EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0031986 (Gene tree)
Gene ID: 110313632
Gene Symbol: Rbm41
Alias: D330023I21Rik
Full Name: RNA binding motif protein 41
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Minus strand
Length: 104618 bases
Position: chrX:118697731-118802348
Accession: 110313632
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0090451	RRM_1	PF00076.22	7.6e-09	1	1
MGP_PahariEiJ_P0090453	RRM_1	PF00076.22	9e-09	1	1
MGP_PahariEiJ_P0090452	RRM_1	PF00076.22	9.6e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0090456	-	1644	-	-	- (aa)	-	-
MGP_PahariEiJ_T0090455	-	726	-	-	- (aa)	-	-
MGP_PahariEiJ_T0090454	-	1266	-	-	- (aa)	-	-
MGP_PahariEiJ_T0090453	-	2800	XM_021188080	MGP_PahariEiJ_P0090453	413 (aa)	XP_021043739	UPI000A304422
MGP_PahariEiJ_T0090452	-	3723	-	MGP_PahariEiJ_P0090452	425 (aa)	-	-
MGP_PahariEiJ_T0090451	-	3760	XM_021188079	MGP_PahariEiJ_P0090451	437 (aa)	XP_021043738	UPI000A30CAC4
MGP_PahariEiJ_T0090450	-	2221	-	MGP_PahariEiJ_P0090450	404 (aa)	-	-

Gene Model

Click here to download MGP_PahariEiJ_G0031986's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0031986's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0031986	Rbm41	100	88.136	ENSG00000089682	RBM41	98	93.467	Homo_sapiens
MGP_PahariEiJ_G0031986	Rbm41	99	88.321	ENSAMEG00000010490	RBM41	99	88.321	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0031986	Rbm41	93	41.080	ENSACIG00000014038	rbm41	96	40.741	Amphilophus_citrinellus
MGP_PahariEiJ_G0031986	Rbm41	90	42.513	ENSAOCG00000020927	rbm41	93	41.842	Amphiprion_ocellaris
MGP_PahariEiJ_G0031986	Rbm41	90	42.513	ENSAPEG00000001223	rbm41	93	41.842	Amphiprion_percula
MGP_PahariEiJ_G0031986	Rbm41	92	39.950	ENSATEG00000022968	rbm41	97	39.070	Anabas_testudineus
MGP_PahariEiJ_G0031986	Rbm41	87	42.526	ENSACAG00000014146	RBM41	80	42.105	Anolis_carolinensis
MGP_PahariEiJ_G0031986	Rbm41	100	87.872	ENSANAG00000037624	RBM41	100	87.872	Aotus_nancymaae
MGP_PahariEiJ_G0031986	Rbm41	93	40.141	ENSACLG00000024125	rbm41	97	39.269	Astatotilapia_calliptera
MGP_PahariEiJ_G0031986	Rbm41	98	40.000	ENSAMXG00000007109	rbm41	99	38.063	Astyanax_mexicanus
MGP_PahariEiJ_G0031986	Rbm41	100	88.787	ENSBTAG00000000955	RBM41	100	88.787	Bos_taurus
MGP_PahariEiJ_G0031986	Rbm41	100	86.728	ENSCJAG00000007957	RBM41	100	86.728	Callithrix_jacchus
MGP_PahariEiJ_G0031986	Rbm41	99	88.078	ENSCAFG00000017959	RBM41	99	88.078	Canis_familiaris
MGP_PahariEiJ_G0031986	Rbm41	99	88.399	ENSCAFG00020006764	RBM41	98	88.399	Canis_lupus_dingo
MGP_PahariEiJ_G0031986	Rbm41	100	88.136	ENSCHIG00000015945	RBM41	100	88.136	Capra_hircus
MGP_PahariEiJ_G0031986	Rbm41	100	87.409	ENSTSYG00000006980	RBM41	100	87.409	Carlito_syrichta
MGP_PahariEiJ_G0031986	Rbm41	100	85.812	ENSCPOG00000025052	RBM41	100	85.812	Cavia_porcellus
MGP_PahariEiJ_G0031986	Rbm41	100	87.409	ENSCCAG00000028014	RBM41	100	87.409	Cebus_capucinus
MGP_PahariEiJ_G0031986	Rbm41	100	87.167	ENSCATG00000020042	RBM41	100	87.167	Cercocebus_atys
MGP_PahariEiJ_G0031986	Rbm41	100	85.355	ENSCLAG00000002330	RBM41	100	85.355	Chinchilla_lanigera
MGP_PahariEiJ_G0031986	Rbm41	98	88.785	ENSCSAG00000009146	RBM41	93	88.785	Chlorocebus_sabaeus
MGP_PahariEiJ_G0031986	Rbm41	98	59.512	ENSCPBG00000001728	RBM41	98	59.512	Chrysemys_picta_bellii
MGP_PahariEiJ_G0031986	Rbm41	99	87.255	ENSCANG00000028836	RBM41	100	87.255	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0031986	Rbm41	100	91.762	ENSCGRG00001012295	Rbm41	100	91.762	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0031986	Rbm41	100	90.847	ENSCGRG00000010545	Rbm41	100	90.847	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0031986	Rbm41	94	40.580	ENSCSEG00000010491	rbm41	97	40.580	Cynoglossus_semilaevis
MGP_PahariEiJ_G0031986	Rbm41	96	42.389	ENSDARG00000054096	rbm41	99	41.190	Danio_rerio
MGP_PahariEiJ_G0031986	Rbm41	99	87.348	ENSDNOG00000013865	RBM41	99	87.348	Dasypus_novemcinctus
MGP_PahariEiJ_G0031986	Rbm41	98	85.082	ENSDORG00000008077	Rbm41	99	85.082	Dipodomys_ordii
MGP_PahariEiJ_G0031986	Rbm41	68	92.683	ENSETEG00000019681	-	68	92.683	Echinops_telfairi
MGP_PahariEiJ_G0031986	Rbm41	100	88.620	ENSECAG00000021846	RBM41	100	88.620	Equus_caballus
MGP_PahariEiJ_G0031986	Rbm41	99	83.902	ENSEEUG00000006722	RBM41	100	83.902	Erinaceus_europaeus
MGP_PahariEiJ_G0031986	Rbm41	96	38.117	ENSELUG00000007426	rbm41	93	38.117	Esox_lucius
MGP_PahariEiJ_G0031986	Rbm41	99	86.861	ENSFCAG00000001982	RBM41	85	86.861	Felis_catus
MGP_PahariEiJ_G0031986	Rbm41	94	56.298	ENSFALG00000011221	RBM41	90	56.298	Ficedula_albicollis
MGP_PahariEiJ_G0031986	Rbm41	100	87.872	ENSFDAG00000020264	RBM41	100	87.872	Fukomys_damarensis
MGP_PahariEiJ_G0031986	Rbm41	84	40.449	ENSFHEG00000006026	rbm41	91	40.449	Fundulus_heteroclitus
MGP_PahariEiJ_G0031986	Rbm41	96	38.653	ENSGMOG00000005876	rbm41	99	38.653	Gadus_morhua
MGP_PahariEiJ_G0031986	Rbm41	94	55.897	ENSGALG00000004832	RBM41	94	55.897	Gallus_gallus
MGP_PahariEiJ_G0031986	Rbm41	95	38.061	ENSGAFG00000011066	rbm41	92	39.234	Gambusia_affinis
MGP_PahariEiJ_G0031986	Rbm41	94	40.000	ENSGACG00000020842	rbm41	95	40.000	Gasterosteus_aculeatus
MGP_PahariEiJ_G0031986	Rbm41	94	59.184	ENSGAGG00000015064	RBM41	96	59.000	Gopherus_agassizii
MGP_PahariEiJ_G0031986	Rbm41	100	88.136	ENSGGOG00000006587	RBM41	100	88.136	Gorilla_gorilla
MGP_PahariEiJ_G0031986	Rbm41	93	40.376	ENSHBUG00000014307	rbm41	97	40.046	Haplochromis_burtoni
MGP_PahariEiJ_G0031986	Rbm41	98	89.277	ENSHGLG00000003803	RBM41	94	89.277	Heterocephalus_glaber_female
MGP_PahariEiJ_G0031986	Rbm41	98	89.277	ENSHGLG00100007396	RBM41	98	88.337	Heterocephalus_glaber_male
MGP_PahariEiJ_G0031986	Rbm41	93	32.603	ENSHCOG00000009614	rbm41	95	32.250	Hippocampus_comes
MGP_PahariEiJ_G0031986	Rbm41	98	39.408	ENSIPUG00000007379	rbm41	91	39.723	Ictalurus_punctatus
MGP_PahariEiJ_G0031986	Rbm41	96	90.261	ENSSTOG00000001604	RBM41	100	89.016	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0031986	Rbm41	99	87.731	ENSJJAG00000010415	Rbm41	99	87.731	Jaculus_jaculus
MGP_PahariEiJ_G0031986	Rbm41	93	40.048	ENSKMAG00000013436	rbm41	99	39.679	Kryptolebias_marmoratus
MGP_PahariEiJ_G0031986	Rbm41	95	48.227	ENSLACG00000012336	RBM41	100	48.227	Latimeria_chalumnae
MGP_PahariEiJ_G0031986	Rbm41	89	36.856	ENSLOCG00000014958	rbm41	77	58.140	Lepisosteus_oculatus
MGP_PahariEiJ_G0031986	Rbm41	99	87.586	ENSLAFG00000028266	RBM41	99	87.586	Loxodonta_africana
MGP_PahariEiJ_G0031986	Rbm41	99	87.500	ENSMFAG00000041338	RBM41	100	87.500	Macaca_fascicularis
MGP_PahariEiJ_G0031986	Rbm41	98	88.785	ENSMMUG00000023172	RBM41	98	87.097	Macaca_mulatta
MGP_PahariEiJ_G0031986	Rbm41	100	86.925	ENSMNEG00000009942	RBM41	100	86.925	Macaca_nemestrina
MGP_PahariEiJ_G0031986	Rbm41	99	87.010	ENSMLEG00000030890	RBM41	100	87.010	Mandrillus_leucophaeus
MGP_PahariEiJ_G0031986	Rbm41	95	39.636	ENSMAMG00000000581	rbm41	97	39.636	Mastacembelus_armatus
MGP_PahariEiJ_G0031986	Rbm41	90	40.678	ENSMZEG00005011676	rbm41	94	40.334	Maylandia_zebra
MGP_PahariEiJ_G0031986	Rbm41	68	54.965	ENSMGAG00000009663	RBM41	100	51.961	Meleagris_gallopavo
MGP_PahariEiJ_G0031986	Rbm41	100	91.991	ENSMAUG00000016409	Rbm41	100	91.991	Mesocricetus_auratus
MGP_PahariEiJ_G0031986	Rbm41	100	86.957	ENSMICG00000009750	RBM41	100	86.957	Microcebus_murinus
MGP_PahariEiJ_G0031986	Rbm41	100	93.822	ENSMOCG00000008323	Rbm41	100	93.822	Microtus_ochrogaster
MGP_PahariEiJ_G0031986	Rbm41	92	43.299	ENSMMOG00000014574	rbm41	96	43.299	Mola_mola
MGP_PahariEiJ_G0031986	Rbm41	100	62.410	ENSMODG00000002312	RBM41	100	62.410	Monodelphis_domestica
MGP_PahariEiJ_G0031986	Rbm41	93	40.471	ENSMALG00000010729	rbm41	97	40.139	Monopterus_albus
MGP_PahariEiJ_G0031986	Rbm41	99	99.440	MGP_CAROLIEiJ_G0033447	Rbm41	99	99.440	Mus_caroli
MGP_PahariEiJ_G0031986	Rbm41	100	96.796	ENSMUSG00000031433	Rbm41	100	96.796	Mus_musculus
MGP_PahariEiJ_G0031986	Rbm41	100	97.254	MGP_SPRETEiJ_G0034617	Rbm41	100	97.254	Mus_spretus
MGP_PahariEiJ_G0031986	Rbm41	99	88.808	ENSMPUG00000003751	RBM41	85	88.808	Mustela_putorius_furo
MGP_PahariEiJ_G0031986	Rbm41	99	87.348	ENSMLUG00000005943	RBM41	99	87.348	Myotis_lucifugus
MGP_PahariEiJ_G0031986	Rbm41	100	88.101	ENSNGAG00000014004	Rbm41	100	88.101	Nannospalax_galili
MGP_PahariEiJ_G0031986	Rbm41	90	42.133	ENSNBRG00000014480	rbm41	94	41.162	Neolamprologus_brichardi
MGP_PahariEiJ_G0031986	Rbm41	100	87.893	ENSNLEG00000013861	RBM41	100	87.893	Nomascus_leucogenys
MGP_PahariEiJ_G0031986	Rbm41	99	63.835	ENSMEUG00000002663	RBM41	100	63.835	Notamacropus_eugenii
MGP_PahariEiJ_G0031986	Rbm41	100	86.041	ENSODEG00000010074	RBM41	100	86.041	Octodon_degus
MGP_PahariEiJ_G0031986	Rbm41	94	43.317	ENSONIG00000013260	rbm41	100	43.317	Oreochromis_niloticus
MGP_PahariEiJ_G0031986	Rbm41	99	86.437	ENSOCUG00000015937	RBM41	99	86.437	Oryctolagus_cuniculus
MGP_PahariEiJ_G0031986	Rbm41	95	41.135	ENSORLG00000015367	rbm41	99	41.371	Oryzias_latipes
MGP_PahariEiJ_G0031986	Rbm41	95	39.427	ENSORLG00020008056	rbm41	99	39.427	Oryzias_latipes_hni
MGP_PahariEiJ_G0031986	Rbm41	95	42.787	ENSORLG00015014350	rbm41	99	42.787	Oryzias_latipes_hsok
MGP_PahariEiJ_G0031986	Rbm41	94	39.394	ENSOMEG00000023816	rbm41	98	39.474	Oryzias_melastigma
MGP_PahariEiJ_G0031986	Rbm41	99	86.131	ENSOGAG00000009280	RBM41	99	86.131	Otolemur_garnettii
MGP_PahariEiJ_G0031986	Rbm41	99	87.835	ENSOARG00000018817	RBM41	94	87.835	Ovis_aries
MGP_PahariEiJ_G0031986	Rbm41	100	88.136	ENSPPAG00000000213	RBM41	100	88.136	Pan_paniscus
MGP_PahariEiJ_G0031986	Rbm41	100	87.651	ENSPPRG00000021500	RBM41	100	87.651	Panthera_pardus
MGP_PahariEiJ_G0031986	Rbm41	98	89.720	ENSPTRG00000022158	RBM41	99	89.109	Pan_troglodytes
MGP_PahariEiJ_G0031986	Rbm41	100	87.409	ENSPANG00000012935	RBM41	100	87.409	Papio_anubis
MGP_PahariEiJ_G0031986	Rbm41	95	41.781	ENSPKIG00000008793	rbm41	99	41.781	Paramormyrops_kingsleyae
MGP_PahariEiJ_G0031986	Rbm41	62	54.231	ENSPSIG00000003931	RBM41	98	54.231	Pelodiscus_sinensis
MGP_PahariEiJ_G0031986	Rbm41	99	92.890	ENSPEMG00000015991	Rbm41	99	92.890	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0031986	Rbm41	96	65.657	ENSPCIG00000007079	RBM41	100	65.657	Phascolarctos_cinereus
MGP_PahariEiJ_G0031986	Rbm41	75	46.721	ENSPFOG00000000848	rbm41	94	39.100	Poecilia_formosa
MGP_PahariEiJ_G0031986	Rbm41	66	46.721	ENSPLAG00000022761	rbm41	87	37.895	Poecilia_latipinna
MGP_PahariEiJ_G0031986	Rbm41	94	38.333	ENSPMEG00000002394	rbm41	94	38.810	Poecilia_mexicana
MGP_PahariEiJ_G0031986	Rbm41	93	39.268	ENSPREG00000013759	rbm41	93	39.036	Poecilia_reticulata
MGP_PahariEiJ_G0031986	Rbm41	100	87.893	ENSPPYG00000020609	RBM41	100	87.893	Pongo_abelii
MGP_PahariEiJ_G0031986	Rbm41	100	86.683	ENSPCAG00000003991	RBM41	100	86.683	Procavia_capensis
MGP_PahariEiJ_G0031986	Rbm41	100	86.925	ENSPCOG00000014296	RBM41	100	86.925	Propithecus_coquereli
MGP_PahariEiJ_G0031986	Rbm41	68	89.796	ENSPVAG00000001786	-	68	89.796	Pteropus_vampyrus
MGP_PahariEiJ_G0031986	Rbm41	90	42.199	ENSPNYG00000012687	rbm41	94	41.814	Pundamilia_nyererei
MGP_PahariEiJ_G0031986	Rbm41	95	40.920	ENSPNAG00000003395	rbm41	96	40.920	Pygocentrus_nattereri
MGP_PahariEiJ_G0031986	Rbm41	100	95.400	ENSRNOG00000057622	Rbm41	100	95.400	Rattus_norvegicus
MGP_PahariEiJ_G0031986	Rbm41	99	87.136	ENSRBIG00000030599	RBM41	99	88.119	Rhinopithecus_bieti
MGP_PahariEiJ_G0031986	Rbm41	99	87.136	ENSRROG00000009201	RBM41	99	88.119	Rhinopithecus_roxellana
MGP_PahariEiJ_G0031986	Rbm41	100	87.651	ENSSBOG00000030042	RBM41	100	87.651	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0031986	Rbm41	99	65.133	ENSSHAG00000002285	RBM41	100	65.133	Sarcophilus_harrisii
MGP_PahariEiJ_G0031986	Rbm41	95	40.596	ENSSFOG00015009956	rbm41	95	40.724	Scleropages_formosus
MGP_PahariEiJ_G0031986	Rbm41	93	42.892	ENSSMAG00000014485	rbm41	99	42.619	Scophthalmus_maximus
MGP_PahariEiJ_G0031986	Rbm41	94	40.793	ENSSDUG00000008808	rbm41	97	40.793	Seriola_dumerili
MGP_PahariEiJ_G0031986	Rbm41	93	41.038	ENSSLDG00000002232	rbm41	97	40.698	Seriola_lalandi_dorsalis
MGP_PahariEiJ_G0031986	Rbm41	100	84.988	ENSSARG00000004377	RBM41	100	84.988	Sorex_araneus
MGP_PahariEiJ_G0031986	Rbm41	94	54.756	ENSSPUG00000018486	RBM41	96	54.756	Sphenodon_punctatus
MGP_PahariEiJ_G0031986	Rbm41	94	42.005	ENSSPAG00000018885	rbm41	97	41.647	Stegastes_partitus
MGP_PahariEiJ_G0031986	Rbm41	100	89.474	ENSSSCG00000012556	RBM41	100	89.474	Sus_scrofa
MGP_PahariEiJ_G0031986	Rbm41	68	54.225	ENSTGUG00000006473	-	98	52.333	Taeniopygia_guttata
MGP_PahariEiJ_G0031986	Rbm41	95	40.426	ENSTRUG00000009805	rbm41	99	40.426	Takifugu_rubripes
MGP_PahariEiJ_G0031986	Rbm41	95	41.250	ENSTNIG00000004692	rbm41	96	41.191	Tetraodon_nigroviridis
MGP_PahariEiJ_G0031986	Rbm41	99	89.327	ENSUAMG00000021897	RBM41	98	89.327	Ursus_americanus
MGP_PahariEiJ_G0031986	Rbm41	100	88.136	ENSVPAG00000003647	RBM41	100	88.136	Vicugna_pacos
MGP_PahariEiJ_G0031986	Rbm41	99	88.321	ENSVVUG00000009707	RBM41	85	88.321	Vulpes_vulpes
MGP_PahariEiJ_G0031986	Rbm41	93	38.702	ENSXCOG00000018744	rbm41	94	38.028	Xiphophorus_couchianus
MGP_PahariEiJ_G0031986	Rbm41	94	37.972	ENSXMAG00000015338	rbm41	94	38.695	Xiphophorus_maculatus