EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0031323 (Gene tree)
Gene ID: 110326720
Gene Symbol: Poc1b
Alias: 4933430F16Rik|Wdr51b
Full Name: POC1 centriolar protein B
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Minus strand
Length: 103873 bases
Position: chr9:75959973-76063845
Accession: 110326720
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0088027	eIF2A	PF08662.11	1.1e-08	1	1
MGP_PahariEiJ_P0088025	eIF2A	PF08662.11	1.4e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0088027	-	1802	-	MGP_PahariEiJ_P0088027	449 (aa)	XP_021060959	UPI000A30D3A1
MGP_PahariEiJ_T0088029	-	355	-	-	- (aa)	-	-
MGP_PahariEiJ_T0088028	-	669	-	-	- (aa)	-	-
MGP_PahariEiJ_T0088030	-	1000	-	MGP_PahariEiJ_P0088030	99 (aa)	-	-
MGP_PahariEiJ_T0088026	-	2903	-	MGP_PahariEiJ_P0088026	476 (aa)	XP_021060958	UPI000A311454
MGP_PahariEiJ_T0088025	-	3509	-	MGP_PahariEiJ_P0088025	434 (aa)	-	-

Gene Model

Click here to download MGP_PahariEiJ_G0031323's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0031323's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PahariEiJ_G0031323	Poc1b	98	51.701	MGP_PahariEiJ_G0015485	Poc1a	94	62.934
MGP_PahariEiJ_G0031323	Poc1b	59	32.520	MGP_PahariEiJ_G0016413	Wdr5b	90	32.520
MGP_PahariEiJ_G0031323	Poc1b	76	30.693	MGP_PahariEiJ_G0026865	Wdr3	60	33.613
MGP_PahariEiJ_G0031323	Poc1b	64	31.683	MGP_PahariEiJ_G0025696	Ciao1	88	39.474
MGP_PahariEiJ_G0031323	Poc1b	65	32.479	MGP_PahariEiJ_G0028413	Prpf4	56	32.479
MGP_PahariEiJ_G0031323	Poc1b	66	30.723	MGP_PahariEiJ_G0023516	Tbl3	71	30.723
MGP_PahariEiJ_G0031323	Poc1b	66	32.558	MGP_PahariEiJ_G0024800	Wdr5	99	30.396
MGP_PahariEiJ_G0031323	Poc1b	67	30.688	MGP_PahariEiJ_G0015101	Wdr61	96	34.211
MGP_PahariEiJ_G0031323	Poc1b	56	33.058	MGP_PahariEiJ_G0023773	Pex7	65	33.058

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0031323	Poc1b	100	81.651	ENSG00000139323	POC1B	100	85.714	Homo_sapiens
MGP_PahariEiJ_G0031323	Poc1b	100	81.007	ENSAMEG00000001812	POC1B	100	81.236	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0031323	Poc1b	100	81.422	ENSANAG00000023816	POC1B	100	81.422	Aotus_nancymaae
MGP_PahariEiJ_G0031323	Poc1b	99	81.379	ENSBTAG00000000687	POC1B	99	81.379	Bos_taurus
MGP_PahariEiJ_G0031323	Poc1b	100	81.651	ENSCJAG00000019637	POC1B	100	81.651	Callithrix_jacchus
MGP_PahariEiJ_G0031323	Poc1b	100	81.651	ENSCAFG00000006105	POC1B	99	81.614	Canis_familiaris
MGP_PahariEiJ_G0031323	Poc1b	100	81.651	ENSCAFG00020016403	POC1B	100	81.651	Canis_lupus_dingo
MGP_PahariEiJ_G0031323	Poc1b	99	81.839	ENSCHIG00000026402	POC1B	99	81.556	Capra_hircus
MGP_PahariEiJ_G0031323	Poc1b	85	76.075	ENSTSYG00000010732	POC1B	97	76.075	Carlito_syrichta
MGP_PahariEiJ_G0031323	Poc1b	100	66.207	ENSCAPG00000015652	POC1B	100	66.207	Cavia_aperea
MGP_PahariEiJ_G0031323	Poc1b	100	78.211	ENSCPOG00000015525	POC1B	97	78.211	Cavia_porcellus
MGP_PahariEiJ_G0031323	Poc1b	100	81.651	ENSCATG00000036201	POC1B	100	81.651	Cercocebus_atys
MGP_PahariEiJ_G0031323	Poc1b	100	80.505	ENSCLAG00000006831	POC1B	100	80.576	Chinchilla_lanigera
MGP_PahariEiJ_G0031323	Poc1b	100	81.596	ENSCSAG00000003775	POC1B	100	81.596	Chlorocebus_sabaeus
MGP_PahariEiJ_G0031323	Poc1b	99	58.333	ENSCPBG00000000137	POC1B	99	58.691	Chrysemys_picta_bellii
MGP_PahariEiJ_G0031323	Poc1b	100	81.422	ENSCANG00000043354	POC1B	100	81.422	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0031323	Poc1b	100	80.505	ENSDNOG00000011916	POC1B	100	80.505	Dasypus_novemcinctus
MGP_PahariEiJ_G0031323	Poc1b	100	82.339	ENSDORG00000013903	Poc1b	100	81.375	Dipodomys_ordii
MGP_PahariEiJ_G0031323	Poc1b	100	81.422	ENSEASG00005019319	POC1B	97	81.422	Equus_asinus_asinus
MGP_PahariEiJ_G0031323	Poc1b	100	81.193	ENSECAG00000013326	POC1B	100	80.931	Equus_caballus
MGP_PahariEiJ_G0031323	Poc1b	100	80.734	ENSFCAG00000007623	POC1B	100	80.734	Felis_catus
MGP_PahariEiJ_G0031323	Poc1b	98	51.168	ENSFALG00000010636	POC1B	93	49.787	Ficedula_albicollis
MGP_PahariEiJ_G0031323	Poc1b	100	81.881	ENSFDAG00000020160	POC1B	100	82.254	Fukomys_damarensis
MGP_PahariEiJ_G0031323	Poc1b	77	65.797	ENSGAGG00000013124	POC1B	96	65.797	Gopherus_agassizii
MGP_PahariEiJ_G0031323	Poc1b	100	81.651	ENSGGOG00000008572	POC1B	100	81.651	Gorilla_gorilla
MGP_PahariEiJ_G0031323	Poc1b	100	81.651	ENSHGLG00000014556	POC1B	100	81.651	Heterocephalus_glaber_female
MGP_PahariEiJ_G0031323	Poc1b	100	81.651	ENSHGLG00100000295	POC1B	100	82.014	Heterocephalus_glaber_male
MGP_PahariEiJ_G0031323	Poc1b	100	81.422	ENSSTOG00000006306	POC1B	100	80.942	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0031323	Poc1b	100	81.596	ENSJJAG00000013503	Poc1b	100	81.596	Jaculus_jaculus
MGP_PahariEiJ_G0031323	Poc1b	98	54.927	ENSLOCG00000016379	POC1B	97	54.244	Lepisosteus_oculatus
MGP_PahariEiJ_G0031323	Poc1b	100	81.149	ENSLAFG00000017550	POC1B	98	81.149	Loxodonta_africana
MGP_PahariEiJ_G0031323	Poc1b	100	81.651	ENSMFAG00000043490	POC1B	100	81.651	Macaca_fascicularis
MGP_PahariEiJ_G0031323	Poc1b	100	81.651	ENSMNEG00000040128	POC1B	100	81.651	Macaca_nemestrina
MGP_PahariEiJ_G0031323	Poc1b	100	81.651	ENSMLEG00000031700	POC1B	100	81.651	Mandrillus_leucophaeus
MGP_PahariEiJ_G0031323	Poc1b	100	86.897	ENSMOCG00000015822	Poc1b	100	86.897	Microtus_ochrogaster
MGP_PahariEiJ_G0031323	Poc1b	99	67.097	ENSMODG00000009882	POC1B	99	64.694	Monodelphis_domestica
MGP_PahariEiJ_G0031323	Poc1b	100	81.465	ENSMPUG00000007581	POC1B	97	81.693	Mustela_putorius_furo
MGP_PahariEiJ_G0031323	Poc1b	99	78.851	ENSMLUG00000002893	POC1B	99	78.851	Myotis_lucifugus
MGP_PahariEiJ_G0031323	Poc1b	100	82.759	ENSNGAG00000019321	Poc1b	100	81.556	Nannospalax_galili
MGP_PahariEiJ_G0031323	Poc1b	100	81.651	ENSNLEG00000034847	POC1B	100	81.651	Nomascus_leucogenys
MGP_PahariEiJ_G0031323	Poc1b	99	79.215	ENSODEG00000009236	POC1B	98	79.215	Octodon_degus
MGP_PahariEiJ_G0031323	Poc1b	99	63.972	ENSOANG00000006637	POC1B	99	63.972	Ornithorhynchus_anatinus
MGP_PahariEiJ_G0031323	Poc1b	100	81.839	ENSOCUG00000008219	POC1B	97	81.839	Oryctolagus_cuniculus
MGP_PahariEiJ_G0031323	Poc1b	99	81.609	ENSOARG00000015648	POC1B	97	81.609	Ovis_aries
MGP_PahariEiJ_G0031323	Poc1b	100	81.881	ENSPPAG00000030897	POC1B	100	81.881	Pan_paniscus
MGP_PahariEiJ_G0031323	Poc1b	100	80.505	ENSPPRG00000006168	POC1B	100	80.505	Panthera_pardus
MGP_PahariEiJ_G0031323	Poc1b	100	80.505	ENSPTIG00000019536	POC1B	100	80.505	Panthera_tigris_altaica
MGP_PahariEiJ_G0031323	Poc1b	100	81.881	ENSPTRG00000005284	POC1B	100	81.881	Pan_troglodytes
MGP_PahariEiJ_G0031323	Poc1b	100	81.422	ENSPANG00000015875	POC1B	100	81.422	Papio_anubis
MGP_PahariEiJ_G0031323	Poc1b	99	59.122	ENSPSIG00000004298	POC1B	99	59.002	Pelodiscus_sinensis
MGP_PahariEiJ_G0031323	Poc1b	63	84.146	ENSPCIG00000014731	-	84	84.146	Phascolarctos_cinereus
MGP_PahariEiJ_G0031323	Poc1b	100	82.569	ENSPPYG00000004819	POC1B	100	82.569	Pongo_abelii
MGP_PahariEiJ_G0031323	Poc1b	97	61.882	ENSPCAG00000002158	POC1B	97	61.882	Procavia_capensis
MGP_PahariEiJ_G0031323	Poc1b	100	80.690	ENSPVAG00000011562	POC1B	97	80.690	Pteropus_vampyrus
MGP_PahariEiJ_G0031323	Poc1b	99	53.249	ENSPNAG00000026557	POC1B	97	53.249	Pygocentrus_nattereri
MGP_PahariEiJ_G0031323	Poc1b	100	80.889	ENSRBIG00000001080	POC1B	100	80.889	Rhinopithecus_bieti
MGP_PahariEiJ_G0031323	Poc1b	100	81.609	ENSRROG00000044376	POC1B	100	81.609	Rhinopithecus_roxellana
MGP_PahariEiJ_G0031323	Poc1b	100	81.651	ENSSBOG00000023395	POC1B	100	81.651	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0031323	Poc1b	100	68.828	ENSSARG00000010807	POC1B	100	68.828	Sorex_araneus
MGP_PahariEiJ_G0031323	Poc1b	100	80.505	ENSSSCG00000000920	POC1B	100	80.488	Sus_scrofa
MGP_PahariEiJ_G0031323	Poc1b	99	50.917	ENSTGUG00000008063	POC1B	99	51.515	Taeniopygia_guttata
MGP_PahariEiJ_G0031323	Poc1b	98	76.291	ENSTBEG00000014216	POC1B	100	76.291	Tupaia_belangeri
MGP_PahariEiJ_G0031323	Poc1b	100	80.963	ENSTTRG00000002513	POC1B	97	80.963	Tursiops_truncatus
MGP_PahariEiJ_G0031323	Poc1b	100	81.693	ENSUAMG00000006889	POC1B	97	81.922	Ursus_americanus
MGP_PahariEiJ_G0031323	Poc1b	100	81.693	ENSUMAG00000002434	POC1B	100	81.922	Ursus_maritimus
MGP_PahariEiJ_G0031323	Poc1b	83	87.500	ENSVPAG00000001441	POC1B	79	87.500	Vicugna_pacos
MGP_PahariEiJ_G0031323	Poc1b	71	83.505	ENSVVUG00000011627	-	96	83.505	Vulpes_vulpes
MGP_PahariEiJ_G0031323	Poc1b	98	55.452	ENSXETG00000021865	poc1b	93	62.422	Xenopus_tropicalis