EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0015064 (Gene tree)
Gene ID: -
Gene Symbol: Pnkd
Alias: 2210013N15Rik|2810403H05Rik|Brp17
Full Name: paroxysmal nonkinesiogenic dyskinesia
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Plus strand
Length: 81146 bases
Position: chr1:73687478-73768623
Accession: 1930773
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0019277	Lactamase_B	PF00753.27	4e-10	1	1
MGP_SPRETEiJ_P0019265	Lactamase_B	PF00753.27	4.5e-10	1	1
MGP_SPRETEiJ_P0019268	Lactamase_B	PF00753.27	5.5e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0019268	-	3021	-	MGP_SPRETEiJ_P0019268	415 (aa)	-	-
MGP_SPRETEiJ_T0019278	-	3556	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0019266	-	894	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0019265	-	2931	-	MGP_SPRETEiJ_P0019265	385 (aa)	-	-
MGP_SPRETEiJ_T0019277	-	2854	-	MGP_SPRETEiJ_P0019277	360 (aa)	-	-
MGP_SPRETEiJ_T0019267	-	433	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0015064's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0015064's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_SPRETEiJ_G0015064	Pnkd	74	40.977	MGP_SPRETEiJ_G0022115	Hagh	100	43.578
MGP_SPRETEiJ_G0015064	Pnkd	63	42.544	MGP_SPRETEiJ_G0022159	Haghl	100	41.228

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0015064	Pnkd	100	96.104	ENSG00000127838	PNKD	100	96.104	Homo_sapiens
MGP_SPRETEiJ_G0015064	Pnkd	100	56.944	ENSAPOG00000019072	pnkd	97	57.593	Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0015064	Pnkd	100	95.584	ENSAMEG00000003089	PNKD	100	95.584	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0015064	Pnkd	97	54.301	ENSACIG00000015359	pnkd	96	54.301	Amphilophus_citrinellus
MGP_SPRETEiJ_G0015064	Pnkd	100	56.667	ENSAOCG00000011458	-	89	61.755	Amphiprion_ocellaris
MGP_SPRETEiJ_G0015064	Pnkd	84	58.086	ENSAOCG00000024159	pnkd	79	64.504	Amphiprion_ocellaris
MGP_SPRETEiJ_G0015064	Pnkd	100	56.667	ENSAPEG00000011710	pnkd	89	61.755	Amphiprion_percula
MGP_SPRETEiJ_G0015064	Pnkd	97	57.714	ENSATEG00000002727	pnkd	97	57.434	Anabas_testudineus
MGP_SPRETEiJ_G0015064	Pnkd	89	62.187	ENSACAG00000001617	PNKD	99	55.435	Anolis_carolinensis
MGP_SPRETEiJ_G0015064	Pnkd	100	96.623	ENSANAG00000019661	PNKD	100	96.623	Aotus_nancymaae
MGP_SPRETEiJ_G0015064	Pnkd	100	58.011	ENSACLG00000021665	pnkd	89	62.382	Astatotilapia_calliptera
MGP_SPRETEiJ_G0015064	Pnkd	100	58.172	ENSAMXG00000043305	pnkd	91	61.774	Astyanax_mexicanus
MGP_SPRETEiJ_G0015064	Pnkd	100	90.278	ENSBTAG00000003936	PNKD	100	90.278	Bos_taurus
MGP_SPRETEiJ_G0015064	Pnkd	100	96.623	ENSCJAG00000010820	PNKD	100	96.623	Callithrix_jacchus
MGP_SPRETEiJ_G0015064	Pnkd	100	93.506	ENSCAFG00000014632	PNKD	100	93.506	Canis_familiaris
MGP_SPRETEiJ_G0015064	Pnkd	100	90.000	ENSCAFG00020027093	PNKD	100	90.000	Canis_lupus_dingo
MGP_SPRETEiJ_G0015064	Pnkd	100	95.065	ENSCHIG00000002862	PNKD	100	95.065	Capra_hircus
MGP_SPRETEiJ_G0015064	Pnkd	100	96.364	ENSTSYG00000034863	PNKD	100	96.364	Carlito_syrichta
MGP_SPRETEiJ_G0015064	Pnkd	100	95.844	ENSCPOG00000020589	PNKD	100	95.844	Cavia_porcellus
MGP_SPRETEiJ_G0015064	Pnkd	100	96.364	ENSCCAG00000036713	PNKD	100	96.364	Cebus_capucinus
MGP_SPRETEiJ_G0015064	Pnkd	100	96.364	ENSCATG00000041188	PNKD	100	96.364	Cercocebus_atys
MGP_SPRETEiJ_G0015064	Pnkd	100	96.623	ENSCLAG00000012048	PNKD	100	96.623	Chinchilla_lanigera
MGP_SPRETEiJ_G0015064	Pnkd	100	96.364	ENSCSAG00000008892	PNKD	100	96.364	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0015064	Pnkd	100	96.364	ENSCANG00000032283	PNKD	100	96.364	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0015064	Pnkd	100	98.442	ENSCGRG00001024071	Pnkd	100	98.442	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0015064	Pnkd	100	96.944	ENSCGRG00000005443	Pnkd	100	96.944	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0015064	Pnkd	100	55.402	ENSCSEG00000013958	pnkd	91	59.077	Cynoglossus_semilaevis
MGP_SPRETEiJ_G0015064	Pnkd	89	62.069	ENSCVAG00000005723	pnkd	89	62.069	Cyprinodon_variegatus
MGP_SPRETEiJ_G0015064	Pnkd	100	55.956	ENSDARG00000071032	pnkd	89	61.250	Danio_rerio
MGP_SPRETEiJ_G0015064	Pnkd	99	89.694	ENSDNOG00000046154	PNKD	89	88.889	Dasypus_novemcinctus
MGP_SPRETEiJ_G0015064	Pnkd	100	96.382	ENSDORG00000016109	Pnkd	100	96.382	Dipodomys_ordii
MGP_SPRETEiJ_G0015064	Pnkd	100	65.039	ENSETEG00000014587	PNKD	100	65.039	Echinops_telfairi
MGP_SPRETEiJ_G0015064	Pnkd	85	53.595	ENSEBUG00000013857	pnkd	98	53.668	Eptatretus_burgeri
MGP_SPRETEiJ_G0015064	Pnkd	100	90.278	ENSEASG00005012391	PNKD	100	90.278	Equus_asinus_asinus
MGP_SPRETEiJ_G0015064	Pnkd	100	94.545	ENSECAG00000013322	PNKD	100	94.545	Equus_caballus
MGP_SPRETEiJ_G0015064	Pnkd	98	55.402	ENSELUG00000015007	pnkd	91	56.447	Esox_lucius
MGP_SPRETEiJ_G0015064	Pnkd	100	91.111	ENSFCAG00000002373	PNKD	100	91.111	Felis_catus
MGP_SPRETEiJ_G0015064	Pnkd	86	63.107	ENSFALG00000004028	PNKD	95	62.579	Ficedula_albicollis
MGP_SPRETEiJ_G0015064	Pnkd	100	96.623	ENSFDAG00000012326	PNKD	100	96.623	Fukomys_damarensis
MGP_SPRETEiJ_G0015064	Pnkd	89	62.069	ENSFHEG00000010999	pnkd	86	62.069	Fundulus_heteroclitus
MGP_SPRETEiJ_G0015064	Pnkd	89	61.059	ENSGMOG00000009565	pnkd	96	57.434	Gadus_morhua
MGP_SPRETEiJ_G0015064	Pnkd	86	62.701	ENSGALG00000022166	PNKD	99	62.701	Gallus_gallus
MGP_SPRETEiJ_G0015064	Pnkd	89	62.382	ENSGAFG00000013942	pnkd	80	62.382	Gambusia_affinis
MGP_SPRETEiJ_G0015064	Pnkd	99	58.146	ENSGACG00000007119	pnkd	91	61.468	Gasterosteus_aculeatus
MGP_SPRETEiJ_G0015064	Pnkd	88	61.950	ENSGAGG00000017234	PNKD	100	61.950	Gopherus_agassizii
MGP_SPRETEiJ_G0015064	Pnkd	100	96.104	ENSGGOG00000006892	PNKD	100	96.104	Gorilla_gorilla
MGP_SPRETEiJ_G0015064	Pnkd	100	58.011	ENSHBUG00000001234	pnkd	89	62.382	Haplochromis_burtoni
MGP_SPRETEiJ_G0015064	Pnkd	100	95.584	ENSHGLG00000013971	PNKD	100	95.584	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0015064	Pnkd	100	95.584	ENSHGLG00100005225	PNKD	100	95.584	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0015064	Pnkd	99	58.263	ENSHCOG00000018894	pnkd	91	60.308	Hippocampus_comes
MGP_SPRETEiJ_G0015064	Pnkd	100	59.116	ENSIPUG00000013907	pnkd	100	63.141	Ictalurus_punctatus
MGP_SPRETEiJ_G0015064	Pnkd	100	97.662	ENSSTOG00000024593	PNKD	100	97.662	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0015064	Pnkd	100	94.545	ENSJJAG00000023559	Pnkd	100	95.584	Jaculus_jaculus
MGP_SPRETEiJ_G0015064	Pnkd	89	61.442	ENSKMAG00000014879	pnkd	89	61.442	Kryptolebias_marmoratus
MGP_SPRETEiJ_G0015064	Pnkd	100	57.143	ENSLBEG00000000985	pnkd	89	61.755	Labrus_bergylta
MGP_SPRETEiJ_G0015064	Pnkd	100	57.025	ENSLOCG00000000821	pnkd	89	61.755	Lepisosteus_oculatus
MGP_SPRETEiJ_G0015064	Pnkd	100	90.802	ENSLAFG00000007427	PNKD	100	90.802	Loxodonta_africana
MGP_SPRETEiJ_G0015064	Pnkd	100	96.364	ENSMFAG00000038281	PNKD	100	96.364	Macaca_fascicularis
MGP_SPRETEiJ_G0015064	Pnkd	50	98.343	ENSMMUG00000022819	-	100	98.343	Macaca_mulatta
MGP_SPRETEiJ_G0015064	Pnkd	100	92.521	ENSMNEG00000041541	PNKD	100	96.497	Macaca_nemestrina
MGP_SPRETEiJ_G0015064	Pnkd	100	96.364	ENSMLEG00000042812	PNKD	100	96.364	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0015064	Pnkd	89	61.755	ENSMAMG00000017212	pnkd	89	61.755	Mastacembelus_armatus
MGP_SPRETEiJ_G0015064	Pnkd	82	62.712	ENSMZEG00005012514	pnkd	100	62.712	Maylandia_zebra
MGP_SPRETEiJ_G0015064	Pnkd	100	97.222	ENSMAUG00000013099	Pnkd	100	97.222	Mesocricetus_auratus
MGP_SPRETEiJ_G0015064	Pnkd	100	96.623	ENSMICG00000042547	PNKD	100	96.623	Microcebus_murinus
MGP_SPRETEiJ_G0015064	Pnkd	100	98.705	ENSMOCG00000007956	Pnkd	100	98.705	Microtus_ochrogaster
MGP_SPRETEiJ_G0015064	Pnkd	86	62.460	ENSMMOG00000005679	pnkd	99	58.501	Mola_mola
MGP_SPRETEiJ_G0015064	Pnkd	86	78.457	ENSMODG00000015497	PNKD	87	78.457	Monodelphis_domestica
MGP_SPRETEiJ_G0015064	Pnkd	95	60.870	ENSMALG00000005967	pnkd	80	63.208	Monopterus_albus
MGP_SPRETEiJ_G0015064	Pnkd	100	99.481	MGP_CAROLIEiJ_G0014258	Pnkd	100	99.481	Mus_caroli
MGP_SPRETEiJ_G0015064	Pnkd	100	99.740	ENSMUSG00000026179	Pnkd	100	99.740	Mus_musculus
MGP_SPRETEiJ_G0015064	Pnkd	100	99.740	MGP_PahariEiJ_G0027496	Pnkd	100	99.740	Mus_pahari
MGP_SPRETEiJ_G0015064	Pnkd	100	91.667	ENSMPUG00000016531	PNKD	100	91.667	Mustela_putorius_furo
MGP_SPRETEiJ_G0015064	Pnkd	85	94.444	ENSMLUG00000004125	PNKD	100	94.444	Myotis_lucifugus
MGP_SPRETEiJ_G0015064	Pnkd	100	98.442	ENSNGAG00000014980	Pnkd	100	98.442	Nannospalax_galili
MGP_SPRETEiJ_G0015064	Pnkd	86	62.662	ENSNBRG00000020031	pnkd	96	62.460	Neolamprologus_brichardi
MGP_SPRETEiJ_G0015064	Pnkd	100	72.468	ENSMEUG00000011266	PNKD	100	72.468	Notamacropus_eugenii
MGP_SPRETEiJ_G0015064	Pnkd	100	94.722	ENSODEG00000009734	PNKD	100	94.722	Octodon_degus
MGP_SPRETEiJ_G0015064	Pnkd	100	57.459	ENSONIG00000004389	pnkd	89	61.755	Oreochromis_niloticus
MGP_SPRETEiJ_G0015064	Pnkd	100	90.566	ENSOCUG00000023754	PNKD	100	90.566	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0015064	Pnkd	96	58.140	ENSORLG00000026276	pnkd	90	60.923	Oryzias_latipes
MGP_SPRETEiJ_G0015064	Pnkd	96	58.140	ENSORLG00020008373	pnkd	98	61.639	Oryzias_latipes_hni
MGP_SPRETEiJ_G0015064	Pnkd	96	58.140	ENSORLG00015005276	pnkd	89	60.436	Oryzias_latipes_hsok
MGP_SPRETEiJ_G0015064	Pnkd	98	57.910	ENSOMEG00000016106	pnkd	89	60.748	Oryzias_melastigma
MGP_SPRETEiJ_G0015064	Pnkd	85	96.405	ENSOGAG00000001792	PNKD	100	96.405	Otolemur_garnettii
MGP_SPRETEiJ_G0015064	Pnkd	100	95.325	ENSOARG00000019505	PNKD	100	95.325	Ovis_aries
MGP_SPRETEiJ_G0015064	Pnkd	100	96.104	ENSPPAG00000034969	PNKD	100	96.104	Pan_paniscus
MGP_SPRETEiJ_G0015064	Pnkd	100	91.111	ENSPPRG00000023720	PNKD	100	91.111	Panthera_pardus
MGP_SPRETEiJ_G0015064	Pnkd	100	89.091	ENSPTIG00000021040	PNKD	100	89.091	Panthera_tigris_altaica
MGP_SPRETEiJ_G0015064	Pnkd	100	95.844	ENSPTRG00000012914	PNKD	100	95.844	Pan_troglodytes
MGP_SPRETEiJ_G0015064	Pnkd	100	96.364	ENSPANG00000005752	PNKD	100	96.364	Papio_anubis
MGP_SPRETEiJ_G0015064	Pnkd	97	57.759	ENSPKIG00000011208	pnkd	100	60.063	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0015064	Pnkd	85	59.804	ENSPMGG00000005169	pnkd	100	59.804	Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0015064	Pnkd	100	98.701	ENSPEMG00000010689	Pnkd	100	98.701	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0015064	Pnkd	85	53.922	ENSPMAG00000006947	pnkd	99	53.922	Petromyzon_marinus
MGP_SPRETEiJ_G0015064	Pnkd	90	78.704	ENSPCIG00000021457	PNKD	96	72.046	Phascolarctos_cinereus
MGP_SPRETEiJ_G0015064	Pnkd	88	62.857	ENSPFOG00000010628	pnkd	95	58.309	Poecilia_formosa
MGP_SPRETEiJ_G0015064	Pnkd	62	66.071	ENSPLAG00000020583	pnkd	95	59.524	Poecilia_latipinna
MGP_SPRETEiJ_G0015064	Pnkd	72	65.251	ENSPMEG00000006542	pnkd	72	60.498	Poecilia_mexicana
MGP_SPRETEiJ_G0015064	Pnkd	88	62.222	ENSPREG00000014434	pnkd	95	57.895	Poecilia_reticulata
MGP_SPRETEiJ_G0015064	Pnkd	100	96.104	ENSPPYG00000013167	PNKD	100	96.104	Pongo_abelii
MGP_SPRETEiJ_G0015064	Pnkd	100	76.364	ENSPCAG00000003946	PNKD	100	76.364	Procavia_capensis
MGP_SPRETEiJ_G0015064	Pnkd	100	96.883	ENSPCOG00000019839	PNKD	100	96.883	Propithecus_coquereli
MGP_SPRETEiJ_G0015064	Pnkd	88	62.579	ENSPNYG00000016327	pnkd	100	62.579	Pundamilia_nyererei
MGP_SPRETEiJ_G0015064	Pnkd	100	59.003	ENSPNAG00000008655	pnkd	100	59.003	Pygocentrus_nattereri
MGP_SPRETEiJ_G0015064	Pnkd	100	98.961	ENSRNOG00000014806	Pnkd	100	98.961	Rattus_norvegicus
MGP_SPRETEiJ_G0015064	Pnkd	100	96.364	ENSRBIG00000031614	PNKD	100	96.364	Rhinopithecus_bieti
MGP_SPRETEiJ_G0015064	Pnkd	100	96.364	ENSRROG00000045542	PNKD	100	96.364	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0015064	Pnkd	100	96.104	ENSSBOG00000036000	PNKD	100	96.104	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0015064	Pnkd	88	79.128	ENSSHAG00000016339	PNKD	100	79.128	Sarcophilus_harrisii
MGP_SPRETEiJ_G0015064	Pnkd	90	62.462	ENSSFOG00015013028	pnkd	90	61.310	Scleropages_formosus
MGP_SPRETEiJ_G0015064	Pnkd	97	58.000	ENSSMAG00000006812	pnkd	89	62.069	Scophthalmus_maximus
MGP_SPRETEiJ_G0015064	Pnkd	100	56.389	ENSSDUG00000012538	pnkd	89	61.129	Seriola_dumerili
MGP_SPRETEiJ_G0015064	Pnkd	89	61.129	ENSSLDG00000021431	pnkd	86	61.129	Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0015064	Pnkd	86	49.196	ENSSPUG00000018454	PNKD	98	51.961	Sphenodon_punctatus
MGP_SPRETEiJ_G0015064	Pnkd	100	56.667	ENSSPAG00000007083	pnkd	89	61.755	Stegastes_partitus
MGP_SPRETEiJ_G0015064	Pnkd	100	95.325	ENSSSCG00000029002	PNKD	100	95.325	Sus_scrofa
MGP_SPRETEiJ_G0015064	Pnkd	89	60.188	ENSTRUG00000009399	pnkd	89	60.188	Takifugu_rubripes
MGP_SPRETEiJ_G0015064	Pnkd	100	56.944	ENSTNIG00000010992	pnkd	90	60.681	Tetraodon_nigroviridis
MGP_SPRETEiJ_G0015064	Pnkd	100	93.506	ENSTTRG00000012895	PNKD	100	93.506	Tursiops_truncatus
MGP_SPRETEiJ_G0015064	Pnkd	100	90.000	ENSUAMG00000000289	PNKD	100	90.000	Ursus_americanus
MGP_SPRETEiJ_G0015064	Pnkd	100	79.481	ENSUMAG00000019639	PNKD	100	79.481	Ursus_maritimus
MGP_SPRETEiJ_G0015064	Pnkd	100	95.584	ENSVVUG00000007348	PNKD	100	95.584	Vulpes_vulpes
MGP_SPRETEiJ_G0015064	Pnkd	86	63.666	ENSXETG00000014931	pnkd	99	63.666	Xenopus_tropicalis
MGP_SPRETEiJ_G0015064	Pnkd	86	62.987	ENSXCOG00000014370	pnkd	95	62.987	Xiphophorus_couchianus