiJ_G0030951	Polrmt	100	62.356	ENSSPAG00000018740	polrmt	94	64.263	Stegastes_partitus
MGP_PahariEiJ_G0030951	Polrmt	100	76.997	ENSSSCG00000035693	POLRMT	94	76.997	Sus_scrofa
MGP_PahariEiJ_G0030951	Polrmt	100	62.442	ENSTGUG00000000621	POLRMT	100	56.533	Taeniopygia_guttata
MGP_PahariEiJ_G0030951	Polrmt	100	59.815	ENSTRUG00000018040	polrmt	91	64.200	Takifugu_rubripes
MGP_PahariEiJ_G0030951	Polrmt	100	61.785	ENSTNIG00000010642	polrmt	93	63.099	Tetraodon_nigroviridis
MGP_PahariEiJ_G0030951	Polrmt	67	67.330	ENSTBEG00000001819	-	89	81.341	Tupaia_belangeri
MGP_PahariEiJ_G0030951	Polrmt	75	72.700	ENSTTRG00000011329	POLRMT	65	78.353	Tursiops_truncatus
MGP_PahariEiJ_G0030951	Polrmt	100	79.775	ENSUAMG00000019616	POLRMT	93	81.884	Ursus_americanus
MGP_PahariEiJ_G0030951	Polrmt	97	73.871	ENSVVUG00000022627	POLRMT	93	73.871	Vulpes_vulpes
MGP_PahariEiJ_G0030951	Polrmt	100	62.673	ENSXETG00000006545	polrmt	91	65.176	Xenopus_tropicalis
MGP_PahariEiJ_G0030951	Polrmt	100	62.125	ENSXMAG00000012464	polrmt	92	63.333	Xiphophorus_maculatus