EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0031869 (Gene tree)
Gene ID: 110313514
Gene Symbol: Rtl3
Alias: D430021I08Rik|Mar3|Mart3|ZHC5|Zcchc5
Full Name: retrotransposon Gag like 3
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Minus strand
Length: 3577 bases
Position: chrX:92490112-92493688
Accession: 110313514
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0090097	zf-CCHC	PF00098.23	0.00047	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0090097	-	2959	XM_021187857	MGP_PahariEiJ_P0090097	552 (aa)	XP_021043516	UPI000A30A850

Gene Model

Click here to download MGP_PahariEiJ_G0031869's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0031869's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0031869	Rtl3	79	53.659	ENSG00000179300	RTL3	99	50.709	Homo_sapiens
MGP_PahariEiJ_G0031869	Rtl3	76	56.808	ENSTSYG00000008776	RTL3	91	55.944	Carlito_syrichta
MGP_PahariEiJ_G0031869	Rtl3	100	75.986	ENSCGRG00001015952	Rtl3	100	75.986	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0031869	Rtl3	100	58.719	ENSDORG00000029995	Rtl3	100	58.363	Dipodomys_ordii
MGP_PahariEiJ_G0031869	Rtl3	100	52.120	ENSECAG00000029496	RTL3	100	51.590	Equus_caballus
MGP_PahariEiJ_G0031869	Rtl3	100	55.245	ENSSTOG00000027152	RTL3	100	55.245	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0031869	Rtl3	100	54.513	ENSJJAG00000014790	-	100	54.159	Jaculus_jaculus
MGP_PahariEiJ_G0031869	Rtl3	100	74.014	ENSMAUG00000011823	Rtl3	100	74.014	Mesocricetus_auratus
MGP_PahariEiJ_G0031869	Rtl3	100	53.915	ENSMICG00000004901	RTL3	100	53.203	Microcebus_murinus
MGP_PahariEiJ_G0031869	Rtl3	100	74.688	ENSMOCG00000017247	Rtl3	100	74.688	Microtus_ochrogaster
MGP_PahariEiJ_G0031869	Rtl3	100	92.405	MGP_CAROLIEiJ_G0033333	Rtl3	100	92.405	Mus_caroli
MGP_PahariEiJ_G0031869	Rtl3	100	93.490	ENSMUSG00000047686	Rtl3	100	93.490	Mus_musculus
MGP_PahariEiJ_G0031869	Rtl3	100	93.309	MGP_SPRETEiJ_G0034497	Rtl3	100	93.309	Mus_spretus
MGP_PahariEiJ_G0031869	Rtl3	100	63.230	ENSNGAG00000002851	Rtl3	100	63.889	Nannospalax_galili
MGP_PahariEiJ_G0031869	Rtl3	100	57.958	ENSOCUG00000025689	RTL3	100	57.958	Oryctolagus_cuniculus
MGP_PahariEiJ_G0031869	Rtl3	100	55.496	ENSPCOG00000016711	RTL3	100	55.221	Propithecus_coquereli
MGP_PahariEiJ_G0031869	Rtl3	100	87.950	ENSRNOG00000002429	Rtl3	100	87.950	Rattus_norvegicus
MGP_PahariEiJ_G0031869	Rtl3	100	47.257	ENSTBEG00000002464	RTL3	100	46.903	Tupaia_belangeri