EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0031212 (Gene tree)
Gene ID: 110326522
Gene Symbol: Tsfm
Alias: 2310050B20Rik|9430024O13Rik|EF-TS|EF-Tsmt
Full Name: Ts translation elongation factor%2C mitochondrial
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Plus strand
Length: 19176 bases
Position: chr9:50076267-50095442
Accession: 110326522
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0087709	EF_TS	PF00889.19	4e-27	1	1
MGP_PahariEiJ_P0087712	EF_TS	PF00889.19	1.8e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0087710	-	695	-	-	- (aa)	-	-
MGP_PahariEiJ_T0087711	-	662	-	MGP_PahariEiJ_P0087711	208 (aa)	-	-
MGP_PahariEiJ_T0087712	-	1235	-	MGP_PahariEiJ_P0087712	193 (aa)	-	-
MGP_PahariEiJ_T0087713	-	695	-	-	- (aa)	-	-
MGP_PahariEiJ_T0087714	-	830	-	-	- (aa)	-	-
MGP_PahariEiJ_T0087715	-	641	-	-	- (aa)	-	-
MGP_PahariEiJ_T0087709	-	1199	XM_021205036	MGP_PahariEiJ_P0087709	324 (aa)	XP_021060695	-

Gene Model

Click here to download MGP_PahariEiJ_G0031212's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0031212's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0031212	Tsfm	99	84.375	ENSG00000123297	TSFM	100	92.857	Homo_sapiens
MGP_PahariEiJ_G0031212	Tsfm	96	54.839	ENSAPOG00000014844	tsfm	97	53.055	Acanthochromis_polyacanthus
MGP_PahariEiJ_G0031212	Tsfm	99	84.375	ENSAMEG00000005452	TSFM	100	84.923	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0031212	Tsfm	96	55.376	ENSACIG00000001066	tsfm	98	53.376	Amphilophus_citrinellus
MGP_PahariEiJ_G0031212	Tsfm	96	52.973	ENSAOCG00000007132	tsfm	97	52.412	Amphiprion_ocellaris
MGP_PahariEiJ_G0031212	Tsfm	96	53.055	ENSAPEG00000015755	tsfm	97	53.055	Amphiprion_percula
MGP_PahariEiJ_G0031212	Tsfm	96	54.839	ENSATEG00000001497	tsfm	99	52.038	Anabas_testudineus
MGP_PahariEiJ_G0031212	Tsfm	87	68.881	ENSACAG00000013044	TSFM	87	68.881	Anolis_carolinensis
MGP_PahariEiJ_G0031212	Tsfm	99	85.417	ENSANAG00000038019	TSFM	100	85.846	Aotus_nancymaae
MGP_PahariEiJ_G0031212	Tsfm	96	55.914	ENSACLG00000000139	tsfm	99	53.145	Astatotilapia_calliptera
MGP_PahariEiJ_G0031212	Tsfm	94	50.645	ENSAMXG00000001713	tsfm	97	50.645	Astyanax_mexicanus
MGP_PahariEiJ_G0031212	Tsfm	93	86.755	ENSBTAG00000016912	TSFM	88	81.121	Bos_taurus
MGP_PahariEiJ_G0031212	Tsfm	84	34.333	WBGene00010094	tsfm-1	92	34.333	Caenorhabditis_elegans
MGP_PahariEiJ_G0031212	Tsfm	99	84.456	ENSCJAG00000006600	TSFM	100	85.276	Callithrix_jacchus
MGP_PahariEiJ_G0031212	Tsfm	86	85.357	ENSCAFG00000000293	-	93	83.278	Canis_familiaris
MGP_PahariEiJ_G0031212	Tsfm	86	85.357	ENSCAFG00020022844	TSFM	73	83.278	Canis_lupus_dingo
MGP_PahariEiJ_G0031212	Tsfm	93	86.424	ENSCHIG00000013850	TSFM	100	83.951	Capra_hircus
MGP_PahariEiJ_G0031212	Tsfm	73	88.511	ENSTSYG00000028892	TSFM	94	87.755	Carlito_syrichta
MGP_PahariEiJ_G0031212	Tsfm	60	72.539	ENSCAPG00000007733	-	100	72.195	Cavia_aperea
MGP_PahariEiJ_G0031212	Tsfm	91	86.195	ENSCPOG00000037732	TSFM	100	84.404	Cavia_porcellus
MGP_PahariEiJ_G0031212	Tsfm	98	85.864	ENSCCAG00000033254	TSFM	100	85.231	Cebus_capucinus
MGP_PahariEiJ_G0031212	Tsfm	99	85.417	ENSCATG00000016867	TSFM	100	86.154	Cercocebus_atys
MGP_PahariEiJ_G0031212	Tsfm	93	78.808	ENSCLAG00000009226	TSFM	100	78.154	Chinchilla_lanigera
MGP_PahariEiJ_G0031212	Tsfm	99	85.417	ENSCSAG00000004601	TSFM	100	86.154	Chlorocebus_sabaeus
MGP_PahariEiJ_G0031212	Tsfm	74	86.620	ENSCHOG00000002360	TSFM	81	86.765	Choloepus_hoffmanni
MGP_PahariEiJ_G0031212	Tsfm	90	72.054	ENSCPBG00000018147	TSFM	88	72.054	Chrysemys_picta_bellii
MGP_PahariEiJ_G0031212	Tsfm	86	34.091	ENSCING00000001275	-	91	34.091	Ciona_intestinalis
MGP_PahariEiJ_G0031212	Tsfm	74	33.566	ENSCSAVG00000007722	-	99	32.870	Ciona_savignyi
MGP_PahariEiJ_G0031212	Tsfm	80	85.271	ENSCANG00000030298	TSFM	92	89.516	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0031212	Tsfm	99	90.052	ENSCGRG00001023000	TSFM	100	88.037	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0031212	Tsfm	99	90.052	ENSCGRG00000006566	TSFM	100	88.037	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0031212	Tsfm	74	53.750	ENSCSEG00000003376	tsfm	82	53.750	Cynoglossus_semilaevis
MGP_PahariEiJ_G0031212	Tsfm	89	56.571	ENSCVAG00000001340	tsfm	97	52.303	Cyprinodon_variegatus
MGP_PahariEiJ_G0031212	Tsfm	90	56.322	ENSDARG00000060748	tsfm	97	51.333	Danio_rerio
MGP_PahariEiJ_G0031212	Tsfm	99	80.729	ENSDNOG00000049415	TSFM	100	82.462	Dasypus_novemcinctus
MGP_PahariEiJ_G0031212	Tsfm	77	86.290	ENSDORG00000007272	Tsfm	94	86.290	Dipodomys_ordii
MGP_PahariEiJ_G0031212	Tsfm	85	40.214	FBgn0032646	mEFTs	87	40.214	Drosophila_melanogaster
MGP_PahariEiJ_G0031212	Tsfm	97	80.635	ENSETEG00000002686	-	100	80.000	Echinops_telfairi
MGP_PahariEiJ_G0031212	Tsfm	96	80.122	ENSEASG00005007292	TSFM	83	79.941	Equus_asinus_asinus
MGP_PahariEiJ_G0031212	Tsfm	90	86.254	ENSECAG00000010520	TSFM	83	85.809	Equus_caballus
MGP_PahariEiJ_G0031212	Tsfm	98	74.603	ENSEEUG00000004147	-	100	74.603	Erinaceus_europaeus
MGP_PahariEiJ_G0031212	Tsfm	81	57.197	ENSELUG00000015481	tsfm	96	53.968	Esox_lucius
MGP_PahariEiJ_G0031212	Tsfm	89	86.851	ENSFCAG00000023794	TSFM	100	83.692	Felis_catus
MGP_PahariEiJ_G0031212	Tsfm	100	82.462	ENSFDAG00000016548	TSFM	100	82.462	Fukomys_damarensis
MGP_PahariEiJ_G0031212	Tsfm	96	54.301	ENSFHEG00000013458	tsfm	98	52.564	Fundulus_heteroclitus
MGP_PahariEiJ_G0031212	Tsfm	85	52.920	ENSGMOG00000000868	tsfm	93	52.920	Gadus_morhua
MGP_PahariEiJ_G0031212	Tsfm	96	53.226	ENSGAFG00000021764	tsfm	98	52.564	Gambusia_affinis
MGP_PahariEiJ_G0031212	Tsfm	90	51.020	ENSGACG00000000697	tsfm	92	52.330	Gasterosteus_aculeatus
MGP_PahariEiJ_G0031212	Tsfm	92	71.523	ENSGAGG00000020897	TSFM	89	71.523	Gopherus_agassizii
MGP_PahariEiJ_G0031212	Tsfm	99	85.417	ENSGGOG00000001415	TSFM	100	86.462	Gorilla_gorilla
MGP_PahariEiJ_G0031212	Tsfm	96	55.376	ENSHBUG00000021738	tsfm	99	52.830	Haplochromis_burtoni
MGP_PahariEiJ_G0031212	Tsfm	94	85.294	ENSHGLG00000008559	TSFM	100	83.692	Heterocephalus_glaber_female
MGP_PahariEiJ_G0031212	Tsfm	94	85.294	ENSHGLG00100005643	TSFM	100	83.692	Heterocephalus_glaber_male
MGP_PahariEiJ_G0031212	Tsfm	85	54.380	ENSHCOG00000021049	tsfm	88	54.380	Hippocampus_comes
MGP_PahariEiJ_G0031212	Tsfm	61	64.407	ENSHCOG00000019566	-	78	68.519	Hippocampus_comes
MGP_PahariEiJ_G0031212	Tsfm	92	42.140	ENSIPUG00000019836	tsfm	86	42.140	Ictalurus_punctatus
MGP_PahariEiJ_G0031212	Tsfm	94	85.621	ENSSTOG00000001159	TSFM	100	84.000	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0031212	Tsfm	99	81.481	ENSJJAG00000012907	Tsfm	99	81.481	Jaculus_jaculus
MGP_PahariEiJ_G0031212	Tsfm	93	52.805	ENSKMAG00000018906	tsfm	96	52.805	Kryptolebias_marmoratus
MGP_PahariEiJ_G0031212	Tsfm	96	54.054	ENSLBEG00000019779	tsfm	97	52.412	Labrus_bergylta
MGP_PahariEiJ_G0031212	Tsfm	99	63.415	ENSLACG00000018125	TSFM	99	63.415	Latimeria_chalumnae
MGP_PahariEiJ_G0031212	Tsfm	90	43.709	ENSLOCG00000006608	tsfm	91	44.702	Lepisosteus_oculatus
MGP_PahariEiJ_G0031212	Tsfm	97	85.032	ENSLAFG00000015177	TSFM	100	84.308	Loxodonta_africana
MGP_PahariEiJ_G0031212	Tsfm	99	85.417	ENSMFAG00000036132	TSFM	100	86.154	Macaca_fascicularis
MGP_PahariEiJ_G0031212	Tsfm	99	85.417	ENSMMUG00000005893	TSFM	100	86.154	Macaca_mulatta
MGP_PahariEiJ_G0031212	Tsfm	99	85.417	ENSMNEG00000026351	TSFM	100	86.154	Macaca_nemestrina
MGP_PahariEiJ_G0031212	Tsfm	99	84.896	ENSMLEG00000029811	TSFM	100	85.846	Mandrillus_leucophaeus
MGP_PahariEiJ_G0031212	Tsfm	95	57.838	ENSMAMG00000002230	tsfm	97	54.984	Mastacembelus_armatus
MGP_PahariEiJ_G0031212	Tsfm	96	55.376	ENSMZEG00005008170	tsfm	99	52.830	Maylandia_zebra
MGP_PahariEiJ_G0031212	Tsfm	99	89.005	ENSMAUG00000011705	Tsfm	100	87.692	Mesocricetus_auratus
MGP_PahariEiJ_G0031212	Tsfm	99	82.902	ENSMICG00000003812	TSFM	100	83.742	Microcebus_murinus
MGP_PahariEiJ_G0031212	Tsfm	99	91.099	ENSMOCG00000006104	Tsfm	100	90.432	Microtus_ochrogaster
MGP_PahariEiJ_G0031212	Tsfm	89	53.979	ENSMMOG00000021854	tsfm	91	53.979	Mola_mola
MGP_PahariEiJ_G0031212	Tsfm	100	72.923	ENSMODG00000021351	TSFM	95	72.923	Monodelphis_domestica
MGP_PahariEiJ_G0031212	Tsfm	93	52.333	ENSMALG00000015046	tsfm	94	52.333	Monopterus_albus
MGP_PahariEiJ_G0031212	Tsfm	100	97.927	MGP_CAROLIEiJ_G0015873	Tsfm	100	97.927	Mus_caroli
MGP_PahariEiJ_G0031212	Tsfm	100	98.446	ENSMUSG00000040521	Tsfm	100	98.446	Mus_musculus
MGP_PahariEiJ_G0031212	Tsfm	100	97.927	MGP_SPRETEiJ_G0016699	Tsfm	100	97.927	Mus_spretus
MGP_PahariEiJ_G0031212	Tsfm	98	85.789	ENSMPUG00000002051	TSFM	99	85.449	Mustela_putorius_furo
MGP_PahariEiJ_G0031212	Tsfm	87	87.279	ENSMLUG00000005940	TSFM	100	83.951	Myotis_lucifugus
MGP_PahariEiJ_G0031212	Tsfm	100	84.049	ENSNGAG00000014356	Tsfm	100	84.049	Nannospalax_galili
MGP_PahariEiJ_G0031212	Tsfm	96	55.376	ENSNBRG00000016413	tsfm	99	52.516	Neolamprologus_brichardi
MGP_PahariEiJ_G0031212	Tsfm	99	86.458	ENSNLEG00000017178	TSFM	100	87.385	Nomascus_leucogenys
MGP_PahariEiJ_G0031212	Tsfm	75	79.528	ENSMEUG00000004047	TSFM	70	79.528	Notamacropus_eugenii
MGP_PahariEiJ_G0031212	Tsfm	97	76.786	ENSOPRG00000006670	TSFM	100	76.879	Ochotona_princeps
MGP_PahariEiJ_G0031212	Tsfm	99	80.208	ENSODEG00000001882	TSFM	100	81.231	Octodon_degus
MGP_PahariEiJ_G0031212	Tsfm	97	46.372	ENSONIG00000019100	tsfm	98	46.372	Oreochromis_niloticus
MGP_PahariEiJ_G0031212	Tsfm	93	73.762	ENSOCUG00000012512	TSFM	75	78.370	Oryctolagus_cuniculus
MGP_PahariEiJ_G0031212	Tsfm	96	50.804	ENSORLG00000030201	tsfm	98	50.804	Oryzias_latipes
MGP_PahariEiJ_G0031212	Tsfm	88	53.310	ENSORLG00020004740	tsfm	98	50.482	Oryzias_latipes_hni
MGP_PahariEiJ_G0031212	Tsfm	88	53.310	ENSORLG00015022703	tsfm	98	49.839	Oryzias_latipes_hsok
MGP_PahariEiJ_G0031212	Tsfm	89	52.941	ENSOMEG00000008934	tsfm	90	52.941	Oryzias_melastigma
MGP_PahariEiJ_G0031212	Tsfm	99	82.462	ENSOGAG00000012235	TSFM	99	82.462	Otolemur_garnettii
MGP_PahariEiJ_G0031212	Tsfm	93	86.755	ENSOARG00000005095	TSFM	100	81.416	Ovis_aries
MGP_PahariEiJ_G0031212	Tsfm	99	85.417	ENSPPAG00000043428	TSFM	100	86.154	Pan_paniscus
MGP_PahariEiJ_G0031212	Tsfm	89	86.851	ENSPPRG00000009667	TSFM	100	83.692	Panthera_pardus
MGP_PahariEiJ_G0031212	Tsfm	89	87.197	ENSPTIG00000015290	TSFM	100	84.000	Panthera_tigris_altaica
MGP_PahariEiJ_G0031212	Tsfm	99	85.417	ENSPTRG00000005152	TSFM	100	86.154	Pan_troglodytes
MGP_PahariEiJ_G0031212	Tsfm	98	85.864	ENSPANG00000007866	TSFM	98	85.174	Papio_anubis
MGP_PahariEiJ_G0031212	Tsfm	84	54.015	ENSPKIG00000008495	tsfm	85	54.015	Paramormyrops_kingsleyae
MGP_PahariEiJ_G0031212	Tsfm	64	70.892	ENSPSIG00000015776	TSFM	96	70.892	Pelodiscus_sinensis
MGP_PahariEiJ_G0031212	Tsfm	89	51.370	ENSPMGG00000007022	tsfm	92	51.370	Periophthalmus_magnuspinnatus
MGP_PahariEiJ_G0031212	Tsfm	98	88.421	ENSPEMG00000000414	Tsfm	100	88.272	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0031212	Tsfm	100	74.074	ENSPCIG00000023619	TSFM	100	74.074	Phascolarctos_cinereus
MGP_PahariEiJ_G0031212	Tsfm	96	52.941	ENSPFOG00000010782	tsfm	98	52.244	Poecilia_formosa
MGP_PahariEiJ_G0031212	Tsfm	91	53.535	ENSPLAG00000008105	tsfm	94	53.872	Poecilia_latipinna
MGP_PahariEiJ_G0031212	Tsfm	96	52.688	ENSPMEG00000002567	tsfm	98	52.244	Poecilia_mexicana
MGP_PahariEiJ_G0031212	Tsfm	96	52.151	ENSPREG00000016696	tsfm	98	52.244	Poecilia_reticulata
MGP_PahariEiJ_G0031212	Tsfm	99	85.938	ENSPPYG00000004708	TSFM	85	86.769	Pongo_abelii
MGP_PahariEiJ_G0031212	Tsfm	92	82.903	ENSPCAG00000003789	TSFM	100	81.250	Procavia_capensis
MGP_PahariEiJ_G0031212	Tsfm	91	86.395	ENSPCOG00000021606	TSFM	100	84.049	Propithecus_coquereli
MGP_PahariEiJ_G0031212	Tsfm	91	87.755	ENSPVAG00000012141	TSFM	100	85.231	Pteropus_vampyrus
MGP_PahariEiJ_G0031212	Tsfm	96	55.376	ENSPNYG00000001230	tsfm	99	52.830	Pundamilia_nyererei
MGP_PahariEiJ_G0031212	Tsfm	93	54.144	ENSPNAG00000003241	tsfm	98	51.613	Pygocentrus_nattereri
MGP_PahariEiJ_G0031212	Tsfm	98	95.789	ENSRNOG00000048843	Tsfm	100	86.420	Rattus_norvegicus
MGP_PahariEiJ_G0031212	Tsfm	90	89.041	ENSRBIG00000037278	TSFM	100	86.462	Rhinopithecus_bieti
MGP_PahariEiJ_G0031212	Tsfm	99	86.458	ENSRROG00000031769	TSFM	100	86.769	Rhinopithecus_roxellana
MGP_PahariEiJ_G0031212	Tsfm	96	73.482	ENSSBOG00000021465	TSFM	100	73.231	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0031212	Tsfm	100	72.807	ENSSHAG00000009664	TSFM	100	72.807	Sarcophilus_harrisii
MGP_PahariEiJ_G0031212	Tsfm	85	55.474	ENSSFOG00015014457	tsfm	88	55.474	Scleropages_formosus
MGP_PahariEiJ_G0031212	Tsfm	94	54.396	ENSSMAG00000002467	tsfm	96	53.465	Scophthalmus_maximus
MGP_PahariEiJ_G0031212	Tsfm	96	55.135	ENSSDUG00000006833	tsfm	97	52.733	Seriola_dumerili
MGP_PahariEiJ_G0031212	Tsfm	61	36.667	ENSSLDG00000005996	-	73	36.667	Seriola_lalandi_dorsalis
MGP_PahariEiJ_G0031212	Tsfm	97	54.011	ENSSLDG00000000715	tsfm	98	52.396	Seriola_lalandi_dorsalis
MGP_PahariEiJ_G0031212	Tsfm	78	70.558	ENSSARG00000000785	-	85	69.903	Sorex_araneus
MGP_PahariEiJ_G0031212	Tsfm	85	69.286	ENSSPUG00000006435	TSFM	100	69.286	Sphenodon_punctatus
MGP_PahariEiJ_G0031212	Tsfm	96	54.054	ENSSPAG00000002548	tsfm	97	52.733	Stegastes_partitus
MGP_PahariEiJ_G0031212	Tsfm	97	82.979	ENSSSCG00000037767	TSFM	88	82.006	Sus_scrofa
MGP_PahariEiJ_G0031212	Tsfm	89	56.055	ENSTRUG00000003081	tsfm	93	56.055	Takifugu_rubripes
MGP_PahariEiJ_G0031212	Tsfm	92	54.181	ENSTNIG00000014578	tsfm	95	54.181	Tetraodon_nigroviridis
MGP_PahariEiJ_G0031212	Tsfm	97	71.726	ENSTBEG00000011603	TSFM	100	71.965	Tupaia_belangeri
MGP_PahariEiJ_G0031212	Tsfm	94	87.459	ENSTTRG00000008351	TSFM	100	83.537	Tursiops_truncatus
MGP_PahariEiJ_G0031212	Tsfm	90	87.629	ENSUAMG00000013142	TSFM	100	84.308	Ursus_americanus
MGP_PahariEiJ_G0031212	Tsfm	90	87.285	ENSUMAG00000020123	TSFM	100	84.000	Ursus_maritimus
MGP_PahariEiJ_G0031212	Tsfm	73	90.099	ENSVPAG00000000209	TSFM	72	90.099	Vicugna_pacos
MGP_PahariEiJ_G0031212	Tsfm	83	84.502	ENSVVUG00000016735	TSFM	91	83.746	Vulpes_vulpes
MGP_PahariEiJ_G0031212	Tsfm	90	64.746	ENSXETG00000009653	tsfm	98	64.746	Xenopus_tropicalis
MGP_PahariEiJ_G0031212	Tsfm	96	53.763	ENSXMAG00000018468	tsfm	98	52.885	Xiphophorus_maculatus