EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0031923 (Gene tree)
Gene ID: 110313285
Gene Symbol: Cstf2
Alias: C630034J23Rik|Cstf64
Full Name: cleavage stimulation factor subunit 2
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Plus strand
Length: 27945 bases
Position: chrX:113135999-113163943
Accession: 110313285
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0090245	RRM_1	PF00076.22	2.3e-25	1	1
MGP_PahariEiJ_P0090243	RRM_1	PF00076.22	2.6e-25	1	1
MGP_PahariEiJ_P0090244	RRM_1	PF00076.22	2.8e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0090246	-	747	-	-	- (aa)	-	-
MGP_PahariEiJ_T0090247	-	7511	-	-	- (aa)	-	-
MGP_PahariEiJ_T0090244	-	4564	XM_021187301	MGP_PahariEiJ_P0090244	579 (aa)	XP_021042960	UPI000A30F39F
MGP_PahariEiJ_T0090245	-	2785	-	MGP_PahariEiJ_P0090245	509 (aa)	-	-
MGP_PahariEiJ_T0090251	-	571	-	MGP_PahariEiJ_P0090251	190 (aa)	-	-
MGP_PahariEiJ_T0090243	-	3712	-	MGP_PahariEiJ_P0090243	553 (aa)	XP_021042961	UPI000A30B4B0
MGP_PahariEiJ_T0090248	-	551	-	MGP_PahariEiJ_P0090248	183 (aa)	-	-
MGP_PahariEiJ_T0090249	-	2110	-	MGP_PahariEiJ_P0090249	628 (aa)	-	-
MGP_PahariEiJ_T0090250	-	772	-	MGP_PahariEiJ_P0090250	257 (aa)	-	-

Gene Model

Click here to download MGP_PahariEiJ_G0031923's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0031923's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PahariEiJ_G0031923	Cstf2	99	67.228	MGP_PahariEiJ_G0014365	Cstf2t	99	63.198

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0031923	Cstf2	100	93.437	ENSG00000101811	CSTF2	96	98.140	Homo_sapiens
MGP_PahariEiJ_G0031923	Cstf2	80	83.197	ENSAPOG00000005630	cstf2	96	75.986	Acanthochromis_polyacanthus
MGP_PahariEiJ_G0031923	Cstf2	100	88.779	ENSAMEG00000002082	CSTF2	100	88.614	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0031923	Cstf2	87	83.884	ENSACIG00000012852	cstf2	96	76.259	Amphilophus_citrinellus
MGP_PahariEiJ_G0031923	Cstf2	80	81.328	ENSAOCG00000020905	cstf2	96	75.812	Amphiprion_ocellaris
MGP_PahariEiJ_G0031923	Cstf2	80	81.328	ENSAPEG00000006526	cstf2	96	76.173	Amphiprion_percula
MGP_PahariEiJ_G0031923	Cstf2	80	81.070	ENSATEG00000018186	cstf2	95	78.467	Anabas_testudineus
MGP_PahariEiJ_G0031923	Cstf2	97	74.619	ENSAPLG00000007255	CSTF2	98	73.534	Anas_platyrhynchos
MGP_PahariEiJ_G0031923	Cstf2	100	92.516	ENSANAG00000022342	CSTF2	100	92.357	Aotus_nancymaae
MGP_PahariEiJ_G0031923	Cstf2	66	83.884	ENSACLG00000000779	cstf2	92	79.336	Astatotilapia_calliptera
MGP_PahariEiJ_G0031923	Cstf2	94	80.992	ENSAMXG00000021477	cstf2	96	98.413	Astyanax_mexicanus
MGP_PahariEiJ_G0031923	Cstf2	100	90.846	ENSBTAG00000003547	CSTF2	100	90.674	Bos_taurus
MGP_PahariEiJ_G0031923	Cstf2	100	92.573	ENSCJAG00000004422	CSTF2	100	93.603	Callithrix_jacchus
MGP_PahariEiJ_G0031923	Cstf2	100	92.228	ENSCAFG00000017551	CSTF2	100	92.055	Canis_familiaris
MGP_PahariEiJ_G0031923	Cstf2	100	92.675	ENSCAFG00020007619	CSTF2	100	92.516	Canis_lupus_dingo
MGP_PahariEiJ_G0031923	Cstf2	100	90.501	ENSCHIG00000016994	CSTF2	100	90.328	Capra_hircus
MGP_PahariEiJ_G0031923	Cstf2	100	93.437	ENSTSYG00000006529	CSTF2	100	93.264	Carlito_syrichta
MGP_PahariEiJ_G0031923	Cstf2	100	92.401	ENSCPOG00000015255	CSTF2	100	92.228	Cavia_porcellus
MGP_PahariEiJ_G0031923	Cstf2	100	92.573	ENSCCAG00000032975	CSTF2	100	92.401	Cebus_capucinus
MGP_PahariEiJ_G0031923	Cstf2	100	92.919	ENSCATG00000022835	CSTF2	100	92.746	Cercocebus_atys
MGP_PahariEiJ_G0031923	Cstf2	100	91.710	ENSCLAG00000001904	CSTF2	100	91.537	Chinchilla_lanigera
MGP_PahariEiJ_G0031923	Cstf2	100	89.983	ENSCSAG00000010360	CSTF2	100	89.816	Chlorocebus_sabaeus
MGP_PahariEiJ_G0031923	Cstf2	71	99.371	ENSCHOG00000012803	CSTF2	75	99.371	Choloepus_hoffmanni
MGP_PahariEiJ_G0031923	Cstf2	100	74.880	ENSCPBG00000014293	CSTF2	100	74.400	Chrysemys_picta_bellii
MGP_PahariEiJ_G0031923	Cstf2	100	93.092	ENSCANG00000030612	CSTF2	100	92.919	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0031923	Cstf2	100	97.931	ENSCGRG00001023023	Cstf2	100	97.931	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0031923	Cstf2	100	94.483	ENSCGRG00000003897	Cstf2	100	94.483	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0031923	Cstf2	80	84.232	ENSCVAG00000005731	cstf2	95	77.737	Cyprinodon_variegatus
MGP_PahariEiJ_G0031923	Cstf2	74	98.182	ENSDARG00000090788	cstf2	91	98.305	Danio_rerio
MGP_PahariEiJ_G0031923	Cstf2	100	90.534	ENSDORG00000007195	Cstf2	100	90.361	Dipodomys_ordii
MGP_PahariEiJ_G0031923	Cstf2	74	94.595	ENSETEG00000004931	CSTF2	68	94.595	Echinops_telfairi
MGP_PahariEiJ_G0031923	Cstf2	100	89.149	ENSEASG00005001216	CSTF2	100	88.982	Equus_asinus_asinus
MGP_PahariEiJ_G0031923	Cstf2	100	92.228	ENSECAG00000009325	CSTF2	100	92.055	Equus_caballus
MGP_PahariEiJ_G0031923	Cstf2	100	91.883	ENSFCAG00000007000	CSTF2	100	91.710	Felis_catus
MGP_PahariEiJ_G0031923	Cstf2	93	72.047	ENSFALG00000003859	CSTF2	100	73.675	Ficedula_albicollis
MGP_PahariEiJ_G0031923	Cstf2	100	92.834	ENSFDAG00000002416	CSTF2	100	92.675	Fukomys_damarensis
MGP_PahariEiJ_G0031923	Cstf2	87	80.894	ENSFHEG00000017065	cstf2	90	76.952	Fundulus_heteroclitus
MGP_PahariEiJ_G0031923	Cstf2	79	78.059	ENSGMOG00000005145	cstf2	99	56.577	Gadus_morhua
MGP_PahariEiJ_G0031923	Cstf2	100	78.231	ENSGALG00000006760	CSTF2	99	84.333	Gallus_gallus
MGP_PahariEiJ_G0031923	Cstf2	81	81.526	ENSGAFG00000020027	cstf2	96	75.445	Gambusia_affinis
MGP_PahariEiJ_G0031923	Cstf2	99	57.070	ENSGACG00000017326	cstf2	94	83.673	Gasterosteus_aculeatus
MGP_PahariEiJ_G0031923	Cstf2	100	76.847	ENSGAGG00000006037	CSTF2	100	76.585	Gopherus_agassizii
MGP_PahariEiJ_G0031923	Cstf2	100	93.437	ENSGGOG00000022267	CSTF2	100	93.264	Gorilla_gorilla
MGP_PahariEiJ_G0031923	Cstf2	80	65.566	ENSHBUG00000016183	cstf2	92	78.182	Haplochromis_burtoni
MGP_PahariEiJ_G0031923	Cstf2	100	92.573	ENSHGLG00000000659	-	100	92.401	Heterocephalus_glaber_female
MGP_PahariEiJ_G0031923	Cstf2	100	78.584	ENSHGLG00000013455	-	100	78.411	Heterocephalus_glaber_female
MGP_PahariEiJ_G0031923	Cstf2	100	92.573	ENSHGLG00100001130	-	100	92.401	Heterocephalus_glaber_male
MGP_PahariEiJ_G0031923	Cstf2	100	78.756	ENSHGLG00100015391	-	100	78.584	Heterocephalus_glaber_male
MGP_PahariEiJ_G0031923	Cstf2	80	83.884	ENSHCOG00000005157	cstf2	97	77.455	Hippocampus_comes
MGP_PahariEiJ_G0031923	Cstf2	100	60.526	ENSIPUG00000017839	cstf2	99	60.647	Ictalurus_punctatus
MGP_PahariEiJ_G0031923	Cstf2	100	92.919	ENSSTOG00000023445	CSTF2	100	92.746	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0031923	Cstf2	100	93.955	ENSJJAG00000020507	Cstf2	100	93.782	Jaculus_jaculus
MGP_PahariEiJ_G0031923	Cstf2	87	81.893	ENSKMAG00000001068	cstf2	96	61.441	Kryptolebias_marmoratus
MGP_PahariEiJ_G0031923	Cstf2	56	94.915	ENSLBEG00000028720	cstf2	85	94.915	Labrus_bergylta
MGP_PahariEiJ_G0031923	Cstf2	99	64.869	ENSLACG00000015927	CSTF2	99	63.115	Latimeria_chalumnae
MGP_PahariEiJ_G0031923	Cstf2	98	76.389	ENSLOCG00000015300	cstf2	93	63.714	Lepisosteus_oculatus
MGP_PahariEiJ_G0031923	Cstf2	100	88.601	ENSLAFG00000000474	CSTF2	100	88.428	Loxodonta_africana
MGP_PahariEiJ_G0031923	Cstf2	100	93.092	ENSMFAG00000043888	CSTF2	100	92.919	Macaca_fascicularis
MGP_PahariEiJ_G0031923	Cstf2	100	90.323	ENSMMUG00000013008	CSTF2	99	92.376	Macaca_mulatta
MGP_PahariEiJ_G0031923	Cstf2	100	93.092	ENSMNEG00000041824	CSTF2	100	92.919	Macaca_nemestrina
MGP_PahariEiJ_G0031923	Cstf2	100	93.092	ENSMLEG00000036870	CSTF2	100	92.919	Mandrillus_leucophaeus
MGP_PahariEiJ_G0031923	Cstf2	78	81.116	ENSMAMG00000020364	cstf2	95	73.507	Mastacembelus_armatus
MGP_PahariEiJ_G0031923	Cstf2	66	83.884	ENSMZEG00005007200	cstf2	95	79.336	Maylandia_zebra
MGP_PahariEiJ_G0031923	Cstf2	92	75.107	ENSMGAG00000004139	CSTF2	99	83.665	Meleagris_gallopavo
MGP_PahariEiJ_G0031923	Cstf2	100	97.931	ENSMAUG00000000965	Cstf2	100	97.931	Mesocricetus_auratus
MGP_PahariEiJ_G0031923	Cstf2	100	93.312	ENSMICG00000014121	CSTF2	100	93.153	Microcebus_murinus
MGP_PahariEiJ_G0031923	Cstf2	100	96.207	ENSMOCG00000008081	Cstf2	100	96.207	Microtus_ochrogaster
MGP_PahariEiJ_G0031923	Cstf2	82	92.821	ENSMMOG00000000538	cstf2	96	54.610	Mola_mola
MGP_PahariEiJ_G0031923	Cstf2	100	74.568	ENSMODG00000011785	CSTF2	100	77.303	Monodelphis_domestica
MGP_PahariEiJ_G0031923	Cstf2	100	99.841	MGP_CAROLIEiJ_G0033383	Cstf2	100	99.841	Mus_caroli
MGP_PahariEiJ_G0031923	Cstf2	100	99.655	ENSMUSG00000031256	Cstf2	100	99.655	Mus_musculus
MGP_PahariEiJ_G0031923	Cstf2	100	99.523	MGP_SPRETEiJ_G0034548	Cstf2	100	99.523	Mus_spretus
MGP_PahariEiJ_G0031923	Cstf2	100	91.785	ENSMPUG00000002339	CSTF2	100	91.627	Mustela_putorius_furo
MGP_PahariEiJ_G0031923	Cstf2	100	91.284	ENSMLUG00000004598	CSTF2	98	90.938	Myotis_lucifugus
MGP_PahariEiJ_G0031923	Cstf2	100	96.200	ENSNGAG00000021985	Cstf2	100	96.200	Nannospalax_galili
MGP_PahariEiJ_G0031923	Cstf2	92	67.632	ENSNBRG00000021694	cstf2	100	55.699	Neolamprologus_brichardi
MGP_PahariEiJ_G0031923	Cstf2	100	93.092	ENSNLEG00000007510	CSTF2	100	92.919	Nomascus_leucogenys
MGP_PahariEiJ_G0031923	Cstf2	100	75.648	ENSMEUG00000007875	-	100	76.511	Notamacropus_eugenii
MGP_PahariEiJ_G0031923	Cstf2	100	79.102	ENSMEUG00000011186	-	100	81.520	Notamacropus_eugenii
MGP_PahariEiJ_G0031923	Cstf2	91	76.326	ENSMEUG00000014025	-	100	78.030	Notamacropus_eugenii
MGP_PahariEiJ_G0031923	Cstf2	84	88.293	ENSOPRG00000003106	CSTF2	87	80.995	Ochotona_princeps
MGP_PahariEiJ_G0031923	Cstf2	100	91.364	ENSODEG00000002059	CSTF2	100	91.192	Octodon_degus
MGP_PahariEiJ_G0031923	Cstf2	90	80.800	ENSONIG00000002631	cstf2	99	59.213	Oreochromis_niloticus
MGP_PahariEiJ_G0031923	Cstf2	87	100.000	ENSOANG00000004208	CSTF2	87	92.857	Ornithorhynchus_anatinus
MGP_PahariEiJ_G0031923	Cstf2	100	92.228	ENSOCUG00000010468	CSTF2	100	92.055	Oryctolagus_cuniculus
MGP_PahariEiJ_G0031923	Cstf2	86	81.328	ENSORLG00000001380	cstf2	96	74.648	Oryzias_latipes
MGP_PahariEiJ_G0031923	Cstf2	86	81.743	ENSORLG00020021917	cstf2	96	75.000	Oryzias_latipes_hni
MGP_PahariEiJ_G0031923	Cstf2	86	81.328	ENSORLG00015011996	cstf2	96	74.648	Oryzias_latipes_hsok
MGP_PahariEiJ_G0031923	Cstf2	86	82.573	ENSOMEG00000015507	cstf2	96	75.779	Oryzias_melastigma
MGP_PahariEiJ_G0031923	Cstf2	100	91.601	ENSOGAG00000011192	CSTF2	100	90.143	Otolemur_garnettii
MGP_PahariEiJ_G0031923	Cstf2	100	90.501	ENSOARG00000001022	CSTF2	100	90.328	Ovis_aries
MGP_PahariEiJ_G0031923	Cstf2	100	93.437	ENSPPAG00000031804	CSTF2	100	93.264	Pan_paniscus
MGP_PahariEiJ_G0031923	Cstf2	100	92.055	ENSPPRG00000022492	CSTF2	100	91.883	Panthera_pardus
MGP_PahariEiJ_G0031923	Cstf2	100	91.710	ENSPTIG00000009922	CSTF2	100	91.537	Panthera_tigris_altaica
MGP_PahariEiJ_G0031923	Cstf2	100	93.437	ENSPTRG00000022090	CSTF2	100	93.264	Pan_troglodytes
MGP_PahariEiJ_G0031923	Cstf2	100	93.471	ENSPANG00000002303	CSTF2	100	93.312	Papio_anubis
MGP_PahariEiJ_G0031923	Cstf2	88	78.519	ENSPKIG00000005033	cstf2	97	59.386	Paramormyrops_kingsleyae
MGP_PahariEiJ_G0031923	Cstf2	80	82.988	ENSPMGG00000006534	cstf2	96	74.386	Periophthalmus_magnuspinnatus
MGP_PahariEiJ_G0031923	Cstf2	100	97.069	ENSPEMG00000019415	Cstf2	100	97.069	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0031923	Cstf2	100	75.286	ENSPCIG00000002989	CSTF2	100	77.087	Phascolarctos_cinereus
MGP_PahariEiJ_G0031923	Cstf2	81	81.928	ENSPLAG00000011176	cstf2	95	77.737	Poecilia_latipinna
MGP_PahariEiJ_G0031923	Cstf2	81	81.928	ENSPMEG00000017743	cstf2	96	75.618	Poecilia_mexicana
MGP_PahariEiJ_G0031923	Cstf2	82	62.755	ENSPREG00000011481	cstf2	84	63.636	Poecilia_reticulata
MGP_PahariEiJ_G0031923	Cstf2	100	90.150	ENSPPYG00000020541	CSTF2	100	89.983	Pongo_abelii
MGP_PahariEiJ_G0031923	Cstf2	100	93.092	ENSPCOG00000027744	CSTF2	100	92.919	Propithecus_coquereli
MGP_PahariEiJ_G0031923	Cstf2	97	77.281	ENSPVAG00000008342	CSTF2	100	76.565	Pteropus_vampyrus
MGP_PahariEiJ_G0031923	Cstf2	61	83.197	ENSPNYG00000010852	cstf2	94	91.781	Pundamilia_nyererei
MGP_PahariEiJ_G0031923	Cstf2	99	61.765	ENSPNAG00000018887	cstf2	97	61.765	Pygocentrus_nattereri
MGP_PahariEiJ_G0031923	Cstf2	100	98.276	ENSRNOG00000048025	Cstf2	100	98.276	Rattus_norvegicus
MGP_PahariEiJ_G0031923	Cstf2	100	91.364	ENSRBIG00000030745	CSTF2	100	91.192	Rhinopithecus_bieti
MGP_PahariEiJ_G0031923	Cstf2	100	92.228	ENSRROG00000045042	CSTF2	100	92.055	Rhinopithecus_roxellana
MGP_PahariEiJ_G0031923	Cstf2	100	92.994	ENSSBOG00000021649	CSTF2	100	92.834	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0031923	Cstf2	96	98.214	ENSSHAG00000003681	CSTF2	92	77.187	Sarcophilus_harrisii
MGP_PahariEiJ_G0031923	Cstf2	99	64.089	ENSSFOG00015006348	cstf2	97	62.862	Scleropages_formosus
MGP_PahariEiJ_G0031923	Cstf2	79	83.817	ENSSMAG00000013463	cstf2	94	77.419	Scophthalmus_maximus
MGP_PahariEiJ_G0031923	Cstf2	93	78.270	ENSSPUG00000005288	-	99	85.185	Sphenodon_punctatus
MGP_PahariEiJ_G0031923	Cstf2	100	91.192	ENSSSCG00000012486	CSTF2	100	92.256	Sus_scrofa
MGP_PahariEiJ_G0031923	Cstf2	100	78.136	ENSTGUG00000002253	CSTF2	100	78.305	Taeniopygia_guttata
MGP_PahariEiJ_G0031923	Cstf2	99	60.959	ENSTNIG00000016860	cstf2	99	59.556	Tetraodon_nigroviridis
MGP_PahariEiJ_G0031923	Cstf2	57	100.000	ENSTBEG00000010029	-	69	100.000	Tupaia_belangeri
MGP_PahariEiJ_G0031923	Cstf2	100	92.055	ENSTTRG00000013556	CSTF2	100	91.883	Tursiops_truncatus
MGP_PahariEiJ_G0031923	Cstf2	100	92.733	ENSUAMG00000026605	CSTF2	100	92.575	Ursus_americanus
MGP_PahariEiJ_G0031923	Cstf2	100	85.987	ENSUMAG00000012417	CSTF2	100	93.772	Ursus_maritimus
MGP_PahariEiJ_G0031923	Cstf2	73	90.962	ENSVPAG00000006466	CSTF2	72	90.962	Vicugna_pacos
MGP_PahariEiJ_G0031923	Cstf2	100	92.401	ENSVVUG00000004717	CSTF2	100	92.228	Vulpes_vulpes
MGP_PahariEiJ_G0031923	Cstf2	83	88.571	ENSXETG00000009642	cstf2	87	88.571	Xenopus_tropicalis
MGP_PahariEiJ_G0031923	Cstf2	80	78.189	ENSXCOG00000016436	cstf2	83	96.970	Xiphophorus_couchianus
MGP_PahariEiJ_G0031923	Cstf2	82	62.760	ENSXMAG00000013524	cstf2	97	60.387	Xiphophorus_maculatus