EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
MGP_SPRETEiJ_G0015261 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Mus_spretus
Status
putative
Strand
Plus strand
Length
36022 bases
Position
chr1:93370345-93406366
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_SPRETEiJ_P0020249MMR_HSR1PF01926.239.8e-0811
MGP_SPRETEiJ_P0020253MMR_HSR1PF01926.239.8e-0811
MGP_SPRETEiJ_P0020254MMR_HSR1PF01926.231e-0711
MGP_SPRETEiJ_P0020257MMR_HSR1PF01926.231e-0711
MGP_SPRETEiJ_P0020248MMR_HSR1PF01926.231.3e-0711
MGP_SPRETEiJ_P0020247MMR_HSR1PF01926.231.4e-0711
MGP_SPRETEiJ_P0020255MMR_HSR1PF01926.231.5e-0711
MGP_SPRETEiJ_P0020256MMR_HSR1PF01926.231.7e-0711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_SPRETEiJ_T0020249-730-MGP_SPRETEiJ_P0020249212 (aa)-UPI00021CF744
MGP_SPRETEiJ_T0020248-512-MGP_SPRETEiJ_P0020248107 (aa)-UPI00021CF743
MGP_SPRETEiJ_T0020258-466--- (aa)--
MGP_SPRETEiJ_T0020259-418-MGP_SPRETEiJ_P002025944 (aa)--
MGP_SPRETEiJ_T0020252-3308--- (aa)--
MGP_SPRETEiJ_T0020253-784-MGP_SPRETEiJ_P0020253213 (aa)-UPI0000F220B1
MGP_SPRETEiJ_T0020250-696--- (aa)--
MGP_SPRETEiJ_T0020251-424-MGP_SPRETEiJ_P002025177 (aa)-UPI0000F220B3
MGP_SPRETEiJ_T0020256-552-MGP_SPRETEiJ_P0020256177 (aa)-UPI0000F220B0
MGP_SPRETEiJ_T0020257-779-MGP_SPRETEiJ_P0020257221 (aa)-UPI0000F220B2
MGP_SPRETEiJ_T0020247-3160-MGP_SPRETEiJ_P0020247361 (aa)-UPI0000003F56
MGP_SPRETEiJ_T0020255-477-MGP_SPRETEiJ_P0020255120 (aa)-UPI0000F220B6
MGP_SPRETEiJ_T0020254-756-MGP_SPRETEiJ_P0020254221 (aa)-UPI0000F220B2
Gene Model
Click here to download MGP_SPRETEiJ_G0015261's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0015261's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_SPRETEiJ_G0015261-10041.284MGP_SPRETEiJ_G0034149Sept66942.904
MGP_SPRETEiJ_G0015261-10049.778MGP_SPRETEiJ_G0018307Sept98849.767
MGP_SPRETEiJ_G0015261-10064.486MGP_SPRETEiJ_G0021446-9260.059
MGP_SPRETEiJ_G0015261-10065.421MGP_SPRETEiJ_G0017778Sept49766.230
MGP_SPRETEiJ_G0015261-10041.284MGP_SPRETEiJ_G0028782Sept146743.144
MGP_SPRETEiJ_G0015261-10042.202MGP_SPRETEiJ_G0028421Sept116943.234
MGP_SPRETEiJ_G0015261-10048.148MGP_SPRETEiJ_G0021310Sept128143.077
MGP_SPRETEiJ_G0015261-10050.000MGP_SPRETEiJ_G0020978Sept38949.007
MGP_SPRETEiJ_G0015261-10062.037MGP_SPRETEiJ_G0033040Sept76562.887
MGP_SPRETEiJ_G0015261-10041.228MGP_SPRETEiJ_G0016151Sept106743.144
MGP_SPRETEiJ_G0015261-10060.748MGP_SPRETEiJ_G0031606Sept110064.828
MGP_SPRETEiJ_G0015261-10041.818MGP_SPRETEiJ_G0017184Sept87042.812
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
MGP_SPRETEiJ_G0015261-10094.393ENSAPOG00000001837sept29587.919Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0015261-10099.065ENSAMEG00000016539SEPT210097.765Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0015261-10094.393ENSACIG00000021718sept29092.258Amphilophus_citrinellus
MGP_SPRETEiJ_G0015261-10094.393ENSAOCG00000000954sept29491.098Amphiprion_ocellaris
MGP_SPRETEiJ_G0015261-10094.393ENSAPEG00000013904sept29388.623Amphiprion_percula
MGP_SPRETEiJ_G0015261-10094.393ENSATEG00000019489sept29989.167Anabas_testudineus
MGP_SPRETEiJ_G0015261-10098.131ENSACAG00000001408SEPT29993.889Anolis_carolinensis
MGP_SPRETEiJ_G0015261-10098.333ENSANAG00000023789SEPT29995.975Aotus_nancymaae
MGP_SPRETEiJ_G0015261-10094.393ENSACLG00000009428sept29986.275Astatotilapia_calliptera
MGP_SPRETEiJ_G0015261-10093.458ENSAMXG00000039525sept29392.169Astyanax_mexicanus
MGP_SPRETEiJ_G0015261-10098.190ENSBTAG00000002608SEPT210097.507Bos_taurus
MGP_SPRETEiJ_G0015261-10098.338ENSCJAG00000006122-9898.423Callithrix_jacchus
MGP_SPRETEiJ_G0015261-100100.000ENSCAFG00000012960SEPT210098.300Canis_familiaris
MGP_SPRETEiJ_G0015261-100100.000ENSCAFG00020025094-10096.904Canis_lupus_dingo
MGP_SPRETEiJ_G0015261-10098.190ENSCHIG00000026614SEPT210096.953Capra_hircus
MGP_SPRETEiJ_G0015261-100100.000ENSTSYG00000003579-10099.169Carlito_syrichta
MGP_SPRETEiJ_G0015261-10086.916ENSCPOG00000034399-10078.333Cavia_porcellus
MGP_SPRETEiJ_G0015261-100100.000ENSCPOG00000013687-10098.615Cavia_porcellus
MGP_SPRETEiJ_G0015261-10098.333ENSCCAG00000031252SEPT210084.211Cebus_capucinus
MGP_SPRETEiJ_G0015261-10099.167ENSCATG00000033533SEPT210098.615Cercocebus_atys
MGP_SPRETEiJ_G0015261-100100.000ENSCLAG00000002255-10098.892Chinchilla_lanigera
MGP_SPRETEiJ_G0015261-10081.667ENSCLAG00000007700-10065.097Chinchilla_lanigera
MGP_SPRETEiJ_G0015261-10085.833ENSCLAG00000003230-9871.350Chinchilla_lanigera
MGP_SPRETEiJ_G0015261-10099.167ENSCSAG00000005773SEPT210098.615Chlorocebus_sabaeus
MGP_SPRETEiJ_G0015261-10094.609ENSCHOG00000008715SEPT210094.609Choloepus_hoffmanni
MGP_SPRETEiJ_G0015261-10099.065ENSCPBG00000002410SEPT210093.646Chrysemys_picta_bellii
MGP_SPRETEiJ_G0015261-10085.981ENSCING00000008866-9980.723Ciona_intestinalis
MGP_SPRETEiJ_G0015261-10085.981ENSCSAVG00000003688-9682.746Ciona_savignyi
MGP_SPRETEiJ_G0015261-10099.167ENSCANG00000034470SEPT210096.584Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0015261-100100.000ENSCGRG00001009996-10098.615Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0015261-100100.000ENSCGRG00000014494-10098.305Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0015261-10094.393ENSCSEG00000017561sept29588.889Cynoglossus_semilaevis
MGP_SPRETEiJ_G0015261-10090.654ENSCVAG00000008351sept28990.034Cyprinodon_variegatus
MGP_SPRETEiJ_G0015261-10094.393ENSDARG00000027590sept29588.252Danio_rerio
MGP_SPRETEiJ_G0015261-10099.167ENSDNOG00000013772SEPT210097.507Dasypus_novemcinctus
MGP_SPRETEiJ_G0015261-100100.000ENSDORG00000000106-10099.446Dipodomys_ordii
MGP_SPRETEiJ_G0015261-9498.230ENSETEG00000001868-7698.230Echinops_telfairi
MGP_SPRETEiJ_G0015261-10087.850ENSEBUG00000006082sept27582.184Eptatretus_burgeri
MGP_SPRETEiJ_G0015261-10073.832ENSEBUG00000009786-9663.284Eptatretus_burgeri
MGP_SPRETEiJ_G0015261-100100.000ENSEASG00005008254SEPT210098.338Equus_asinus_asinus
MGP_SPRETEiJ_G0015261-100100.000ENSECAG00000017553SEPT210098.338Equus_caballus
MGP_SPRETEiJ_G0015261-10094.393ENSELUG00000018507sept29588.623Esox_lucius
MGP_SPRETEiJ_G0015261-10099.167ENSFCAG00000002797SEPT29897.507Felis_catus
MGP_SPRETEiJ_G0015261-10099.065ENSFALG00000003429SEPT210095.028Ficedula_albicollis
MGP_SPRETEiJ_G0015261-100100.000ENSFDAG00000005819SEPT210098.892Fukomys_damarensis
MGP_SPRETEiJ_G0015261-10093.458ENSFHEG00000017419sept29586.982Fundulus_heteroclitus
MGP_SPRETEiJ_G0015261-10095.327ENSGMOG00000017631sept28691.940Gadus_morhua
MGP_SPRETEiJ_G0015261-100100.000ENSGALG00000005809SEPT29995.278Gallus_gallus
MGP_SPRETEiJ_G0015261-10093.458ENSGAFG00000018172sept29986.275Gambusia_affinis
MGP_SPRETEiJ_G0015261-10094.393ENSGACG00000015721sept29390.208Gasterosteus_aculeatus
MGP_SPRETEiJ_G0015261-10099.065ENSGAGG00000004594SEPT210094.199Gopherus_agassizii
MGP_SPRETEiJ_G0015261-10099.167ENSGGOG00000004597SEPT210098.615Gorilla_gorilla
MGP_SPRETEiJ_G0015261-10094.393ENSHBUG00000007012sept29985.255Haplochromis_burtoni
MGP_SPRETEiJ_G0015261-10097.196ENSHGLG00000014923-10087.535Heterocephalus_glaber_female
MGP_SPRETEiJ_G0015261-100100.000ENSHGLG00000005291SEPT210098.892Heterocephalus_glaber_female
MGP_SPRETEiJ_G0015261-10097.196ENSHGLG00100001715-10087.535Heterocephalus_glaber_male
MGP_SPRETEiJ_G0015261-100100.000ENSHGLG00100018899SEPT210098.892Heterocephalus_glaber_male
MGP_SPRETEiJ_G0015261-10094.393ENSIPUG00000017270sept210088.251Ictalurus_punctatus
MGP_SPRETEiJ_G0015261-100100.000ENSSTOG00000013357SEPT210099.162Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0015261-10099.167ENSJJAG00000019868-10098.615Jaculus_jaculus
MGP_SPRETEiJ_G0015261-10094.393ENSKMAG00000002786sept29890.000Kryptolebias_marmoratus
MGP_SPRETEiJ_G0015261-10094.393ENSLBEG00000007372sept29588.959Labrus_bergylta
MGP_SPRETEiJ_G0015261-10094.393ENSLOCG00000006303sept29586.158Lepisosteus_oculatus
MGP_SPRETEiJ_G0015261-10099.095ENSLAFG00000011964-10097.784Loxodonta_africana
MGP_SPRETEiJ_G0015261-10098.131ENSLAFG00000030960-10096.122Loxodonta_africana
MGP_SPRETEiJ_G0015261-10099.167ENSMFAG00000039700SEPT210098.615Macaca_fascicularis
MGP_SPRETEiJ_G0015261-10099.167ENSMMUG00000004736SEPT210098.615Macaca_mulatta
MGP_SPRETEiJ_G0015261-10099.167ENSMNEG00000004313SEPT210098.615Macaca_nemestrina
MGP_SPRETEiJ_G0015261-10099.167ENSMLEG00000043469SEPT210098.615Mandrillus_leucophaeus
MGP_SPRETEiJ_G0015261-10094.393ENSMAMG00000004271sept29490.801Mastacembelus_armatus
MGP_SPRETEiJ_G0015261-10094.393ENSMZEG00005005022sept29988.611Maylandia_zebra
MGP_SPRETEiJ_G0015261-100100.000ENSMGAG00000003759SEPT29994.972Meleagris_gallopavo
MGP_SPRETEiJ_G0015261-100100.000ENSMAUG00000011950-10098.045Mesocricetus_auratus
MGP_SPRETEiJ_G0015261-100100.000ENSMICG00000000909SEPT210098.615Microcebus_murinus
MGP_SPRETEiJ_G0015261-100100.000ENSMOCG00000014906-10099.169Microtus_ochrogaster
MGP_SPRETEiJ_G0015261-10095.327ENSMMOG00000018068sept29588.166Mola_mola
MGP_SPRETEiJ_G0015261-10099.065ENSMODG00000016041SEPT29796.591Monodelphis_domestica
MGP_SPRETEiJ_G0015261-10094.393ENSMALG00000002736sept29890.057Monopterus_albus
MGP_SPRETEiJ_G0015261-100100.000MGP_CAROLIEiJ_G0014457-100100.000Mus_caroli
MGP_SPRETEiJ_G0015261-100100.000ENSMUSG00000026276Sept2100100.000Mus_musculus
MGP_SPRETEiJ_G0015261-100100.000ENSMUSG00000116048Sept2100100.000Mus_musculus
MGP_SPRETEiJ_G0015261-100100.000MGP_PahariEiJ_G0027693-100100.000Mus_pahari
MGP_SPRETEiJ_G0015261-100100.000ENSMPUG00000000166SEPT210098.338Mustela_putorius_furo
MGP_SPRETEiJ_G0015261-10099.065ENSMLUG00000007108SEPT210097.486Myotis_lucifugus
MGP_SPRETEiJ_G0015261-100100.000ENSNGAG00000022412-10098.892Nannospalax_galili
MGP_SPRETEiJ_G0015261-10094.393ENSNBRG00000003359sept29988.611Neolamprologus_brichardi
MGP_SPRETEiJ_G0015261-10099.167ENSNLEG00000013873SEPT210098.615Nomascus_leucogenys
MGP_SPRETEiJ_G0015261-9699.029ENSMEUG00000016519-9790.228Notamacropus_eugenii
MGP_SPRETEiJ_G0015261-9689.320ENSMEUG00000007833-10090.780Notamacropus_eugenii
MGP_SPRETEiJ_G0015261-10096.070ENSOPRG00000013796SEPT210095.664Ochotona_princeps
MGP_SPRETEiJ_G0015261-100100.000ENSODEG00000010316-10098.754Octodon_degus
MGP_SPRETEiJ_G0015261-10099.065ENSODEG00000019855-10097.521Octodon_degus
MGP_SPRETEiJ_G0015261-10099.065ENSODEG00000018677-10098.131Octodon_degus
MGP_SPRETEiJ_G0015261-10094.393ENSONIG00000010605sept29988.611Oreochromis_niloticus
MGP_SPRETEiJ_G0015261-10099.065ENSOANG00000011758-10095.845Ornithorhynchus_anatinus
MGP_SPRETEiJ_G0015261-100100.000ENSOCUG00000015500SEPT210097.784Oryctolagus_cuniculus
MGP_SPRETEiJ_G0015261-10094.393ENSORLG00000004835sept29792.236Oryzias_latipes
MGP_SPRETEiJ_G0015261-10094.393ENSORLG00020003263sept29687.429Oryzias_latipes_hni
MGP_SPRETEiJ_G0015261-10094.393ENSORLG00015006412sept29687.429Oryzias_latipes_hsok
MGP_SPRETEiJ_G0015261-10094.393ENSOMEG00000008923sept29591.098Oryzias_melastigma
MGP_SPRETEiJ_G0015261-100100.000ENSOGAG00000004457SEPT210097.784Otolemur_garnettii
MGP_SPRETEiJ_G0015261-10097.196ENSOARG00000017810-9986.944Ovis_aries
MGP_SPRETEiJ_G0015261-10099.167ENSPPAG00000034127SEPT210098.615Pan_paniscus
MGP_SPRETEiJ_G0015261-10099.167ENSPPRG00000012154SEPT210097.230Panthera_pardus
MGP_SPRETEiJ_G0015261-10099.167ENSPTIG00000004202SEPT210097.230Panthera_tigris_altaica
MGP_SPRETEiJ_G0015261-10099.167ENSPTRG00000023481SEPT210095.957Pan_troglodytes
MGP_SPRETEiJ_G0015261-10099.167ENSPANG00000007917SEPT210098.615Papio_anubis
MGP_SPRETEiJ_G0015261-10094.393ENSPKIG00000002533sept210086.567Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0015261-10098.131ENSPSIG00000009642SEPT210094.199Pelodiscus_sinensis
MGP_SPRETEiJ_G0015261-10094.393ENSPMGG00000012338sept29290.057Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0015261-100100.000ENSPEMG00000022937-10099.169Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0015261-10099.065ENSPCIG00000005866SEPT29996.375Phascolarctos_cinereus
MGP_SPRETEiJ_G0015261-10093.458ENSPFOG00000017007sept29988.333Poecilia_formosa
MGP_SPRETEiJ_G0015261-10093.458ENSPLAG00000003540sept29984.987Poecilia_latipinna
MGP_SPRETEiJ_G0015261-10093.458ENSPMEG00000003785sept29984.987Poecilia_mexicana
MGP_SPRETEiJ_G0015261-10093.458ENSPREG00000007538sept210086.217Poecilia_reticulata
MGP_SPRETEiJ_G0015261-10099.167ENSPPYG00000013353SEPT210098.338Pongo_abelii
MGP_SPRETEiJ_G0015261-9697.087ENSPCAG00000003337SEPT210096.845Procavia_capensis
MGP_SPRETEiJ_G0015261-10095.405ENSPVAG00000000558SEPT210095.405Pteropus_vampyrus
MGP_SPRETEiJ_G0015261-10094.393ENSPNYG00000000783sept29988.333Pundamilia_nyererei
MGP_SPRETEiJ_G0015261-10093.458ENSPNAG00000010720sept29291.867Pygocentrus_nattereri
MGP_SPRETEiJ_G0015261-10099.548ENSRNOG00000017952Sept210098.615Rattus_norvegicus
MGP_SPRETEiJ_G0015261-10099.167ENSRBIG00000032420SEPT29198.061Rhinopithecus_bieti
MGP_SPRETEiJ_G0015261-10099.167ENSRROG00000031700SEPT210098.061Rhinopithecus_roxellana
MGP_SPRETEiJ_G0015261-10098.333ENSSBOG00000016731SEPT210098.061Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0015261-10099.065ENSSHAG00000012877SEPT29897.167Sarcophilus_harrisii
MGP_SPRETEiJ_G0015261-10094.393ENSSFOG00015018742sept29786.413Scleropages_formosus
MGP_SPRETEiJ_G0015261-10094.393ENSSMAG00000007297sept29890.286Scophthalmus_maximus
MGP_SPRETEiJ_G0015261-10094.393ENSSDUG00000011223sept29491.098Seriola_dumerili
MGP_SPRETEiJ_G0015261-10094.393ENSSLDG00000016125sept29491.098Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0015261-9299.091ENSSARG00000012133-7699.091Sorex_araneus
MGP_SPRETEiJ_G0015261-10094.393ENSSPAG00000001557sept29491.098Stegastes_partitus
MGP_SPRETEiJ_G0015261-10098.190ENSSSCG00000016370SEPT210097.507Sus_scrofa
MGP_SPRETEiJ_G0015261-10099.065ENSTGUG00000006160SEPT210094.751Taeniopygia_guttata
MGP_SPRETEiJ_G0015261-10095.327ENSTRUG00000021827sept29491.691Takifugu_rubripes
MGP_SPRETEiJ_G0015261-10095.327ENSTNIG00000007849sept29491.395Tetraodon_nigroviridis
MGP_SPRETEiJ_G0015261-100100.000ENSUAMG00000017781SEPT210097.514Ursus_americanus
MGP_SPRETEiJ_G0015261-100100.000ENSUMAG00000010525SEPT210097.784Ursus_maritimus
MGP_SPRETEiJ_G0015261-100100.000ENSVVUG00000022793-10098.061Vulpes_vulpes
MGP_SPRETEiJ_G0015261-10090.833ENSXETG00000012166sept29990.085Xenopus_tropicalis
MGP_SPRETEiJ_G0015261-9293.694ENSXCOG00000007338sept210078.453Xiphophorus_couchianus
MGP_SPRETEiJ_G0015261-10093.458ENSXMAG00000004256sept29988.333Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us