EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0031540 (Gene tree)
Gene ID: 110313769
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Minus strand
Length: 76828 bases
Position: chrX:28780965-28857792
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0088858	MMR_HSR1	PF01926.23	0.00013	1	1
MGP_PahariEiJ_P0088857	MMR_HSR1	PF01926.23	0.00013	1	1
MGP_PahariEiJ_P0088859	MMR_HSR1	PF01926.23	0.00014	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0088857	-	3292	-	MGP_PahariEiJ_P0088857	372 (aa)	-	-
MGP_PahariEiJ_T0088860	-	520	-	MGP_PahariEiJ_P0088860	141 (aa)	-	-
MGP_PahariEiJ_T0088861	-	3392	-	-	- (aa)	-	-
MGP_PahariEiJ_T0088858	-	4511	-	MGP_PahariEiJ_P0088858	370 (aa)	-	-
MGP_PahariEiJ_T0088859	-	1675	-	MGP_PahariEiJ_P0088859	377 (aa)	-	-

Gene Model

Click here to download MGP_PahariEiJ_G0031540's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0031540's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PahariEiJ_G0031540	-	66	42.126	MGP_PahariEiJ_G0027693	-	100	41.284
MGP_PahariEiJ_G0031540	-	71	78.491	MGP_PahariEiJ_G0017474	Sept8	62	78.491
MGP_PahariEiJ_G0031540	-	65	42.063	MGP_PahariEiJ_G0018060	Sept4	89	43.541
MGP_PahariEiJ_G0031540	-	66	37.008	MGP_PahariEiJ_G0016124	Sept12	80	37.308
MGP_PahariEiJ_G0031540	-	71	80.608	MGP_PahariEiJ_G0017202	Sept11	62	80.608
MGP_PahariEiJ_G0031540	-	66	40.784	MGP_PahariEiJ_G0013702	Sept1	100	38.776
MGP_PahariEiJ_G0031540	-	71	71.483	MGP_PahariEiJ_G0030756	Sept10	61	71.483
MGP_PahariEiJ_G0031540	-	65	41.434	MGP_PahariEiJ_G0016256	-	67	41.434
MGP_PahariEiJ_G0031540	-	66	42.629	MGP_PahariEiJ_G0014782	Sept7	55	42.629
MGP_PahariEiJ_G0031540	-	66	40.711	MGP_PahariEiJ_G0020080	Sept3	75	40.711

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0031540	-	71	95.817	ENSG00000125354	SEPT6	99	94.737	Homo_sapiens
MGP_PahariEiJ_G0031540	-	71	88.973	ENSAPOG00000000347	sept6	66	89.804	Acanthochromis_polyacanthus
MGP_PahariEiJ_G0031540	-	71	88.593	ENSACIG00000013682	sept6	62	88.593	Amphilophus_citrinellus
MGP_PahariEiJ_G0031540	-	71	88.973	ENSAOCG00000011293	sept6	62	88.973	Amphiprion_ocellaris
MGP_PahariEiJ_G0031540	-	71	88.973	ENSAPEG00000005460	sept6	62	88.973	Amphiprion_percula
MGP_PahariEiJ_G0031540	-	71	88.593	ENSATEG00000018814	sept6	62	88.593	Anabas_testudineus
MGP_PahariEiJ_G0031540	-	71	96.578	ENSANAG00000033580	SEPT6	62	96.578	Aotus_nancymaae
MGP_PahariEiJ_G0031540	-	71	88.593	ENSACLG00000001734	sept6	62	88.593	Astatotilapia_calliptera
MGP_PahariEiJ_G0031540	-	71	87.833	ENSAMXG00000033660	sept6	62	87.833	Astyanax_mexicanus
MGP_PahariEiJ_G0031540	-	71	96.578	ENSCJAG00000005022	SEPT6	62	96.578	Callithrix_jacchus
MGP_PahariEiJ_G0031540	-	64	95.397	ENSCCAG00000023266	SEPT6	60	95.397	Cebus_capucinus
MGP_PahariEiJ_G0031540	-	71	95.817	ENSCATG00000036060	SEPT6	65	95.817	Cercocebus_atys
MGP_PahariEiJ_G0031540	-	71	95.817	ENSCSAG00000018351	SEPT6	62	95.817	Chlorocebus_sabaeus
MGP_PahariEiJ_G0031540	-	71	95.817	ENSCANG00000016430	SEPT6	62	95.817	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0031540	-	71	98.099	ENSCGRG00001014207	Sept6	62	98.099	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0031540	-	70	96.899	ENSCGRG00000007825	Sept6	61	98.024	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0031540	-	71	87.452	ENSCSEG00000002026	sept6	58	87.452	Cynoglossus_semilaevis
MGP_PahariEiJ_G0031540	-	71	88.593	ENSCVAG00000004959	sept6	62	88.593	Cyprinodon_variegatus
MGP_PahariEiJ_G0031540	-	71	89.354	ENSDARG00000010721	sept6	61	89.354	Danio_rerio
MGP_PahariEiJ_G0031540	-	71	88.593	ENSELUG00000020499	sept6	59	88.593	Esox_lucius
MGP_PahariEiJ_G0031540	-	71	96.198	ENSFCAG00000008744	SEPT6	62	96.198	Felis_catus
MGP_PahariEiJ_G0031540	-	71	94.677	ENSFDAG00000002473	SEPT6	62	94.677	Fukomys_damarensis
MGP_PahariEiJ_G0031540	-	71	88.213	ENSFHEG00000017987	sept6	62	88.213	Fundulus_heteroclitus
MGP_PahariEiJ_G0031540	-	71	88.593	ENSGMOG00000001671	sept6	61	88.593	Gadus_morhua
MGP_PahariEiJ_G0031540	-	71	88.213	ENSGAFG00000000922	sept6	62	88.213	Gambusia_affinis
MGP_PahariEiJ_G0031540	-	71	88.593	ENSGACG00000017441	sept6	61	88.593	Gasterosteus_aculeatus
MGP_PahariEiJ_G0031540	-	71	95.817	ENSGGOG00000009733	SEPT6	62	95.817	Gorilla_gorilla
MGP_PahariEiJ_G0031540	-	71	88.593	ENSHBUG00000017506	sept6	62	88.593	Haplochromis_burtoni
MGP_PahariEiJ_G0031540	-	71	88.593	ENSHCOG00000017047	sept6	62	88.593	Hippocampus_comes
MGP_PahariEiJ_G0031540	-	71	88.973	ENSIPUG00000019317	sept6	52	88.973	Ictalurus_punctatus
MGP_PahariEiJ_G0031540	-	71	98.099	ENSJJAG00000020412	Sept6	62	98.099	Jaculus_jaculus
MGP_PahariEiJ_G0031540	-	71	88.593	ENSKMAG00000020207	sept6	62	88.593	Kryptolebias_marmoratus
MGP_PahariEiJ_G0031540	-	71	88.973	ENSLBEG00000028683	sept6	59	88.973	Labrus_bergylta
MGP_PahariEiJ_G0031540	-	71	88.973	ENSLOCG00000015233	sept6	59	91.102	Lepisosteus_oculatus
MGP_PahariEiJ_G0031540	-	71	95.817	ENSMFAG00000003084	SEPT6	62	95.817	Macaca_fascicularis
MGP_PahariEiJ_G0031540	-	71	95.817	ENSMMUG00000017669	SEPT6	62	95.817	Macaca_mulatta
MGP_PahariEiJ_G0031540	-	71	95.817	ENSMNEG00000026932	SEPT6	62	95.817	Macaca_nemestrina
MGP_PahariEiJ_G0031540	-	71	95.817	ENSMLEG00000030428	SEPT6	62	95.817	Mandrillus_leucophaeus
MGP_PahariEiJ_G0031540	-	71	89.354	ENSMAMG00000019988	sept6	62	89.354	Mastacembelus_armatus
MGP_PahariEiJ_G0031540	-	71	88.593	ENSMZEG00005007935	sept6	55	88.593	Maylandia_zebra
MGP_PahariEiJ_G0031540	-	71	98.099	ENSMAUG00000018038	Sept6	62	98.099	Mesocricetus_auratus
MGP_PahariEiJ_G0031540	-	69	97.276	ENSMOCG00000000500	Sept6	60	97.628	Microtus_ochrogaster
MGP_PahariEiJ_G0031540	-	71	89.734	ENSMMOG00000004176	sept6	61	89.734	Mola_mola
MGP_PahariEiJ_G0031540	-	71	87.452	ENSMALG00000007921	sept6	62	87.452	Monopterus_albus
MGP_PahariEiJ_G0031540	-	71	98.479	MGP_CAROLIEiJ_G0032996	Sept6	80	99.115	Mus_caroli
MGP_PahariEiJ_G0031540	-	71	98.099	ENSMUSG00000050379	Sept6	80	99.115	Mus_musculus
MGP_PahariEiJ_G0031540	-	71	98.479	MGP_SPRETEiJ_G0034149	Sept6	80	99.115	Mus_spretus
MGP_PahariEiJ_G0031540	-	68	95.652	ENSMLUG00000005623	SEPT6	58	95.652	Myotis_lucifugus
MGP_PahariEiJ_G0031540	-	71	96.958	ENSNGAG00000010702	Sept6	62	96.958	Nannospalax_galili
MGP_PahariEiJ_G0031540	-	71	75.665	ENSNBRG00000011675	sept6	60	75.665	Neolamprologus_brichardi
MGP_PahariEiJ_G0031540	-	71	95.817	ENSNLEG00000014873	SEPT6	62	95.817	Nomascus_leucogenys
MGP_PahariEiJ_G0031540	-	71	88.593	ENSONIG00000002528	sept6	61	88.593	Oreochromis_niloticus
MGP_PahariEiJ_G0031540	-	71	88.593	ENSORLG00000000997	sept6	62	88.593	Oryzias_latipes
MGP_PahariEiJ_G0031540	-	71	88.593	ENSORLG00020003886	sept6	62	88.593	Oryzias_latipes_hni
MGP_PahariEiJ_G0031540	-	71	88.593	ENSORLG00015013025	sept6	62	88.593	Oryzias_latipes_hsok
MGP_PahariEiJ_G0031540	-	71	86.692	ENSOMEG00000014650	sept6	62	86.692	Oryzias_melastigma
MGP_PahariEiJ_G0031540	-	71	95.817	ENSPPAG00000040865	SEPT6	62	95.817	Pan_paniscus
MGP_PahariEiJ_G0031540	-	71	96.198	ENSPPRG00000023588	SEPT6	62	96.198	Panthera_pardus
MGP_PahariEiJ_G0031540	-	67	96.761	ENSPTIG00000015338	SEPT6	69	96.761	Panthera_tigris_altaica
MGP_PahariEiJ_G0031540	-	71	95.437	ENSPTRG00000022227	SEPT6	62	95.437	Pan_troglodytes
MGP_PahariEiJ_G0031540	-	71	95.817	ENSPANG00000000899	SEPT6	62	95.817	Papio_anubis
MGP_PahariEiJ_G0031540	-	71	83.650	ENSPKIG00000019114	sept6	62	83.650	Paramormyrops_kingsleyae
MGP_PahariEiJ_G0031540	-	71	90.494	ENSPKIG00000013948	SEPT6	62	90.494	Paramormyrops_kingsleyae
MGP_PahariEiJ_G0031540	-	74	84.783	ENSPMGG00000012133	sept6	65	84.783	Periophthalmus_magnuspinnatus
MGP_PahariEiJ_G0031540	-	71	98.099	ENSPEMG00000016450	Sept6	62	98.099	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0031540	-	71	91.255	ENSPCIG00000028910	SEPT6	62	91.255	Phascolarctos_cinereus
MGP_PahariEiJ_G0031540	-	69	89.412	ENSPFOG00000024721	sept6	59	89.412	Poecilia_formosa
MGP_PahariEiJ_G0031540	-	71	88.593	ENSPLAG00000019878	sept6	62	88.593	Poecilia_latipinna
MGP_PahariEiJ_G0031540	-	60	89.593	ENSPLAG00000005147	sept6	93	88.444	Poecilia_latipinna
MGP_PahariEiJ_G0031540	-	71	88.593	ENSPMEG00000023470	sept6	62	88.593	Poecilia_mexicana
MGP_PahariEiJ_G0031540	-	71	88.213	ENSPREG00000012310	sept6	62	88.213	Poecilia_reticulata
MGP_PahariEiJ_G0031540	-	71	95.802	ENSPPYG00000020673	SEPT6	62	95.802	Pongo_abelii
MGP_PahariEiJ_G0031540	-	71	88.593	ENSPNYG00000009709	sept6	62	88.593	Pundamilia_nyererei
MGP_PahariEiJ_G0031540	-	71	89.354	ENSPNAG00000021638	sept6	61	89.354	Pygocentrus_nattereri
MGP_PahariEiJ_G0031540	-	71	95.817	ENSRBIG00000044672	SEPT6	62	95.817	Rhinopithecus_bieti
MGP_PahariEiJ_G0031540	-	71	95.817	ENSRROG00000038667	SEPT6	62	95.817	Rhinopithecus_roxellana
MGP_PahariEiJ_G0031540	-	71	96.198	ENSSBOG00000024143	SEPT6	62	96.198	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0031540	-	71	90.458	ENSSHAG00000007460	SEPT6	61	90.458	Sarcophilus_harrisii
MGP_PahariEiJ_G0031540	-	71	87.072	ENSSFOG00015005477	sept6	62	87.072	Scleropages_formosus
MGP_PahariEiJ_G0031540	-	71	88.213	ENSSFOG00015010832	SEPT6	61	88.933	Scleropages_formosus
MGP_PahariEiJ_G0031540	-	71	88.973	ENSSMAG00000012785	sept6	62	88.973	Scophthalmus_maximus
MGP_PahariEiJ_G0031540	-	71	88.973	ENSSDUG00000005575	sept6	62	88.973	Seriola_dumerili
MGP_PahariEiJ_G0031540	-	71	88.973	ENSSLDG00000003277	sept6	62	88.973	Seriola_lalandi_dorsalis
MGP_PahariEiJ_G0031540	-	71	88.973	ENSSPAG00000010108	sept6	62	88.973	Stegastes_partitus
MGP_PahariEiJ_G0031540	-	71	87.452	ENSTRUG00000010830	sept6	62	87.452	Takifugu_rubripes
MGP_PahariEiJ_G0031540	-	71	85.171	ENSTNIG00000015761	sept6	61	85.171	Tetraodon_nigroviridis
MGP_PahariEiJ_G0031540	-	70	78.764	ENSXCOG00000016712	sept6	95	78.764	Xiphophorus_couchianus
MGP_PahariEiJ_G0031540	-	71	88.213	ENSXMAG00000013699	sept6	62	88.213	Xiphophorus_maculatus