EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0031943 (Gene tree)
Gene ID: 110313998
Gene Symbol: Zmat1
Alias: B930008K04Rik
Full Name: zinc finger matrin-type 1
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Minus strand
Length: 31202 bases
Position: chrX:114032830-114064031
Accession: 110313998
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0090325	zf-met	PF12874.7	2.1e-05	1	1
MGP_PahariEiJ_P0090324	zf-met	PF12874.7	7e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0090325	-	3450	-	MGP_PahariEiJ_P0090325	647 (aa)	XP_021044131	UPI000A307033
MGP_PahariEiJ_T0090324	-	3327	-	MGP_PahariEiJ_P0090324	613 (aa)	-	-
MGP_PahariEiJ_T0090326	-	2049	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_PahariEiJ_G0031943's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0031943's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0031943	Zmat1	97	59.649	ENSG00000166432	ZMAT1	94	59.649	Homo_sapiens
MGP_PahariEiJ_G0031943	Zmat1	97	58.917	ENSAMEG00000004976	ZMAT1	100	58.917	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0031943	Zmat1	97	57.576	ENSANAG00000028725	ZMAT1	100	60.099	Aotus_nancymaae
MGP_PahariEiJ_G0031943	Zmat1	100	53.576	ENSBTAG00000003601	ZMAT1	87	54.399	Bos_taurus
MGP_PahariEiJ_G0031943	Zmat1	97	56.938	ENSCJAG00000019724	ZMAT1	100	56.938	Callithrix_jacchus
MGP_PahariEiJ_G0031943	Zmat1	97	58.758	ENSCAFG00000017730	ZMAT1	100	58.758	Canis_familiaris
MGP_PahariEiJ_G0031943	Zmat1	77	62.316	ENSCAFG00020007319	ZMAT1	100	62.316	Canis_lupus_dingo
MGP_PahariEiJ_G0031943	Zmat1	77	59.119	ENSCHIG00000010507	ZMAT1	100	59.119	Capra_hircus
MGP_PahariEiJ_G0031943	Zmat1	96	56.592	ENSTSYG00000007330	ZMAT1	99	56.731	Carlito_syrichta
MGP_PahariEiJ_G0031943	Zmat1	96	49.840	ENSCPOG00000000581	ZMAT1	97	50.000	Cavia_porcellus
MGP_PahariEiJ_G0031943	Zmat1	97	58.373	ENSCCAG00000023924	ZMAT1	100	58.373	Cebus_capucinus
MGP_PahariEiJ_G0031943	Zmat1	100	58.769	ENSCATG00000000551	ZMAT1	98	58.889	Cercocebus_atys
MGP_PahariEiJ_G0031943	Zmat1	100	47.920	ENSCLAG00000004197	ZMAT1	100	47.920	Chinchilla_lanigera
MGP_PahariEiJ_G0031943	Zmat1	100	62.212	ENSCSAG00000009795	ZMAT1	90	62.212	Chlorocebus_sabaeus
MGP_PahariEiJ_G0031943	Zmat1	100	35.849	ENSCPBG00000001356	ZMAT1	96	30.575	Chrysemys_picta_bellii
MGP_PahariEiJ_G0031943	Zmat1	96	59.581	ENSCANG00000037194	ZMAT1	99	59.581	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0031943	Zmat1	100	78.671	ENSCGRG00001023697	Zmat1	100	78.671	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0031943	Zmat1	97	77.583	ENSCGRG00000001964	Zmat1	99	77.955	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0031943	Zmat1	78	44.200	ENSDNOG00000044924	-	99	44.334	Dasypus_novemcinctus
MGP_PahariEiJ_G0031943	Zmat1	95	53.535	ENSDNOG00000014852	-	100	53.535	Dasypus_novemcinctus
MGP_PahariEiJ_G0031943	Zmat1	100	55.093	ENSDORG00000006821	Zmat1	100	55.247	Dipodomys_ordii
MGP_PahariEiJ_G0031943	Zmat1	96	46.486	ENSETEG00000020259	ZMAT1	99	46.006	Echinops_telfairi
MGP_PahariEiJ_G0031943	Zmat1	96	55.627	ENSEASG00005014185	ZMAT1	93	55.627	Equus_asinus_asinus
MGP_PahariEiJ_G0031943	Zmat1	100	59.322	ENSECAG00000013390	ZMAT1	100	62.526	Equus_caballus
MGP_PahariEiJ_G0031943	Zmat1	96	57.235	ENSFCAG00000023394	ZMAT1	99	57.235	Felis_catus
MGP_PahariEiJ_G0031943	Zmat1	99	49.922	ENSFDAG00000004063	ZMAT1	96	50.000	Fukomys_damarensis
MGP_PahariEiJ_G0031943	Zmat1	100	36.604	ENSGAGG00000002326	ZMAT1	100	31.061	Gopherus_agassizii
MGP_PahariEiJ_G0031943	Zmat1	97	59.649	ENSGGOG00000025784	ZMAT1	94	60.064	Gorilla_gorilla
MGP_PahariEiJ_G0031943	Zmat1	100	47.805	ENSHGLG00000002494	ZMAT1	100	48.074	Heterocephalus_glaber_female
MGP_PahariEiJ_G0031943	Zmat1	100	52.234	ENSHGLG00100004968	ZMAT1	100	52.234	Heterocephalus_glaber_male
MGP_PahariEiJ_G0031943	Zmat1	93	62.413	ENSSTOG00000011140	ZMAT1	100	62.731	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0031943	Zmat1	100	58.025	ENSJJAG00000020188	Zmat1	100	58.025	Jaculus_jaculus
MGP_PahariEiJ_G0031943	Zmat1	91	50.082	ENSLAFG00000015656	ZMAT1	100	49.918	Loxodonta_africana
MGP_PahariEiJ_G0031943	Zmat1	86	54.707	ENSMFAG00000042343	ZMAT1	91	54.707	Macaca_fascicularis
MGP_PahariEiJ_G0031943	Zmat1	100	62.366	ENSMMUG00000002151	ZMAT1	100	62.366	Macaca_mulatta
MGP_PahariEiJ_G0031943	Zmat1	100	61.905	ENSMNEG00000036310	ZMAT1	96	58.713	Macaca_nemestrina
MGP_PahariEiJ_G0031943	Zmat1	98	58.870	ENSMLEG00000005031	ZMAT1	96	58.870	Mandrillus_leucophaeus
MGP_PahariEiJ_G0031943	Zmat1	100	77.898	ENSMAUG00000002941	Zmat1	100	77.898	Mesocricetus_auratus
MGP_PahariEiJ_G0031943	Zmat1	96	59.968	ENSMICG00000003313	ZMAT1	99	59.968	Microcebus_murinus
MGP_PahariEiJ_G0031943	Zmat1	100	74.062	ENSMOCG00000000169	Zmat1	100	74.062	Microtus_ochrogaster
MGP_PahariEiJ_G0031943	Zmat1	100	93.818	ENSMUSG00000052676	Zmat1	100	93.818	Mus_musculus
MGP_PahariEiJ_G0031943	Zmat1	100	93.827	MGP_SPRETEiJ_G0034567	Zmat1	100	93.827	Mus_spretus
MGP_PahariEiJ_G0031943	Zmat1	96	51.223	ENSMPUG00000002130	ZMAT1	99	51.153	Mustela_putorius_furo
MGP_PahariEiJ_G0031943	Zmat1	97	52.765	ENSMLUG00000004417	ZMAT1	100	52.291	Myotis_lucifugus
MGP_PahariEiJ_G0031943	Zmat1	100	69.494	ENSNGAG00000006608	Zmat1	100	69.494	Nannospalax_galili
MGP_PahariEiJ_G0031943	Zmat1	97	56.051	ENSNLEG00000030520	ZMAT1	94	56.051	Nomascus_leucogenys
MGP_PahariEiJ_G0031943	Zmat1	67	50.962	ENSOPRG00000009950	-	100	50.962	Ochotona_princeps
MGP_PahariEiJ_G0031943	Zmat1	88	50.273	ENSOCUG00000004164	ZMAT1	84	49.727	Oryctolagus_cuniculus
MGP_PahariEiJ_G0031943	Zmat1	97	58.917	ENSOGAG00000033601	ZMAT1	100	58.917	Otolemur_garnettii
MGP_PahariEiJ_G0031943	Zmat1	96	56.410	ENSOARG00000001897	ZMAT1	99	56.410	Ovis_aries
MGP_PahariEiJ_G0031943	Zmat1	97	59.968	ENSPPAG00000039554	ZMAT1	95	59.841	Pan_paniscus
MGP_PahariEiJ_G0031943	Zmat1	96	56.913	ENSPPRG00000005258	ZMAT1	99	56.913	Panthera_pardus
MGP_PahariEiJ_G0031943	Zmat1	96	56.913	ENSPTIG00000019057	ZMAT1	99	56.913	Panthera_tigris_altaica
MGP_PahariEiJ_G0031943	Zmat1	100	62.712	ENSPTRG00000041840	ZMAT1	95	59.841	Pan_troglodytes
MGP_PahariEiJ_G0031943	Zmat1	100	79.784	ENSPEMG00000009944	Zmat1	100	79.784	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0031943	Zmat1	97	57.166	ENSPPYG00000020561	ZMAT1	93	57.166	Pongo_abelii
MGP_PahariEiJ_G0031943	Zmat1	87	53.279	ENSPCAG00000010283	ZMAT1	94	53.279	Procavia_capensis
MGP_PahariEiJ_G0031943	Zmat1	95	58.442	ENSPCOG00000021386	ZMAT1	98	58.442	Propithecus_coquereli
MGP_PahariEiJ_G0031943	Zmat1	95	57.724	ENSPVAG00000013206	ZMAT1	98	57.724	Pteropus_vampyrus
MGP_PahariEiJ_G0031943	Zmat1	100	86.090	ENSRNOG00000024135	Zmat1	100	86.090	Rattus_norvegicus
MGP_PahariEiJ_G0031943	Zmat1	95	59.772	ENSRBIG00000034121	ZMAT1	94	59.772	Rhinopithecus_bieti
MGP_PahariEiJ_G0031943	Zmat1	96	59.486	ENSRROG00000036747	ZMAT1	93	59.486	Rhinopithecus_roxellana
MGP_PahariEiJ_G0031943	Zmat1	97	57.735	ENSSBOG00000029970	ZMAT1	100	60.265	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0031943	Zmat1	83	41.445	ENSSHAG00000011087	-	100	41.445	Sarcophilus_harrisii
MGP_PahariEiJ_G0031943	Zmat1	61	48.148	ENSSARG00000003063	-	62	48.148	Sorex_araneus
MGP_PahariEiJ_G0031943	Zmat1	69	72.414	ENSSPUG00000004951	ZMAT1	92	41.135	Sphenodon_punctatus
MGP_PahariEiJ_G0031943	Zmat1	96	60.514	ENSSSCG00000012512	ZMAT1	100	62.683	Sus_scrofa
MGP_PahariEiJ_G0031943	Zmat1	91	56.250	ENSTBEG00000012967	ZMAT1	100	56.250	Tupaia_belangeri
MGP_PahariEiJ_G0031943	Zmat1	96	58.360	ENSTTRG00000016662	ZMAT1	99	58.039	Tursiops_truncatus
MGP_PahariEiJ_G0031943	Zmat1	77	62.737	ENSUAMG00000015209	ZMAT1	100	62.737	Ursus_americanus
MGP_PahariEiJ_G0031943	Zmat1	77	62.737	ENSUMAG00000000627	ZMAT1	100	62.737	Ursus_maritimus
MGP_PahariEiJ_G0031943	Zmat1	96	59.968	ENSVPAG00000006267	ZMAT1	99	59.968	Vicugna_pacos
MGP_PahariEiJ_G0031943	Zmat1	100	61.231	ENSVVUG00000005342	ZMAT1	90	61.231	Vulpes_vulpes