EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0030964 (Gene tree)
Gene ID: 110326475
Gene Symbol: R3hdm4
Alias: C030046I01Rik
Full Name: R3H domain containing 4
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Minus strand
Length: 6894 bases
Position: chr9:44442204-44449097
Accession: 110326475
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0086948	R3H	PF01424.22	1.6e-06	1	1
MGP_PahariEiJ_P0086949	R3H	PF01424.22	1.6e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0086948	-	1777	-	MGP_PahariEiJ_P0086948	263 (aa)	XP_021060601	UPI000A30E49D
MGP_PahariEiJ_T0086949	-	1668	-	MGP_PahariEiJ_P0086949	263 (aa)	XP_021060601	UPI000A30E49D

Gene Model

Click here to download MGP_PahariEiJ_G0030964's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0030964's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0030964	R3hdm4	100	85.768	ENSG00000198858	R3HDM4	99	84.644	Homo_sapiens
MGP_PahariEiJ_G0030964	R3hdm4	92	85.950	ENSAMEG00000003001	R3HDM4	99	84.711	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0030964	R3hdm4	89	55.319	ENSACIG00000004672	r3hdm4	91	54.468	Amphilophus_citrinellus
MGP_PahariEiJ_G0030964	R3hdm4	88	53.219	ENSATEG00000015913	r3hdm4	91	52.790	Anabas_testudineus
MGP_PahariEiJ_G0030964	R3hdm4	92	88.430	ENSANAG00000029748	R3HDM4	99	87.603	Aotus_nancymaae
MGP_PahariEiJ_G0030964	R3hdm4	95	86.000	ENSBTAG00000046406	R3HDM4	99	80.812	Bos_taurus
MGP_PahariEiJ_G0030964	R3hdm4	94	87.903	ENSCJAG00000020114	R3HDM4	93	87.097	Callithrix_jacchus
MGP_PahariEiJ_G0030964	R3hdm4	100	82.288	ENSCAFG00000019665	R3HDM4	99	81.181	Canis_familiaris
MGP_PahariEiJ_G0030964	R3hdm4	100	81.919	ENSCAFG00020016880	R3HDM4	99	80.812	Canis_lupus_dingo
MGP_PahariEiJ_G0030964	R3hdm4	100	82.657	ENSCHIG00000020110	R3HDM4	97	83.984	Capra_hircus
MGP_PahariEiJ_G0030964	R3hdm4	95	84.921	ENSCCAG00000019955	R3HDM4	91	84.462	Cebus_capucinus
MGP_PahariEiJ_G0030964	R3hdm4	100	84.387	ENSCATG00000037269	R3HDM4	99	84.015	Cercocebus_atys
MGP_PahariEiJ_G0030964	R3hdm4	92	89.669	ENSCLAG00000007094	R3HDM4	99	88.430	Chinchilla_lanigera
MGP_PahariEiJ_G0030964	R3hdm4	100	85.768	ENSCSAG00000012574	R3HDM4	99	84.644	Chlorocebus_sabaeus
MGP_PahariEiJ_G0030964	R3hdm4	99	65.779	ENSCPBG00000009805	R3HDM4	99	65.399	Chrysemys_picta_bellii
MGP_PahariEiJ_G0030964	R3hdm4	96	85.039	ENSCANG00000040439	R3HDM4	89	83.858	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0030964	R3hdm4	100	91.698	ENSCGRG00001021650	R3hdm4	100	92.453	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0030964	R3hdm4	100	91.698	ENSCGRG00000013169	R3hdm4	100	92.453	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0030964	R3hdm4	89	52.119	ENSCSEG00000018211	r3hdm4	91	50.855	Cynoglossus_semilaevis
MGP_PahariEiJ_G0030964	R3hdm4	99	52.091	ENSCVAG00000017127	r3hdm4	99	52.091	Cyprinodon_variegatus
MGP_PahariEiJ_G0030964	R3hdm4	97	86.100	ENSDORG00000006605	R3hdm4	99	89.754	Dipodomys_ordii
MGP_PahariEiJ_G0030964	R3hdm4	95	86.957	ENSEASG00005021556	R3HDM4	88	88.017	Equus_asinus_asinus
MGP_PahariEiJ_G0030964	R3hdm4	92	88.934	ENSECAG00000000003	R3HDM4	99	84.074	Equus_caballus
MGP_PahariEiJ_G0030964	R3hdm4	100	83.271	ENSFCAG00000042437	R3HDM4	99	82.156	Felis_catus
MGP_PahariEiJ_G0030964	R3hdm4	91	68.465	ENSFALG00000013938	R3HDM4	99	68.050	Ficedula_albicollis
MGP_PahariEiJ_G0030964	R3hdm4	92	88.066	ENSFDAG00000017040	R3HDM4	99	86.831	Fukomys_damarensis
MGP_PahariEiJ_G0030964	R3hdm4	99	52.091	ENSFHEG00000017636	r3hdm4	99	51.331	Fundulus_heteroclitus
MGP_PahariEiJ_G0030964	R3hdm4	89	52.361	ENSGMOG00000001231	r3hdm4	95	52.564	Gadus_morhua
MGP_PahariEiJ_G0030964	R3hdm4	90	65.000	ENSGALG00000001998	R3HDM4	90	64.583	Gallus_gallus
MGP_PahariEiJ_G0030964	R3hdm4	99	53.612	ENSGAFG00000004173	r3hdm4	99	53.232	Gambusia_affinis
MGP_PahariEiJ_G0030964	R3hdm4	94	66.403	ENSGAGG00000019698	R3HDM4	99	63.806	Gopherus_agassizii
MGP_PahariEiJ_G0030964	R3hdm4	92	88.843	ENSGGOG00000008040	R3HDM4	99	87.603	Gorilla_gorilla
MGP_PahariEiJ_G0030964	R3hdm4	89	54.468	ENSHBUG00000014810	r3hdm4	91	54.894	Haplochromis_burtoni
MGP_PahariEiJ_G0030964	R3hdm4	100	83.955	ENSHGLG00000016194	R3HDM4	99	82.836	Heterocephalus_glaber_female
MGP_PahariEiJ_G0030964	R3hdm4	89	54.701	ENSHCOG00000008422	r3hdm4	91	54.468	Hippocampus_comes
MGP_PahariEiJ_G0030964	R3hdm4	89	53.390	ENSIPUG00000006716	r3hdm4	91	52.340	Ictalurus_punctatus
MGP_PahariEiJ_G0030964	R3hdm4	92	86.364	ENSSTOG00000023015	R3HDM4	99	87.190	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0030964	R3hdm4	100	86.194	ENSJJAG00000012475	R3hdm4	100	84.701	Jaculus_jaculus
MGP_PahariEiJ_G0030964	R3hdm4	92	54.959	ENSKMAG00000005853	r3hdm4	91	54.132	Kryptolebias_marmoratus
MGP_PahariEiJ_G0030964	R3hdm4	89	54.077	ENSLBEG00000000730	r3hdm4	91	53.846	Labrus_bergylta
MGP_PahariEiJ_G0030964	R3hdm4	95	58.893	ENSLACG00000016445	R3HDM4	93	60.581	Latimeria_chalumnae
MGP_PahariEiJ_G0030964	R3hdm4	89	57.203	ENSLOCG00000002423	r3hdm4	99	53.962	Lepisosteus_oculatus
MGP_PahariEiJ_G0030964	R3hdm4	98	83.398	ENSLAFG00000017796	R3HDM4	100	82.239	Loxodonta_africana
MGP_PahariEiJ_G0030964	R3hdm4	100	85.768	ENSMFAG00000044131	R3HDM4	99	84.644	Macaca_fascicularis
MGP_PahariEiJ_G0030964	R3hdm4	100	79.699	ENSMMUG00000009682	R3HDM4	99	78.571	Macaca_mulatta
MGP_PahariEiJ_G0030964	R3hdm4	92	88.843	ENSMNEG00000044115	R3HDM4	98	87.603	Macaca_nemestrina
MGP_PahariEiJ_G0030964	R3hdm4	96	83.984	ENSMLEG00000035693	R3HDM4	94	83.594	Mandrillus_leucophaeus
MGP_PahariEiJ_G0030964	R3hdm4	77	56.158	ENSMAMG00000005652	r3hdm4	82	55.665	Mastacembelus_armatus
MGP_PahariEiJ_G0030964	R3hdm4	100	90.189	ENSMAUG00000010611	R3hdm4	100	90.943	Mesocricetus_auratus
MGP_PahariEiJ_G0030964	R3hdm4	100	84.758	ENSMICG00000010124	R3HDM4	99	83.643	Microcebus_murinus
MGP_PahariEiJ_G0030964	R3hdm4	100	90.494	ENSMOCG00000002646	R3hdm4	100	90.494	Microtus_ochrogaster
MGP_PahariEiJ_G0030964	R3hdm4	89	54.468	ENSMMOG00000008253	r3hdm4	91	53.617	Mola_mola
MGP_PahariEiJ_G0030964	R3hdm4	87	64.935	ENSMODG00000005698	R3HDM4	99	64.502	Monodelphis_domestica
MGP_PahariEiJ_G0030964	R3hdm4	89	53.191	ENSMALG00000018856	r3hdm4	90	53.191	Monopterus_albus
MGP_PahariEiJ_G0030964	R3hdm4	100	98.099	MGP_CAROLIEiJ_G0015551	R3hdm4	100	98.099	Mus_caroli
MGP_PahariEiJ_G0030964	R3hdm4	100	97.719	ENSMUSG00000035781	R3hdm4	100	97.719	Mus_musculus
MGP_PahariEiJ_G0030964	R3hdm4	100	97.719	MGP_SPRETEiJ_G0016369	-	84	97.719	Mus_spretus
MGP_PahariEiJ_G0030964	R3hdm4	97	82.558	ENSMPUG00000009394	R3HDM4	96	81.395	Mustela_putorius_furo
MGP_PahariEiJ_G0030964	R3hdm4	89	54.043	ENSNBRG00000004438	r3hdm4	91	54.468	Neolamprologus_brichardi
MGP_PahariEiJ_G0030964	R3hdm4	86	87.446	ENSNLEG00000001022	R3HDM4	100	84.416	Nomascus_leucogenys
MGP_PahariEiJ_G0030964	R3hdm4	89	63.983	ENSMEUG00000011020	R3HDM4	98	62.712	Notamacropus_eugenii
MGP_PahariEiJ_G0030964	R3hdm4	100	84.701	ENSODEG00000011745	R3HDM4	99	83.582	Octodon_degus
MGP_PahariEiJ_G0030964	R3hdm4	89	54.468	ENSONIG00000012675	r3hdm4	84	54.894	Oreochromis_niloticus
MGP_PahariEiJ_G0030964	R3hdm4	89	55.319	ENSOMEG00000003005	r3hdm4	91	54.545	Oryzias_melastigma
MGP_PahariEiJ_G0030964	R3hdm4	99	83.270	ENSOGAG00000025656	R3HDM4	99	83.270	Otolemur_garnettii
MGP_PahariEiJ_G0030964	R3hdm4	92	87.603	ENSOARG00000009945	R3HDM4	99	86.364	Ovis_aries
MGP_PahariEiJ_G0030964	R3hdm4	92	89.256	ENSPPAG00000042371	R3HDM4	99	88.017	Pan_paniscus
MGP_PahariEiJ_G0030964	R3hdm4	100	85.768	ENSPANG00000015203	R3HDM4	99	84.644	Papio_anubis
MGP_PahariEiJ_G0030964	R3hdm4	86	56.140	ENSPKIG00000007421	r3hdm4	88	53.680	Paramormyrops_kingsleyae
MGP_PahariEiJ_G0030964	R3hdm4	99	50.190	ENSPMGG00000020467	r3hdm4	93	50.201	Periophthalmus_magnuspinnatus
MGP_PahariEiJ_G0030964	R3hdm4	92	94.606	ENSPEMG00000008365	Tmem259	99	94.606	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0030964	R3hdm4	99	52.852	ENSPFOG00000003199	r3hdm4	91	54.321	Poecilia_formosa
MGP_PahariEiJ_G0030964	R3hdm4	99	52.852	ENSPMEG00000014183	r3hdm4	91	54.321	Poecilia_mexicana
MGP_PahariEiJ_G0030964	R3hdm4	99	53.612	ENSPREG00000010709	r3hdm4	99	52.471	Poecilia_reticulata
MGP_PahariEiJ_G0030964	R3hdm4	100	83.146	ENSPPYG00000009297	R3HDM4	99	82.022	Pongo_abelii
MGP_PahariEiJ_G0030964	R3hdm4	57	86.093	ENSPCAG00000010997	R3HDM4	55	81.457	Procavia_capensis
MGP_PahariEiJ_G0030964	R3hdm4	100	83.643	ENSPCOG00000016785	R3HDM4	99	82.528	Propithecus_coquereli
MGP_PahariEiJ_G0030964	R3hdm4	89	54.468	ENSPNYG00000017489	r3hdm4	91	54.894	Pundamilia_nyererei
MGP_PahariEiJ_G0030964	R3hdm4	100	95.437	ENSRNOG00000011489	R3hdm4	100	95.437	Rattus_norvegicus
MGP_PahariEiJ_G0030964	R3hdm4	92	88.843	ENSRROG00000028842	R3HDM4	90	87.603	Rhinopithecus_roxellana
MGP_PahariEiJ_G0030964	R3hdm4	93	84.800	ENSSBOG00000019298	R3HDM4	73	84.000	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0030964	R3hdm4	55	68.966	ENSSHAG00000003036	-	99	68.276	Sarcophilus_harrisii
MGP_PahariEiJ_G0030964	R3hdm4	89	53.191	ENSSFOG00015020574	r3hdm4	86	51.915	Scleropages_formosus
MGP_PahariEiJ_G0030964	R3hdm4	89	54.701	ENSSMAG00000021090	r3hdm4	67	54.274	Scophthalmus_maximus
MGP_PahariEiJ_G0030964	R3hdm4	89	55.745	ENSSDUG00000008488	r3hdm4	91	55.319	Seriola_dumerili
MGP_PahariEiJ_G0030964	R3hdm4	89	55.745	ENSSLDG00000025328	r3hdm4	91	55.319	Seriola_lalandi_dorsalis
MGP_PahariEiJ_G0030964	R3hdm4	96	65.354	ENSSPUG00000005434	R3HDM4	99	64.173	Sphenodon_punctatus
MGP_PahariEiJ_G0030964	R3hdm4	89	52.743	ENSSPAG00000002562	r3hdm4	90	52.321	Stegastes_partitus
MGP_PahariEiJ_G0030964	R3hdm4	100	83.026	ENSSSCG00000013419	R3HDM4	99	81.919	Sus_scrofa
MGP_PahariEiJ_G0030964	R3hdm4	78	63.636	ENSTGUG00000000663	R3HDM4	100	62.201	Taeniopygia_guttata
MGP_PahariEiJ_G0030964	R3hdm4	92	82.988	ENSTTRG00000001470	R3HDM4	99	81.328	Tursiops_truncatus
MGP_PahariEiJ_G0030964	R3hdm4	100	72.694	ENSUAMG00000005751	R3HDM4	99	85.135	Ursus_americanus
MGP_PahariEiJ_G0030964	R3hdm4	100	82.657	ENSVVUG00000022685	R3HDM4	99	81.550	Vulpes_vulpes
MGP_PahariEiJ_G0030964	R3hdm4	89	48.101	ENSXETG00000033624	R3HDM4	91	47.863	Xenopus_tropicalis
MGP_PahariEiJ_G0030964	R3hdm4	99	53.030	ENSXCOG00000005127	r3hdm4	99	52.273	Xiphophorus_couchianus
MGP_PahariEiJ_G0030964	R3hdm4	99	53.232	ENSXMAG00000022875	r3hdm4	99	52.471	Xiphophorus_maculatus