EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0014861 (Gene tree)
Gene ID: -
Gene Symbol: Mrpl30
Alias: 2310001L22Rik|MRP-L28|Rpml28
Full Name: mitochondrial ribosomal protein L30
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Plus strand
Length: 14483 bases
Position: chr1:36040525-36055007
Accession: 1333820
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0018244	Ribosomal_L30	PF00327.20	1.2e-14	1	1
MGP_SPRETEiJ_P0018240	Ribosomal_L30	PF00327.20	1.9e-14	1	1
MGP_SPRETEiJ_P0018241	Ribosomal_L30	PF00327.20	1.9e-14	1	1
MGP_SPRETEiJ_P0018245	Ribosomal_L30	PF00327.20	1.9e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0018242	-	356	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0018243	-	1766	-	MGP_SPRETEiJ_P0018243	6 (aa)	-	UPI00053BD8EC
MGP_SPRETEiJ_T0018240	-	968	-	MGP_SPRETEiJ_P0018240	160 (aa)	-	-
MGP_SPRETEiJ_T0018241	-	661	-	MGP_SPRETEiJ_P0018241	160 (aa)	-	-
MGP_SPRETEiJ_T0018246	-	644	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0018244	-	500	-	MGP_SPRETEiJ_P0018244	128 (aa)	-	-
MGP_SPRETEiJ_T0018245	-	586	-	MGP_SPRETEiJ_P0018245	160 (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0014861's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0014861's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0014861	Mrpl30	100	84.375	ENSG00000185414	MRPL30	98	84.810	Homo_sapiens
MGP_SPRETEiJ_G0014861	Mrpl30	100	86.719	ENSAMEG00000013344	-	86	84.177	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0014861	Mrpl30	99	85.443	ENSANAG00000028266	-	98	85.443	Aotus_nancymaae
MGP_SPRETEiJ_G0014861	Mrpl30	95	54.918	ENSBTAG00000050222	-	95	51.948	Bos_taurus
MGP_SPRETEiJ_G0014861	Mrpl30	100	82.812	ENSBTAG00000038949	MRPL30	99	81.132	Bos_taurus
MGP_SPRETEiJ_G0014861	Mrpl30	100	86.719	ENSCJAG00000007085	-	98	87.342	Callithrix_jacchus
MGP_SPRETEiJ_G0014861	Mrpl30	100	84.375	ENSCAFG00000031628	-	98	83.544	Canis_familiaris
MGP_SPRETEiJ_G0014861	Mrpl30	100	84.375	ENSCAFG00020024965	-	98	83.544	Canis_lupus_dingo
MGP_SPRETEiJ_G0014861	Mrpl30	100	83.594	ENSCHIG00000024135	-	99	82.390	Capra_hircus
MGP_SPRETEiJ_G0014861	Mrpl30	99	70.253	ENSTSYG00000037066	-	98	70.253	Carlito_syrichta
MGP_SPRETEiJ_G0014861	Mrpl30	99	84.810	ENSTSYG00000026939	-	98	84.810	Carlito_syrichta
MGP_SPRETEiJ_G0014861	Mrpl30	100	84.496	ENSCPOG00000010716	-	100	84.516	Cavia_porcellus
MGP_SPRETEiJ_G0014861	Mrpl30	99	84.810	ENSCCAG00000034467	-	98	84.810	Cebus_capucinus
MGP_SPRETEiJ_G0014861	Mrpl30	99	80.503	ENSCCAG00000017186	-	98	80.503	Cebus_capucinus
MGP_SPRETEiJ_G0014861	Mrpl30	100	86.719	ENSCATG00000041078	-	98	87.342	Cercocebus_atys
MGP_SPRETEiJ_G0014861	Mrpl30	100	87.500	ENSCLAG00000005684	-	87	87.097	Chinchilla_lanigera
MGP_SPRETEiJ_G0014861	Mrpl30	100	85.938	ENSCSAG00000017218	-	98	85.443	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0014861	Mrpl30	100	79.688	ENSCHOG00000005804	-	93	79.747	Choloepus_hoffmanni
MGP_SPRETEiJ_G0014861	Mrpl30	100	85.156	ENSCANG00000043682	-	98	85.443	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0014861	Mrpl30	100	92.500	ENSCGRG00001006119	Mrpl30	100	92.500	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0014861	Mrpl30	100	92.500	ENSCGRG00000001910	Mrpl30	100	92.500	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0014861	Mrpl30	100	74.219	ENSDNOG00000042586	-	97	72.436	Dasypus_novemcinctus
MGP_SPRETEiJ_G0014861	Mrpl30	100	78.906	ENSDNOG00000018648	-	98	79.747	Dasypus_novemcinctus
MGP_SPRETEiJ_G0014861	Mrpl30	99	77.848	ENSDNOG00000044391	-	98	77.848	Dasypus_novemcinctus
MGP_SPRETEiJ_G0014861	Mrpl30	100	77.344	ENSDNOG00000032825	-	98	74.051	Dasypus_novemcinctus
MGP_SPRETEiJ_G0014861	Mrpl30	100	85.625	ENSDORG00000010734	Mrpl30	100	85.625	Dipodomys_ordii
MGP_SPRETEiJ_G0014861	Mrpl30	100	86.719	ENSETEG00000005006	-	93	86.076	Echinops_telfairi
MGP_SPRETEiJ_G0014861	Mrpl30	100	84.375	ENSEASG00005021843	-	61	83.439	Equus_asinus_asinus
MGP_SPRETEiJ_G0014861	Mrpl30	100	84.375	ENSECAG00000015993	-	61	83.439	Equus_caballus
MGP_SPRETEiJ_G0014861	Mrpl30	100	85.938	ENSFCAG00000024233	-	66	84.375	Felis_catus
MGP_SPRETEiJ_G0014861	Mrpl30	100	84.375	ENSFDAG00000009803	-	87	83.871	Fukomys_damarensis
MGP_SPRETEiJ_G0014861	Mrpl30	99	84.810	ENSGGOG00000041571	-	98	84.810	Gorilla_gorilla
MGP_SPRETEiJ_G0014861	Mrpl30	100	85.156	ENSHGLG00000006467	-	100	85.065	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0014861	Mrpl30	100	85.156	ENSHGLG00100016969	-	100	85.065	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0014861	Mrpl30	100	84.375	ENSJJAG00000006196	Mrpl30	99	84.375	Jaculus_jaculus
MGP_SPRETEiJ_G0014861	Mrpl30	100	85.938	ENSLAFG00000008151	-	87	82.390	Loxodonta_africana
MGP_SPRETEiJ_G0014861	Mrpl30	100	85.938	ENSMFAG00000001729	MRPL30	98	86.076	Macaca_fascicularis
MGP_SPRETEiJ_G0014861	Mrpl30	100	85.938	ENSMMUG00000038088	-	98	86.076	Macaca_mulatta
MGP_SPRETEiJ_G0014861	Mrpl30	99	70.886	ENSMNEG00000034146	-	98	70.886	Macaca_nemestrina
MGP_SPRETEiJ_G0014861	Mrpl30	100	86.719	ENSMLEG00000027758	-	98	86.709	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0014861	Mrpl30	95	73.026	ENSMAUG00000014813	-	94	73.026	Mesocricetus_auratus
MGP_SPRETEiJ_G0014861	Mrpl30	100	93.125	ENSMAUG00000017646	-	93	93.125	Mesocricetus_auratus
MGP_SPRETEiJ_G0014861	Mrpl30	100	92.969	ENSMAUG00000021333	-	93	90.625	Mesocricetus_auratus
MGP_SPRETEiJ_G0014861	Mrpl30	100	87.500	ENSMICG00000011627	-	98	87.342	Microcebus_murinus
MGP_SPRETEiJ_G0014861	Mrpl30	100	93.750	ENSMOCG00000005615	Mrpl30	100	93.750	Microtus_ochrogaster
MGP_SPRETEiJ_G0014861	Mrpl30	100	99.375	MGP_CAROLIEiJ_G0014057	Mrpl30	100	99.375	Mus_caroli
MGP_SPRETEiJ_G0014861	Mrpl30	100	98.750	ENSMUSG00000026087	Mrpl30	100	98.750	Mus_musculus
MGP_SPRETEiJ_G0014861	Mrpl30	100	99.219	MGP_PahariEiJ_G0027303	Mrpl30	100	99.219	Mus_pahari
MGP_SPRETEiJ_G0014861	Mrpl30	100	84.375	ENSMPUG00000011085	-	98	82.278	Mustela_putorius_furo
MGP_SPRETEiJ_G0014861	Mrpl30	100	83.594	ENSMLUG00000029851	-	98	81.646	Myotis_lucifugus
MGP_SPRETEiJ_G0014861	Mrpl30	100	85.938	ENSNGAG00000020323	Mrpl30	100	85.625	Nannospalax_galili
MGP_SPRETEiJ_G0014861	Mrpl30	100	85.156	ENSNLEG00000027490	-	98	86.076	Nomascus_leucogenys
MGP_SPRETEiJ_G0014861	Mrpl30	100	85.938	ENSOPRG00000007331	-	96	83.750	Ochotona_princeps
MGP_SPRETEiJ_G0014861	Mrpl30	100	83.594	ENSODEG00000006001	-	96	82.051	Octodon_degus
MGP_SPRETEiJ_G0014861	Mrpl30	100	82.031	ENSODEG00000009949	-	96	81.935	Octodon_degus
MGP_SPRETEiJ_G0014861	Mrpl30	100	82.812	ENSODEG00000019187	-	87	81.935	Octodon_degus
MGP_SPRETEiJ_G0014861	Mrpl30	100	78.125	ENSODEG00000018681	-	87	76.774	Octodon_degus
MGP_SPRETEiJ_G0014861	Mrpl30	99	85.443	ENSOCUG00000004111	-	98	85.443	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0014861	Mrpl30	99	79.528	ENSOGAG00000025954	-	99	76.730	Otolemur_garnettii
MGP_SPRETEiJ_G0014861	Mrpl30	98	75.159	ENSOGAG00000030016	-	97	75.159	Otolemur_garnettii
MGP_SPRETEiJ_G0014861	Mrpl30	100	84.375	ENSOGAG00000002241	-	94	83.439	Otolemur_garnettii
MGP_SPRETEiJ_G0014861	Mrpl30	100	83.594	ENSOARG00000013442	-	99	82.390	Ovis_aries
MGP_SPRETEiJ_G0014861	Mrpl30	99	84.810	ENSPPAG00000038932	-	98	84.810	Pan_paniscus
MGP_SPRETEiJ_G0014861	Mrpl30	100	85.938	ENSPPRG00000008888	-	98	84.810	Panthera_pardus
MGP_SPRETEiJ_G0014861	Mrpl30	100	85.938	ENSPTIG00000004998	-	98	84.810	Panthera_tigris_altaica
MGP_SPRETEiJ_G0014861	Mrpl30	99	84.810	ENSPTRG00000012275	-	98	84.810	Pan_troglodytes
MGP_SPRETEiJ_G0014861	Mrpl30	100	86.719	ENSPANG00000033489	-	98	86.709	Papio_anubis
MGP_SPRETEiJ_G0014861	Mrpl30	100	93.750	ENSPEMG00000018330	-	100	93.750	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0014861	Mrpl30	100	82.500	ENSPEMG00000007715	-	100	82.500	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0014861	Mrpl30	99	85.443	ENSPPYG00000019961	-	98	85.443	Pongo_abelii
MGP_SPRETEiJ_G0014861	Mrpl30	100	89.062	ENSPCOG00000013471	-	98	87.975	Propithecus_coquereli
MGP_SPRETEiJ_G0014861	Mrpl30	100	83.594	ENSPCOG00000000860	-	98	82.278	Propithecus_coquereli
MGP_SPRETEiJ_G0014861	Mrpl30	100	84.375	ENSPVAG00000006587	-	92	81.646	Pteropus_vampyrus
MGP_SPRETEiJ_G0014861	Mrpl30	100	98.125	ENSRNOG00000049330	Mrpl30	100	98.125	Rattus_norvegicus
MGP_SPRETEiJ_G0014861	Mrpl30	99	78.481	ENSRBIG00000041744	-	98	78.481	Rhinopithecus_bieti
MGP_SPRETEiJ_G0014861	Mrpl30	100	85.156	ENSRROG00000044692	-	98	86.076	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0014861	Mrpl30	100	86.719	ENSSBOG00000036412	-	98	87.342	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0014861	Mrpl30	87	56.835	ENSSPUG00000000679	-	66	56.835	Sphenodon_punctatus
MGP_SPRETEiJ_G0014861	Mrpl30	100	87.500	ENSSSCG00000008183	-	99	83.648	Sus_scrofa
MGP_SPRETEiJ_G0014861	Mrpl30	100	85.938	ENSTTRG00000004937	-	91	82.911	Tursiops_truncatus
MGP_SPRETEiJ_G0014861	Mrpl30	100	84.375	ENSUAMG00000015567	-	98	82.911	Ursus_americanus
MGP_SPRETEiJ_G0014861	Mrpl30	100	85.156	ENSUMAG00000008932	-	87	82.911	Ursus_maritimus