EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0031396 (Gene tree)
Gene ID: 110326155
Gene Symbol: Rtcb
Alias: D10Wsu52e|HSPC117
Full Name: RNA 2'%2C3'-cyclic phosphate and 5'-OH ligase
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Plus strand
Length: 21460 bases
Position: chr9:89297012-89318471
Accession: 110326155
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0088323	RtcB	PF01139.17	2.1e-145	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0088324	-	980	-	-	- (aa)	-	-
MGP_PahariEiJ_T0088323	-	2015	XM_021204310	MGP_PahariEiJ_P0088323	505 (aa)	XP_021059969	UPI0000020BC0

Gene Model

Click here to download MGP_PahariEiJ_G0031396's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0031396's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0031396	Rtcb	100	99.406	ENSG00000100220	RTCB	100	99.406	Homo_sapiens
MGP_PahariEiJ_G0031396	Rtcb	100	94.653	ENSAPOG00000006040	rtcb	100	94.653	Acanthochromis_polyacanthus
MGP_PahariEiJ_G0031396	Rtcb	100	99.208	ENSAMEG00000016152	RTCB	100	99.208	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0031396	Rtcb	100	90.297	ENSACIG00000009083	rtcb	100	90.297	Amphilophus_citrinellus
MGP_PahariEiJ_G0031396	Rtcb	100	94.851	ENSAOCG00000005662	rtcb	100	95.435	Amphiprion_ocellaris
MGP_PahariEiJ_G0031396	Rtcb	96	89.733	ENSAPEG00000024653	rtcb	100	89.733	Amphiprion_percula
MGP_PahariEiJ_G0031396	Rtcb	100	94.851	ENSAPEG00000024701	rtcb	100	94.851	Amphiprion_percula
MGP_PahariEiJ_G0031396	Rtcb	100	94.851	ENSATEG00000000618	rtcb	100	94.851	Anabas_testudineus
MGP_PahariEiJ_G0031396	Rtcb	100	93.642	ENSACAG00000014817	RTCB	100	93.642	Anolis_carolinensis
MGP_PahariEiJ_G0031396	Rtcb	100	83.762	ENSANAG00000018191	-	91	83.762	Aotus_nancymaae
MGP_PahariEiJ_G0031396	Rtcb	100	63.241	ENSANAG00000023724	-	100	63.241	Aotus_nancymaae
MGP_PahariEiJ_G0031396	Rtcb	100	93.267	ENSACLG00000008367	rtcb	100	94.130	Astatotilapia_calliptera
MGP_PahariEiJ_G0031396	Rtcb	100	94.455	ENSAMXG00000042320	rtcb	100	94.455	Astyanax_mexicanus
MGP_PahariEiJ_G0031396	Rtcb	100	99.010	ENSBTAG00000011070	RTCB	100	99.010	Bos_taurus
MGP_PahariEiJ_G0031396	Rtcb	100	73.267	WBGene00008877	rtcb-1	100	73.267	Caenorhabditis_elegans
MGP_PahariEiJ_G0031396	Rtcb	100	99.802	ENSCJAG00000006128	RTCB	100	99.802	Callithrix_jacchus
MGP_PahariEiJ_G0031396	Rtcb	100	99.208	ENSCAFG00000001785	RTCB	100	99.208	Canis_familiaris
MGP_PahariEiJ_G0031396	Rtcb	100	94.851	ENSCAFG00000010789	-	100	94.851	Canis_familiaris
MGP_PahariEiJ_G0031396	Rtcb	87	95.455	ENSCAFG00020018953	-	99	95.455	Canis_lupus_dingo
MGP_PahariEiJ_G0031396	Rtcb	100	99.208	ENSCAFG00020004890	-	100	99.208	Canis_lupus_dingo
MGP_PahariEiJ_G0031396	Rtcb	100	99.208	ENSCHIG00000027009	-	100	99.208	Capra_hircus
MGP_PahariEiJ_G0031396	Rtcb	100	99.406	ENSTSYG00000012320	RTCB	100	99.406	Carlito_syrichta
MGP_PahariEiJ_G0031396	Rtcb	94	98.952	ENSCAPG00000011647	RTCB	96	98.952	Cavia_aperea
MGP_PahariEiJ_G0031396	Rtcb	100	99.802	ENSCCAG00000000618	RTCB	100	99.802	Cebus_capucinus
MGP_PahariEiJ_G0031396	Rtcb	100	99.010	ENSCATG00000033424	RTCB	100	99.010	Cercocebus_atys
MGP_PahariEiJ_G0031396	Rtcb	100	98.812	ENSCLAG00000007997	RTCB	100	98.812	Chinchilla_lanigera
MGP_PahariEiJ_G0031396	Rtcb	100	99.208	ENSCSAG00000008351	RTCB	100	99.208	Chlorocebus_sabaeus
MGP_PahariEiJ_G0031396	Rtcb	100	84.950	ENSCHOG00000009123	RTCB	100	84.950	Choloepus_hoffmanni
MGP_PahariEiJ_G0031396	Rtcb	100	96.634	ENSCPBG00000023184	RTCB	100	96.634	Chrysemys_picta_bellii
MGP_PahariEiJ_G0031396	Rtcb	100	81.584	ENSCING00000003830	-	100	81.584	Ciona_intestinalis
MGP_PahariEiJ_G0031396	Rtcb	100	81.980	ENSCSAVG00000008124	-	99	81.980	Ciona_savignyi
MGP_PahariEiJ_G0031396	Rtcb	100	95.248	ENSCANG00000001891	RTCB	100	95.248	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0031396	Rtcb	100	99.604	ENSCGRG00001011173	Rtcb	100	99.604	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0031396	Rtcb	93	99.788	ENSCGRG00000009587	-	96	99.788	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0031396	Rtcb	100	93.861	ENSCSEG00000003986	rtcb	100	93.861	Cynoglossus_semilaevis
MGP_PahariEiJ_G0031396	Rtcb	82	93.269	ENSCVAG00000000569	rtcb	95	93.269	Cyprinodon_variegatus
MGP_PahariEiJ_G0031396	Rtcb	100	94.059	ENSDARG00000101047	rtcb	100	94.059	Danio_rerio
MGP_PahariEiJ_G0031396	Rtcb	80	96.560	ENSDNOG00000012425	RTCB	99	96.560	Dasypus_novemcinctus
MGP_PahariEiJ_G0031396	Rtcb	100	98.812	ENSDORG00000010855	Rtcb	100	98.812	Dipodomys_ordii
MGP_PahariEiJ_G0031396	Rtcb	99	85.288	FBgn0032781	RtcB	99	85.288	Drosophila_melanogaster
MGP_PahariEiJ_G0031396	Rtcb	100	92.475	ENSETEG00000001988	RTCB	100	92.475	Echinops_telfairi
MGP_PahariEiJ_G0031396	Rtcb	100	85.347	ENSEBUG00000014235	rtcb	100	85.347	Eptatretus_burgeri
MGP_PahariEiJ_G0031396	Rtcb	100	99.604	ENSEASG00005019059	RTCB	100	99.604	Equus_asinus_asinus
MGP_PahariEiJ_G0031396	Rtcb	100	99.604	ENSECAG00000023998	RTCB	100	99.604	Equus_caballus
MGP_PahariEiJ_G0031396	Rtcb	89	89.933	ENSEEUG00000006251	RTCB	100	89.933	Erinaceus_europaeus
MGP_PahariEiJ_G0031396	Rtcb	100	82.798	ENSELUG00000009275	rtcb	100	82.798	Esox_lucius
MGP_PahariEiJ_G0031396	Rtcb	100	99.406	ENSFCAG00000026480	RTCB	100	99.406	Felis_catus
MGP_PahariEiJ_G0031396	Rtcb	100	97.624	ENSFALG00000013334	RTCB	100	97.624	Ficedula_albicollis
MGP_PahariEiJ_G0031396	Rtcb	100	99.208	ENSFDAG00000018150	RTCB	100	99.208	Fukomys_damarensis
MGP_PahariEiJ_G0031396	Rtcb	100	94.059	ENSFHEG00000009595	rtcb	100	94.059	Fundulus_heteroclitus
MGP_PahariEiJ_G0031396	Rtcb	100	91.485	ENSGMOG00000018882	rtcb	100	91.485	Gadus_morhua
MGP_PahariEiJ_G0031396	Rtcb	100	97.426	ENSGALG00000012611	RTCB	100	97.426	Gallus_gallus
MGP_PahariEiJ_G0031396	Rtcb	100	94.455	ENSGAFG00000004198	rtcb	100	94.455	Gambusia_affinis
MGP_PahariEiJ_G0031396	Rtcb	100	93.861	ENSGACG00000000586	rtcb	100	93.861	Gasterosteus_aculeatus
MGP_PahariEiJ_G0031396	Rtcb	93	95.957	ENSGAGG00000019133	RTCB	98	95.957	Gopherus_agassizii
MGP_PahariEiJ_G0031396	Rtcb	100	99.406	ENSGGOG00000011402	RTCB	100	99.406	Gorilla_gorilla
MGP_PahariEiJ_G0031396	Rtcb	100	93.267	ENSHBUG00000020571	rtcb	100	93.267	Haplochromis_burtoni
MGP_PahariEiJ_G0031396	Rtcb	93	70.551	ENSHGLG00000001066	-	99	70.551	Heterocephalus_glaber_female
MGP_PahariEiJ_G0031396	Rtcb	100	99.208	ENSHGLG00000004492	RTCB	100	99.208	Heterocephalus_glaber_female
MGP_PahariEiJ_G0031396	Rtcb	100	99.208	ENSHGLG00100008965	RTCB	100	99.208	Heterocephalus_glaber_male
MGP_PahariEiJ_G0031396	Rtcb	100	91.913	ENSHCOG00000006450	rtcb	100	91.913	Hippocampus_comes
MGP_PahariEiJ_G0031396	Rtcb	100	94.653	ENSIPUG00000015443	rtcb	100	94.653	Ictalurus_punctatus
MGP_PahariEiJ_G0031396	Rtcb	100	99.208	ENSSTOG00000003878	RTCB	100	99.208	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0031396	Rtcb	100	99.208	ENSJJAG00000010667	Rtcb	100	99.208	Jaculus_jaculus
MGP_PahariEiJ_G0031396	Rtcb	100	94.059	ENSKMAG00000013178	rtcb	100	94.059	Kryptolebias_marmoratus
MGP_PahariEiJ_G0031396	Rtcb	100	93.267	ENSLBEG00000000214	rtcb	100	93.267	Labrus_bergylta
MGP_PahariEiJ_G0031396	Rtcb	100	94.257	ENSLBEG00000010566	RTCB	100	94.257	Labrus_bergylta
MGP_PahariEiJ_G0031396	Rtcb	100	95.446	ENSLACG00000013033	RTCB	100	95.446	Latimeria_chalumnae
MGP_PahariEiJ_G0031396	Rtcb	100	94.653	ENSLOCG00000016515	rtcb	99	94.653	Lepisosteus_oculatus
MGP_PahariEiJ_G0031396	Rtcb	100	99.010	ENSLAFG00000002082	RTCB	100	99.010	Loxodonta_africana
MGP_PahariEiJ_G0031396	Rtcb	100	99.208	ENSMFAG00000034419	RTCB	100	99.208	Macaca_fascicularis
MGP_PahariEiJ_G0031396	Rtcb	100	99.208	ENSMMUG00000006720	RTCB	100	99.208	Macaca_mulatta
MGP_PahariEiJ_G0031396	Rtcb	100	99.208	ENSMNEG00000040669	RTCB	100	99.208	Macaca_nemestrina
MGP_PahariEiJ_G0031396	Rtcb	100	99.010	ENSMLEG00000040505	RTCB	100	99.010	Mandrillus_leucophaeus
MGP_PahariEiJ_G0031396	Rtcb	100	94.455	ENSMAMG00000020676	rtcb	100	94.455	Mastacembelus_armatus
MGP_PahariEiJ_G0031396	Rtcb	100	93.267	ENSMZEG00005018942	rtcb	100	93.267	Maylandia_zebra
MGP_PahariEiJ_G0031396	Rtcb	100	97.041	ENSMGAG00000012805	RTCB	100	97.041	Meleagris_gallopavo
MGP_PahariEiJ_G0031396	Rtcb	60	100.000	ENSMAUG00000008301	Rtcb	100	100.000	Mesocricetus_auratus
MGP_PahariEiJ_G0031396	Rtcb	100	99.604	ENSMICG00000013303	-	100	99.604	Microcebus_murinus
MGP_PahariEiJ_G0031396	Rtcb	100	79.802	ENSMICG00000036677	-	100	79.802	Microcebus_murinus
MGP_PahariEiJ_G0031396	Rtcb	100	99.604	ENSMOCG00000002440	Rtcb	100	99.604	Microtus_ochrogaster
MGP_PahariEiJ_G0031396	Rtcb	100	94.851	ENSMMOG00000005987	rtcb	100	94.851	Mola_mola
MGP_PahariEiJ_G0031396	Rtcb	100	98.218	ENSMODG00000001414	RTCB	100	98.218	Monodelphis_domestica
MGP_PahariEiJ_G0031396	Rtcb	100	94.653	ENSMALG00000007603	rtcb	100	94.653	Monopterus_albus
MGP_PahariEiJ_G0031396	Rtcb	100	100.000	MGP_CAROLIEiJ_G0015689	Rtcb	100	100.000	Mus_caroli
MGP_PahariEiJ_G0031396	Rtcb	100	100.000	ENSMUSG00000001783	Rtcb	100	100.000	Mus_musculus
MGP_PahariEiJ_G0031396	Rtcb	100	100.000	MGP_SPRETEiJ_G0016507	Rtcb	100	100.000	Mus_spretus
MGP_PahariEiJ_G0031396	Rtcb	100	99.208	ENSMPUG00000012285	RTCB	100	99.208	Mustela_putorius_furo
MGP_PahariEiJ_G0031396	Rtcb	100	96.844	ENSMLUG00000007803	RTCB	100	96.844	Myotis_lucifugus
MGP_PahariEiJ_G0031396	Rtcb	75	100.000	ENSNGAG00000005093	Rtcb	100	100.000	Nannospalax_galili
MGP_PahariEiJ_G0031396	Rtcb	100	93.465	ENSNBRG00000017202	rtcb	100	93.465	Neolamprologus_brichardi
MGP_PahariEiJ_G0031396	Rtcb	100	99.406	ENSNLEG00000004960	RTCB	100	99.406	Nomascus_leucogenys
MGP_PahariEiJ_G0031396	Rtcb	100	72.871	ENSMEUG00000007809	-	100	72.871	Notamacropus_eugenii
MGP_PahariEiJ_G0031396	Rtcb	73	100.000	ENSOPRG00000003488	RTCB	79	100.000	Ochotona_princeps
MGP_PahariEiJ_G0031396	Rtcb	82	100.000	ENSODEG00000013033	-	100	100.000	Octodon_degus
MGP_PahariEiJ_G0031396	Rtcb	100	65.149	ENSODEG00000005042	-	100	65.149	Octodon_degus
MGP_PahariEiJ_G0031396	Rtcb	100	94.455	ENSONIG00000007474	rtcb	100	94.455	Oreochromis_niloticus
MGP_PahariEiJ_G0031396	Rtcb	100	98.218	ENSOANG00000005524	RTCB	100	98.218	Ornithorhynchus_anatinus
MGP_PahariEiJ_G0031396	Rtcb	93	99.362	ENSOCUG00000008270	RTCB	96	99.362	Oryctolagus_cuniculus
MGP_PahariEiJ_G0031396	Rtcb	100	93.465	ENSORLG00000020093	rtcb	100	93.465	Oryzias_latipes
MGP_PahariEiJ_G0031396	Rtcb	100	93.465	ENSORLG00020003706	rtcb	100	93.465	Oryzias_latipes_hni
MGP_PahariEiJ_G0031396	Rtcb	100	93.663	ENSORLG00015002968	rtcb	100	93.663	Oryzias_latipes_hsok
MGP_PahariEiJ_G0031396	Rtcb	100	93.267	ENSOMEG00000021278	rtcb	100	93.267	Oryzias_melastigma
MGP_PahariEiJ_G0031396	Rtcb	100	99.010	ENSOGAG00000001425	RTCB	100	99.010	Otolemur_garnettii
MGP_PahariEiJ_G0031396	Rtcb	100	99.208	ENSOARG00000018008	RTCB	100	99.208	Ovis_aries
MGP_PahariEiJ_G0031396	Rtcb	100	99.406	ENSPPAG00000028667	RTCB	100	99.406	Pan_paniscus
MGP_PahariEiJ_G0031396	Rtcb	100	99.406	ENSPPRG00000004038	RTCB	100	99.406	Panthera_pardus
MGP_PahariEiJ_G0031396	Rtcb	94	96.211	ENSPTIG00000020499	RTCB	97	96.211	Panthera_tigris_altaica
MGP_PahariEiJ_G0031396	Rtcb	100	99.406	ENSPTRG00000014287	RTCB	100	99.406	Pan_troglodytes
MGP_PahariEiJ_G0031396	Rtcb	100	99.208	ENSPANG00000016035	RTCB	100	99.208	Papio_anubis
MGP_PahariEiJ_G0031396	Rtcb	100	93.069	ENSPKIG00000001881	rtcb	100	93.069	Paramormyrops_kingsleyae
MGP_PahariEiJ_G0031396	Rtcb	91	98.043	ENSPSIG00000011690	RTCB	100	98.043	Pelodiscus_sinensis
MGP_PahariEiJ_G0031396	Rtcb	100	94.653	ENSPMGG00000016672	rtcb	100	94.653	Periophthalmus_magnuspinnatus
MGP_PahariEiJ_G0031396	Rtcb	100	100.000	ENSPEMG00000019548	Rtcb	100	100.000	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0031396	Rtcb	100	91.287	ENSPMAG00000005657	rtcb	100	91.287	Petromyzon_marinus
MGP_PahariEiJ_G0031396	Rtcb	100	98.614	ENSPCIG00000009467	RTCB	100	98.614	Phascolarctos_cinereus
MGP_PahariEiJ_G0031396	Rtcb	100	94.851	ENSPFOG00000003058	rtcb	100	94.851	Poecilia_formosa
MGP_PahariEiJ_G0031396	Rtcb	100	94.653	ENSPLAG00000017663	rtcb	100	94.653	Poecilia_latipinna
MGP_PahariEiJ_G0031396	Rtcb	100	94.851	ENSPMEG00000006227	rtcb	100	94.851	Poecilia_mexicana
MGP_PahariEiJ_G0031396	Rtcb	100	94.653	ENSPREG00000018467	rtcb	100	94.653	Poecilia_reticulata
MGP_PahariEiJ_G0031396	Rtcb	100	99.406	ENSPPYG00000011752	RTCB	100	99.406	Pongo_abelii
MGP_PahariEiJ_G0031396	Rtcb	93	81.780	ENSPCAG00000013641	RTCB	100	81.780	Procavia_capensis
MGP_PahariEiJ_G0031396	Rtcb	100	99.406	ENSPCOG00000017243	RTCB	100	99.406	Propithecus_coquereli
MGP_PahariEiJ_G0031396	Rtcb	93	98.723	ENSPVAG00000002380	RTCB	100	98.723	Pteropus_vampyrus
MGP_PahariEiJ_G0031396	Rtcb	100	93.267	ENSPNYG00000022760	rtcb	100	93.267	Pundamilia_nyererei
MGP_PahariEiJ_G0031396	Rtcb	100	95.248	ENSPNAG00000009209	rtcb	100	95.248	Pygocentrus_nattereri
MGP_PahariEiJ_G0031396	Rtcb	100	100.000	ENSRNOG00000004813	Rtcb	100	100.000	Rattus_norvegicus
MGP_PahariEiJ_G0031396	Rtcb	100	90.119	ENSRBIG00000042090	RTCB	100	90.119	Rhinopithecus_bieti
MGP_PahariEiJ_G0031396	Rtcb	100	94.851	ENSSBOG00000020085	-	100	94.851	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0031396	Rtcb	94	99.367	ENSSHAG00000016277	RTCB	100	99.367	Sarcophilus_harrisii
MGP_PahariEiJ_G0031396	Rtcb	100	93.267	ENSSFOG00015000763	rtcb	100	93.267	Scleropages_formosus
MGP_PahariEiJ_G0031396	Rtcb	100	93.861	ENSSFOG00015011572	RTCB	100	93.861	Scleropages_formosus
MGP_PahariEiJ_G0031396	Rtcb	100	90.693	ENSSMAG00000005096	rtcb	100	90.693	Scophthalmus_maximus
MGP_PahariEiJ_G0031396	Rtcb	100	93.861	ENSSDUG00000012605	rtcb	100	93.861	Seriola_dumerili
MGP_PahariEiJ_G0031396	Rtcb	100	93.861	ENSSLDG00000019458	rtcb	100	93.861	Seriola_lalandi_dorsalis
MGP_PahariEiJ_G0031396	Rtcb	66	100.000	ENSSARG00000004799	-	70	100.000	Sorex_araneus
MGP_PahariEiJ_G0031396	Rtcb	100	95.644	ENSSPUG00000012814	RTCB	100	95.644	Sphenodon_punctatus
MGP_PahariEiJ_G0031396	Rtcb	100	94.851	ENSSPAG00000004623	rtcb	100	94.851	Stegastes_partitus
MGP_PahariEiJ_G0031396	Rtcb	100	99.406	ENSSSCG00000000158	RTCB	100	99.406	Sus_scrofa
MGP_PahariEiJ_G0031396	Rtcb	100	97.624	ENSTGUG00000010947	RTCB	99	97.624	Taeniopygia_guttata
MGP_PahariEiJ_G0031396	Rtcb	91	95.435	ENSTRUG00000009880	rtcb	100	95.435	Takifugu_rubripes
MGP_PahariEiJ_G0031396	Rtcb	100	93.465	ENSTNIG00000002484	rtcb	100	93.465	Tetraodon_nigroviridis
MGP_PahariEiJ_G0031396	Rtcb	100	85.941	ENSTBEG00000004418	RTCB	100	85.941	Tupaia_belangeri
MGP_PahariEiJ_G0031396	Rtcb	93	98.298	ENSTTRG00000006417	RTCB	100	98.298	Tursiops_truncatus
MGP_PahariEiJ_G0031396	Rtcb	100	99.208	ENSUAMG00000022792	RTCB	100	99.208	Ursus_americanus
MGP_PahariEiJ_G0031396	Rtcb	100	99.208	ENSUMAG00000017225	RTCB	100	99.208	Ursus_maritimus
MGP_PahariEiJ_G0031396	Rtcb	100	99.208	ENSVPAG00000005375	RTCB	100	99.208	Vicugna_pacos
MGP_PahariEiJ_G0031396	Rtcb	100	99.208	ENSVVUG00000023408	RTCB	100	99.509	Vulpes_vulpes
MGP_PahariEiJ_G0031396	Rtcb	100	94.653	ENSXETG00000011523	rtcb	100	94.653	Xenopus_tropicalis
MGP_PahariEiJ_G0031396	Rtcb	100	94.851	ENSXMAG00000002855	rtcb	100	94.851	Xiphophorus_maculatus