EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0031135 (Gene tree)
Gene ID: 110326563
Gene Symbol: Rab5b
Alias: C030027M18Rik
Full Name: RAB5B%2C member RAS oncogene family
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Plus strand
Length: 19178 bases
Position: chr9:48402986-48422163
Accession: 110326563
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0087482	MMR_HSR1	PF01926.23	0.00025	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0087482	-	3126	XM_021205093	MGP_PahariEiJ_P0087482	215 (aa)	XP_021060752	UPI000000125D

Gene Model

Click here to download MGP_PahariEiJ_G0031135's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0031135's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PahariEiJ_G0031135	Rab5b	77	45.783	MGP_PahariEiJ_G0015453	Rab6b	80	45.783
MGP_PahariEiJ_G0031135	Rab5b	97	86.124	MGP_PahariEiJ_G0018314	Rab5c	97	86.124
MGP_PahariEiJ_G0031135	Rab5b	75	47.205	MGP_PahariEiJ_G0015211	Rab11a	88	48.889
MGP_PahariEiJ_G0031135	Rab5b	85	35.326	MGP_PahariEiJ_G0020826	Rab12	76	35.326
MGP_PahariEiJ_G0031135	Rab5b	82	45.198	MGP_PahariEiJ_G0014033	Rab1b	87	45.198
MGP_PahariEiJ_G0031135	Rab5b	82	39.344	MGP_PahariEiJ_G0026417	Rab33b	79	39.344
MGP_PahariEiJ_G0031135	Rab5b	83	37.705	MGP_PahariEiJ_G0031589	Rab33a	77	37.705
MGP_PahariEiJ_G0031135	Rab5b	78	42.442	MGP_PahariEiJ_G0022362	Rab7	90	47.727
MGP_PahariEiJ_G0031135	Rab5b	90	37.949	MGP_PahariEiJ_G0024212	Rab35	96	37.949
MGP_PahariEiJ_G0031135	Rab5b	91	47.449	MGP_PahariEiJ_G0020817	Rab31	98	47.449
MGP_PahariEiJ_G0031135	Rab5b	75	44.720	MGP_PahariEiJ_G0024934	Rab14	75	44.720
MGP_PahariEiJ_G0031135	Rab5b	73	35.000	MGP_PahariEiJ_G0030851	Rab36	60	35.000
MGP_PahariEiJ_G0031135	Rab5b	82	32.787	MGP_PahariEiJ_G0013880	Hras	96	32.787
MGP_PahariEiJ_G0031135	Rab5b	62	30.986	MGP_PahariEiJ_G0022456	Arl8b	73	30.986
MGP_PahariEiJ_G0031135	Rab5b	77	45.181	MGP_PahariEiJ_G0013273	Rab6a	80	45.181
MGP_PahariEiJ_G0031135	Rab5b	87	82.258	MGP_PahariEiJ_G0020730	Rab5a	99	82.258
MGP_PahariEiJ_G0031135	Rab5b	78	42.857	MGP_PahariEiJ_G0013212	Rab30	83	42.857
MGP_PahariEiJ_G0031135	Rab5b	74	37.195	MGP_PahariEiJ_G0020181	Rabl2	72	37.195
MGP_PahariEiJ_G0031135	Rab5b	82	33.333	MGP_PahariEiJ_G0021797	Rheb	93	33.333
MGP_PahariEiJ_G0031135	Rab5b	90	38.462	MGP_PahariEiJ_G0018716	Rab18	93	38.462
MGP_PahariEiJ_G0031135	Rab5b	90	39.048	MGP_PahariEiJ_G0030259	Rab2b	97	39.048
MGP_PahariEiJ_G0031135	Rab5b	55	30.159	MGP_PahariEiJ_G0029472	Arl4a	60	30.159
MGP_PahariEiJ_G0031135	Rab5b	74	36.875	MGP_PahariEiJ_G0027261	Rab23	67	36.875
MGP_PahariEiJ_G0031135	Rab5b	87	36.702	MGP_PahariEiJ_G0026671	Rab13	93	36.702
MGP_PahariEiJ_G0031135	Rab5b	62	30.986	MGP_PahariEiJ_G0027868	Arl8a	73	30.986
MGP_PahariEiJ_G0031135	Rab5b	84	30.220	MGP_PahariEiJ_G0026889	Nras	99	33.333
MGP_PahariEiJ_G0031135	Rab5b	82	36.932	MGP_PahariEiJ_G0029630	Rab15	83	36.932
MGP_PahariEiJ_G0031135	Rab5b	91	42.079	MGP_PahariEiJ_G0026616	Rab25	94	42.079
MGP_PahariEiJ_G0031135	Rab5b	94	41.827	MGP_PahariEiJ_G0018517	Rab37	93	41.827
MGP_PahariEiJ_G0031135	Rab5b	91	37.949	MGP_PahariEiJ_G0023919	Rab2a	76	43.478
MGP_PahariEiJ_G0031135	Rab5b	76	32.727	MGP_PahariEiJ_G0022808	Kras	88	32.335
MGP_PahariEiJ_G0031135	Rab5b	91	43.689	MGP_PahariEiJ_G0020420	Rab11b	94	43.689
MGP_PahariEiJ_G0031135	Rab5b	90	47.938	MGP_PahariEiJ_G0026193	Rab22a	98	47.938
MGP_PahariEiJ_G0031135	Rab5b	90	43.367	MGP_PahariEiJ_G0016776	Rab1a	95	43.367
MGP_PahariEiJ_G0031135	Rab5b	93	35.294	MGP_PahariEiJ_G0032112	Rab9	99	35.294
MGP_PahariEiJ_G0031135	Rab5b	90	35.323	MGP_PahariEiJ_G0031967	Rab9b	97	35.323

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0031135	Rab5b	100	100.000	ENSG00000111540	RAB5B	100	100.000	Homo_sapiens
MGP_PahariEiJ_G0031135	Rab5b	100	98.618	ENSAMEG00000003196	RAB5B	100	98.618	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0031135	Rab5b	100	96.279	ENSACAG00000005380	RAB5B	100	96.279	Anolis_carolinensis
MGP_PahariEiJ_G0031135	Rab5b	100	100.000	ENSANAG00000033215	RAB5B	95	100.000	Aotus_nancymaae
MGP_PahariEiJ_G0031135	Rab5b	100	99.535	ENSBTAG00000014129	RAB5B	100	99.535	Bos_taurus
MGP_PahariEiJ_G0031135	Rab5b	100	100.000	ENSCJAG00000041780	RAB5B	95	100.000	Callithrix_jacchus
MGP_PahariEiJ_G0031135	Rab5b	100	100.000	ENSCAFG00000000087	RAB5B	100	100.000	Canis_familiaris
MGP_PahariEiJ_G0031135	Rab5b	100	100.000	ENSCAFG00020026094	RAB5B	100	100.000	Canis_lupus_dingo
MGP_PahariEiJ_G0031135	Rab5b	97	100.000	ENSCHIG00000010333	RAB5B	96	100.000	Capra_hircus
MGP_PahariEiJ_G0031135	Rab5b	100	99.535	ENSTSYG00000009576	RAB5B	100	99.535	Carlito_syrichta
MGP_PahariEiJ_G0031135	Rab5b	100	100.000	ENSCPOG00000034818	RAB5B	100	100.000	Cavia_porcellus
MGP_PahariEiJ_G0031135	Rab5b	100	99.070	ENSCCAG00000019480	RAB5B	100	99.070	Cebus_capucinus
MGP_PahariEiJ_G0031135	Rab5b	83	99.441	ENSCATG00000034978	RAB5B	98	99.441	Cercocebus_atys
MGP_PahariEiJ_G0031135	Rab5b	100	99.070	ENSCSAG00000005277	RAB5B	100	99.070	Chlorocebus_sabaeus
MGP_PahariEiJ_G0031135	Rab5b	100	96.279	ENSCPBG00000012712	RAB5B	100	96.279	Chrysemys_picta_bellii
MGP_PahariEiJ_G0031135	Rab5b	100	99.535	ENSCGRG00001000428	Rab5b	100	99.535	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0031135	Rab5b	100	99.535	ENSCGRG00000009508	-	100	99.535	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0031135	Rab5b	100	100.000	ENSDORG00000025063	Rab5b	100	100.000	Dipodomys_ordii
MGP_PahariEiJ_G0031135	Rab5b	100	99.535	ENSECAG00000023306	RAB5B	100	99.535	Equus_caballus
MGP_PahariEiJ_G0031135	Rab5b	100	99.070	ENSEEUG00000006745	RAB5B	100	99.070	Erinaceus_europaeus
MGP_PahariEiJ_G0031135	Rab5b	100	100.000	ENSFDAG00000008326	RAB5B	100	100.000	Fukomys_damarensis
MGP_PahariEiJ_G0031135	Rab5b	100	99.070	ENSHGLG00000005995	RAB5B	100	99.070	Heterocephalus_glaber_female
MGP_PahariEiJ_G0031135	Rab5b	100	99.070	ENSHGLG00100012955	RAB5B	100	99.070	Heterocephalus_glaber_male
MGP_PahariEiJ_G0031135	Rab5b	100	98.605	ENSSTOG00000010536	RAB5B	100	98.605	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0031135	Rab5b	100	99.535	ENSJJAG00000019506	Rab5b	100	99.535	Jaculus_jaculus
MGP_PahariEiJ_G0031135	Rab5b	100	99.078	ENSLAFG00000018009	RAB5B	95	99.078	Loxodonta_africana
MGP_PahariEiJ_G0031135	Rab5b	100	99.070	ENSMFAG00000029992	RAB5B	100	99.070	Macaca_fascicularis
MGP_PahariEiJ_G0031135	Rab5b	100	99.070	ENSMMUG00000031853	RAB5B	100	99.070	Macaca_mulatta
MGP_PahariEiJ_G0031135	Rab5b	100	99.070	ENSMNEG00000005338	RAB5B	100	99.070	Macaca_nemestrina
MGP_PahariEiJ_G0031135	Rab5b	100	99.070	ENSMLEG00000034462	RAB5B	100	99.070	Mandrillus_leucophaeus
MGP_PahariEiJ_G0031135	Rab5b	100	100.000	ENSMAUG00000011613	Rab5b	100	100.000	Mesocricetus_auratus
MGP_PahariEiJ_G0031135	Rab5b	100	99.535	ENSMICG00000011086	RAB5B	100	99.535	Microcebus_murinus
MGP_PahariEiJ_G0031135	Rab5b	100	100.000	ENSMUSG00000000711	Rab5b	100	100.000	Mus_musculus
MGP_PahariEiJ_G0031135	Rab5b	100	99.535	MGP_SPRETEiJ_G0016774	Rab5b	100	99.535	Mus_spretus
MGP_PahariEiJ_G0031135	Rab5b	99	98.611	ENSMPUG00000000946	RAB5B	89	98.611	Mustela_putorius_furo
MGP_PahariEiJ_G0031135	Rab5b	100	100.000	ENSNLEG00000017570	-	100	100.000	Nomascus_leucogenys
MGP_PahariEiJ_G0031135	Rab5b	100	100.000	ENSOPRG00000007883	RAB5B	100	100.000	Ochotona_princeps
MGP_PahariEiJ_G0031135	Rab5b	100	99.535	ENSODEG00000003860	RAB5B	100	99.535	Octodon_degus
MGP_PahariEiJ_G0031135	Rab5b	100	100.000	ENSOCUG00000013895	RAB5B	95	100.000	Oryctolagus_cuniculus
MGP_PahariEiJ_G0031135	Rab5b	100	100.000	ENSOARG00000010651	RAB5B	95	100.000	Ovis_aries
MGP_PahariEiJ_G0031135	Rab5b	100	100.000	ENSPPAG00000035431	RAB5B	100	100.000	Pan_paniscus
MGP_PahariEiJ_G0031135	Rab5b	100	100.000	ENSPTRG00000005071	RAB5B	97	99.522	Pan_troglodytes
MGP_PahariEiJ_G0031135	Rab5b	99	98.131	ENSPANG00000021075	RAB5B	97	98.131	Papio_anubis
MGP_PahariEiJ_G0031135	Rab5b	100	100.000	ENSPCOG00000016461	RAB5B	100	100.000	Propithecus_coquereli
MGP_PahariEiJ_G0031135	Rab5b	100	99.070	ENSRNOG00000006130	Rab5b	100	99.070	Rattus_norvegicus
MGP_PahariEiJ_G0031135	Rab5b	100	99.070	ENSRBIG00000013165	RAB5B	100	99.070	Rhinopithecus_bieti
MGP_PahariEiJ_G0031135	Rab5b	100	99.070	ENSRROG00000037973	RAB5B	100	99.070	Rhinopithecus_roxellana
MGP_PahariEiJ_G0031135	Rab5b	100	83.256	ENSSBOG00000035419	RAB5B	100	83.256	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0031135	Rab5b	100	98.605	ENSSHAG00000007727	RAB5B	100	98.605	Sarcophilus_harrisii
MGP_PahariEiJ_G0031135	Rab5b	100	100.000	ENSSARG00000006237	RAB5B	100	100.000	Sorex_araneus
MGP_PahariEiJ_G0031135	Rab5b	100	96.279	ENSSPUG00000014873	RAB5B	100	96.279	Sphenodon_punctatus
MGP_PahariEiJ_G0031135	Rab5b	100	100.000	ENSTTRG00000015001	RAB5B	100	100.000	Tursiops_truncatus
MGP_PahariEiJ_G0031135	Rab5b	100	99.535	ENSUAMG00000014651	RAB5B	100	99.535	Ursus_americanus
MGP_PahariEiJ_G0031135	Rab5b	100	99.535	ENSUMAG00000016263	RAB5B	100	99.535	Ursus_maritimus
MGP_PahariEiJ_G0031135	Rab5b	68	100.000	ENSVVUG00000022054	RAB5B	81	100.000	Vulpes_vulpes