EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0014739 (Gene tree)
Gene ID: -
Gene Symbol: Rrs1
Alias: 5730466A07Rik|D1Ertd701e
Full Name: ribosome biogenesis regulator 1
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Plus strand
Length: 1388 bases
Position: chr1:6803480-6804867
Accession: 1929721
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0017613	RRS1	PF04939.12	3.5e-57	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0017613	-	1388	-	MGP_SPRETEiJ_P0017613	365 (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0014739's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0014739's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0014739	Rrs1	100	90.959	ENSG00000179041	RRS1	100	90.959	Homo_sapiens
MGP_SPRETEiJ_G0014739	Rrs1	87	67.296	ENSATEG00000011743	rrs1	97	64.655	Anabas_testudineus
MGP_SPRETEiJ_G0014739	Rrs1	100	89.863	ENSANAG00000018116	RRS1	100	89.863	Aotus_nancymaae
MGP_SPRETEiJ_G0014739	Rrs1	84	65.902	ENSAMXG00000037893	rrs1	91	60.606	Astyanax_mexicanus
MGP_SPRETEiJ_G0014739	Rrs1	100	88.767	ENSBTAG00000016716	RRS1	100	88.767	Bos_taurus
MGP_SPRETEiJ_G0014739	Rrs1	70	44.528	WBGene00007617	rrbs-1	78	44.528	Caenorhabditis_elegans
MGP_SPRETEiJ_G0014739	Rrs1	100	89.863	ENSCJAG00000022034	RRS1	100	89.863	Callithrix_jacchus
MGP_SPRETEiJ_G0014739	Rrs1	100	88.767	ENSCAFG00000007313	RRS1	100	88.767	Canis_familiaris
MGP_SPRETEiJ_G0014739	Rrs1	100	88.767	ENSCAFG00020016049	-	100	88.767	Canis_lupus_dingo
MGP_SPRETEiJ_G0014739	Rrs1	100	88.767	ENSCAFG00020020365	-	100	88.767	Canis_lupus_dingo
MGP_SPRETEiJ_G0014739	Rrs1	100	89.315	ENSCHIG00000009141	RRS1	100	89.315	Capra_hircus
MGP_SPRETEiJ_G0014739	Rrs1	96	87.966	ENSCPOG00000000647	RRS1	100	88.767	Cavia_porcellus
MGP_SPRETEiJ_G0014739	Rrs1	100	89.863	ENSCCAG00000032186	RRS1	100	89.863	Cebus_capucinus
MGP_SPRETEiJ_G0014739	Rrs1	100	91.233	ENSCATG00000016944	RRS1	100	91.233	Cercocebus_atys
MGP_SPRETEiJ_G0014739	Rrs1	100	91.233	ENSCSAG00000018552	RRS1	100	91.233	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0014739	Rrs1	87	93.691	ENSCHOG00000002455	RRS1	100	90.959	Choloepus_hoffmanni
MGP_SPRETEiJ_G0014739	Rrs1	87	66.258	ENSCPBG00000021374	RRS1	96	65.192	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0014739	Rrs1	87	48.607	ENSCING00000002177	-	99	48.607	Ciona_intestinalis
MGP_SPRETEiJ_G0014739	Rrs1	87	47.692	ENSCSAVG00000011819	-	99	47.692	Ciona_savignyi
MGP_SPRETEiJ_G0014739	Rrs1	100	90.411	ENSCANG00000012718	RRS1	100	90.411	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0014739	Rrs1	100	92.877	ENSCGRG00001002391	-	100	92.877	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0014739	Rrs1	98	89.636	ENSCGRG00001015575	-	99	89.636	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0014739	Rrs1	82	56.146	ENSCSEG00000014750	rrs1	97	54.261	Cynoglossus_semilaevis
MGP_SPRETEiJ_G0014739	Rrs1	84	57.329	ENSCVAG00000017878	rrs1	99	55.172	Cyprinodon_variegatus
MGP_SPRETEiJ_G0014739	Rrs1	82	66.333	ENSDARG00000003941	rrs1	97	63.988	Danio_rerio
MGP_SPRETEiJ_G0014739	Rrs1	100	89.041	ENSDNOG00000017900	RRS1	99	89.041	Dasypus_novemcinctus
MGP_SPRETEiJ_G0014739	Rrs1	61	92.308	ENSDORG00000026331	Rrs1	100	87.361	Dipodomys_ordii
MGP_SPRETEiJ_G0014739	Rrs1	79	45.763	FBgn0052409	CG32409	95	44.412	Drosophila_melanogaster
MGP_SPRETEiJ_G0014739	Rrs1	55	84.577	ENSETEG00000000935	-	55	84.577	Echinops_telfairi
MGP_SPRETEiJ_G0014739	Rrs1	80	56.122	ENSEBUG00000013506	rrs1	96	54.861	Eptatretus_burgeri
MGP_SPRETEiJ_G0014739	Rrs1	100	90.137	ENSEASG00005001691	RRS1	100	90.137	Equus_asinus_asinus
MGP_SPRETEiJ_G0014739	Rrs1	100	83.288	ENSECAG00000004492	RRS1	100	83.288	Equus_caballus
MGP_SPRETEiJ_G0014739	Rrs1	100	89.041	ENSEEUG00000013719	RRS1	100	89.041	Erinaceus_europaeus
MGP_SPRETEiJ_G0014739	Rrs1	100	90.137	ENSFCAG00000014332	RRS1	100	90.137	Felis_catus
MGP_SPRETEiJ_G0014739	Rrs1	80	64.570	ENSGALG00000030890	RRS1	99	60.714	Gallus_gallus
MGP_SPRETEiJ_G0014739	Rrs1	86	61.905	ENSGACG00000002969	rrs1	99	59.341	Gasterosteus_aculeatus
MGP_SPRETEiJ_G0014739	Rrs1	87	65.138	ENSGAGG00000023718	RRS1	98	61.725	Gopherus_agassizii
MGP_SPRETEiJ_G0014739	Rrs1	100	91.781	ENSGGOG00000026663	RRS1	100	91.781	Gorilla_gorilla
MGP_SPRETEiJ_G0014739	Rrs1	100	88.493	ENSHGLG00000021423	RRS1	100	88.493	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0014739	Rrs1	100	88.493	ENSHGLG00100020640	RRS1	100	88.493	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0014739	Rrs1	99	61.944	ENSHCOG00000015358	rrs1	96	62.500	Hippocampus_comes
MGP_SPRETEiJ_G0014739	Rrs1	82	65.772	ENSIPUG00000014412	rrs1	99	62.428	Ictalurus_punctatus
MGP_SPRETEiJ_G0014739	Rrs1	100	92.329	ENSSTOG00000026310	RRS1	100	92.329	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0014739	Rrs1	84	90.909	ENSJJAG00000011507	-	100	88.283	Jaculus_jaculus
MGP_SPRETEiJ_G0014739	Rrs1	76	82.437	ENSJJAG00000020395	-	100	72.131	Jaculus_jaculus
MGP_SPRETEiJ_G0014739	Rrs1	82	67.110	ENSKMAG00000008238	rrs1	99	62.941	Kryptolebias_marmoratus
MGP_SPRETEiJ_G0014739	Rrs1	85	67.097	ENSLACG00000004058	RRS1	99	65.653	Latimeria_chalumnae
MGP_SPRETEiJ_G0014739	Rrs1	84	69.180	ENSLOCG00000017812	rrs1	98	66.269	Lepisosteus_oculatus
MGP_SPRETEiJ_G0014739	Rrs1	87	92.429	ENSLAFG00000015405	RRS1	99	89.041	Loxodonta_africana
MGP_SPRETEiJ_G0014739	Rrs1	100	90.685	ENSMFAG00000042747	RRS1	100	90.685	Macaca_fascicularis
MGP_SPRETEiJ_G0014739	Rrs1	100	90.685	ENSMMUG00000000886	RRS1	100	90.685	Macaca_mulatta
MGP_SPRETEiJ_G0014739	Rrs1	100	90.685	ENSMNEG00000011696	RRS1	100	90.685	Macaca_nemestrina
MGP_SPRETEiJ_G0014739	Rrs1	100	91.233	ENSMLEG00000004794	RRS1	100	91.233	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0014739	Rrs1	82	67.774	ENSMZEG00005004349	RRS1	92	65.957	Maylandia_zebra
MGP_SPRETEiJ_G0014739	Rrs1	100	93.699	ENSMAUG00000005392	Rrs1	100	93.699	Mesocricetus_auratus
MGP_SPRETEiJ_G0014739	Rrs1	98	91.341	ENSMOCG00000015862	Rrs1	91	91.341	Microtus_ochrogaster
MGP_SPRETEiJ_G0014739	Rrs1	90	78.354	ENSMODG00000024952	RRS1	99	76.139	Monodelphis_domestica
MGP_SPRETEiJ_G0014739	Rrs1	100	98.630	MGP_CAROLIEiJ_G0013936	Rrs1	100	98.630	Mus_caroli
MGP_SPRETEiJ_G0014739	Rrs1	100	99.452	ENSMUSG00000061024	Rrs1	100	99.452	Mus_musculus
MGP_SPRETEiJ_G0014739	Rrs1	100	96.164	MGP_PahariEiJ_G0023883	Rrs1	100	96.164	Mus_pahari
MGP_SPRETEiJ_G0014739	Rrs1	100	88.219	ENSMPUG00000018626	RRS1	98	88.219	Mustela_putorius_furo
MGP_SPRETEiJ_G0014739	Rrs1	100	91.781	ENSNGAG00000012904	Rrs1	100	91.781	Nannospalax_galili
MGP_SPRETEiJ_G0014739	Rrs1	88	83.591	ENSNLEG00000027730	RRS1	96	89.456	Nomascus_leucogenys
MGP_SPRETEiJ_G0014739	Rrs1	82	68.439	ENSONIG00000014187	rrs1	95	66.163	Oreochromis_niloticus
MGP_SPRETEiJ_G0014739	Rrs1	90	72.205	ENSOANG00000012348	RRS1	98	70.430	Ornithorhynchus_anatinus
MGP_SPRETEiJ_G0014739	Rrs1	90	91.743	ENSOCUG00000013490	RRS1	100	87.263	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0014739	Rrs1	86	57.143	ENSOMEG00000008525	rrs1	99	55.491	Oryzias_melastigma
MGP_SPRETEiJ_G0014739	Rrs1	100	89.589	ENSOGAG00000001085	RRS1	100	89.589	Otolemur_garnettii
MGP_SPRETEiJ_G0014739	Rrs1	100	83.562	ENSOARG00000017417	RRS1	98	83.562	Ovis_aries
MGP_SPRETEiJ_G0014739	Rrs1	100	91.233	ENSPPAG00000024378	RRS1	100	91.233	Pan_paniscus
MGP_SPRETEiJ_G0014739	Rrs1	100	89.863	ENSPPRG00000021408	RRS1	100	89.863	Panthera_pardus
MGP_SPRETEiJ_G0014739	Rrs1	100	90.959	ENSPTRG00000030988	RRS1	100	90.959	Pan_troglodytes
MGP_SPRETEiJ_G0014739	Rrs1	100	65.753	ENSPANG00000035974	RRS1	100	66.301	Papio_anubis
MGP_SPRETEiJ_G0014739	Rrs1	81	67.677	ENSPKIG00000007953	rrs1	98	63.988	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0014739	Rrs1	100	92.603	ENSPEMG00000014427	Rrs1	100	92.603	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0014739	Rrs1	82	60.067	ENSPMAG00000006513	rrs1	97	55.135	Petromyzon_marinus
MGP_SPRETEiJ_G0014739	Rrs1	84	82.468	ENSPCIG00000026695	RRS1	100	77.989	Phascolarctos_cinereus
MGP_SPRETEiJ_G0014739	Rrs1	82	69.231	ENSPFOG00000020722	rrs1	100	67.077	Poecilia_formosa
MGP_SPRETEiJ_G0014739	Rrs1	83	58.361	ENSPREG00000019960	rrs1	99	55.000	Poecilia_reticulata
MGP_SPRETEiJ_G0014739	Rrs1	81	94.276	ENSPPYG00000018637	RRS1	100	94.276	Pongo_abelii
MGP_SPRETEiJ_G0014739	Rrs1	90	90.909	ENSPCAG00000009115	RRS1	100	88.767	Procavia_capensis
MGP_SPRETEiJ_G0014739	Rrs1	80	67.123	ENSPNAG00000021707	rrs1	97	63.663	Pygocentrus_nattereri
MGP_SPRETEiJ_G0014739	Rrs1	100	95.616	ENSRNOG00000007240	Rrs1	100	95.616	Rattus_norvegicus
MGP_SPRETEiJ_G0014739	Rrs1	100	90.411	ENSRBIG00000009132	RRS1	100	90.411	Rhinopithecus_bieti
MGP_SPRETEiJ_G0014739	Rrs1	100	90.411	ENSRROG00000013472	RRS1	100	90.411	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0014739	Rrs1	100	85.753	ENSSBOG00000012639	-	100	87.123	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0014739	Rrs1	100	87.123	ENSSBOG00000011006	-	100	87.123	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0014739	Rrs1	80	55.631	ENSSFOG00015015772	rrs1	97	53.687	Scleropages_formosus
MGP_SPRETEiJ_G0014739	Rrs1	81	66.892	ENSSMAG00000015226	rrs1	98	61.905	Scophthalmus_maximus
MGP_SPRETEiJ_G0014739	Rrs1	82	85.393	ENSSARG00000006976	RRS1	82	85.393	Sorex_araneus
MGP_SPRETEiJ_G0014739	Rrs1	100	90.137	ENSSSCG00000006214	RRS1	100	90.137	Sus_scrofa
MGP_SPRETEiJ_G0014739	Rrs1	85	64.194	ENSTRUG00000008796	rrs1	94	64.331	Takifugu_rubripes
MGP_SPRETEiJ_G0014739	Rrs1	76	67.754	ENSTNIG00000004026	rrs1	99	65.689	Tetraodon_nigroviridis
MGP_SPRETEiJ_G0014739	Rrs1	100	89.863	ENSTBEG00000014752	RRS1	100	89.863	Tupaia_belangeri
MGP_SPRETEiJ_G0014739	Rrs1	100	89.863	ENSUAMG00000008502	RRS1	100	89.863	Ursus_americanus
MGP_SPRETEiJ_G0014739	Rrs1	100	89.041	ENSVVUG00000018452	RRS1	100	89.041	Vulpes_vulpes
MGP_SPRETEiJ_G0014739	Rrs1	82	68.896	ENSXCOG00000009809	rrs1	95	66.272	Xiphophorus_couchianus