EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
MGP_SPRETEiJ_G0015350 (Gene tree)
Gene ID
-
Gene Symbol
R3hdm1
Alias
-
Full Name
R3H domain containing 1
Gene Type
protein_coding
Species
Mus_spretus
Status
putative
Strand
Plus strand
Length
136762 bases
Position
chr1:128910464-129047225
Accession
2448514
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_SPRETEiJ_P0020653R3HPF01424.224.2e-1211
MGP_SPRETEiJ_P0020659R3HPF01424.225.4e-1211
MGP_SPRETEiJ_P0020657R3HPF01424.221.3e-1111
MGP_SPRETEiJ_P0020654R3HPF01424.221.5e-1111
MGP_SPRETEiJ_P0020655R3HPF01424.223.6e-1111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_SPRETEiJ_T0020660-6496--- (aa)--
MGP_SPRETEiJ_T0020667-1588--- (aa)--
MGP_SPRETEiJ_T0020661-598--- (aa)--
MGP_SPRETEiJ_T0020662-4989--- (aa)--
MGP_SPRETEiJ_T0020666-6248--- (aa)--
MGP_SPRETEiJ_T0020663-549-MGP_SPRETEiJ_P0020663182 (aa)--
MGP_SPRETEiJ_T0020658-453-MGP_SPRETEiJ_P002065832 (aa)-UPI0004621072
MGP_SPRETEiJ_T0020659-1040-MGP_SPRETEiJ_P0020659287 (aa)-UPI0004621093
MGP_SPRETEiJ_T0020656-8207--- (aa)--
MGP_SPRETEiJ_T0020657-1661-MGP_SPRETEiJ_P0020657486 (aa)--
MGP_SPRETEiJ_T0020654-3997-MGP_SPRETEiJ_P0020654549 (aa)--
MGP_SPRETEiJ_T0020655-4795-MGP_SPRETEiJ_P00206551135 (aa)--
MGP_SPRETEiJ_T0020652-2440--- (aa)--
MGP_SPRETEiJ_T0020653-1130-MGP_SPRETEiJ_P0020653239 (aa)-UPI00005AC033
MGP_SPRETEiJ_T0020665-3706--- (aa)--
MGP_SPRETEiJ_T0020664-1155-MGP_SPRETEiJ_P0020664385 (aa)--
Gene Model
Click here to download MGP_SPRETEiJ_G0015350's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0015350's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_SPRETEiJ_G0015350R3hdm18658.219MGP_SPRETEiJ_G0033908Arpp217960.360
MGP_SPRETEiJ_G0015350R3hdm19759.149MGP_SPRETEiJ_G0016722R3hdm29657.457
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
MGP_SPRETEiJ_G0015350R3hdm110094.561ENSG00000048991R3HDM19994.700Homo_sapiens
MGP_SPRETEiJ_G0015350R3hdm110064.898ENSAPOG00000020850r3hdm19747.822Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0015350R3hdm19993.911ENSAMEG00000014886R3HDM110088.908Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0015350R3hdm19055.357ENSACIG00000018791-8157.178Amphilophus_citrinellus
MGP_SPRETEiJ_G0015350R3hdm110064.883ENSAOCG00000005192r3hdm19947.364Amphiprion_ocellaris
MGP_SPRETEiJ_G0015350R3hdm110064.490ENSAPEG00000016108r3hdm19945.471Amphiprion_percula
MGP_SPRETEiJ_G0015350R3hdm110064.344ENSATEG00000000232r3hdm19944.659Anabas_testudineus
MGP_SPRETEiJ_G0015350R3hdm110079.070ENSAPLG00000015231R3HDM110074.472Anas_platyrhynchos
MGP_SPRETEiJ_G0015350R3hdm110076.970ENSACAG00000001676R3HDM110077.320Anolis_carolinensis
MGP_SPRETEiJ_G0015350R3hdm110093.724ENSANAG00000035334R3HDM110088.039Aotus_nancymaae
MGP_SPRETEiJ_G0015350R3hdm110062.857ENSACLG00000027282r3hdm19446.949Astatotilapia_calliptera
MGP_SPRETEiJ_G0015350R3hdm110070.850ENSAMXG00000012861R3HDM110071.154Astyanax_mexicanus
MGP_SPRETEiJ_G0015350R3hdm17957.328ENSAMXG00000020587arpp218458.704Astyanax_mexicanus
MGP_SPRETEiJ_G0015350R3hdm110061.935ENSAMXG00000003536r3hdm110062.704Astyanax_mexicanus
MGP_SPRETEiJ_G0015350R3hdm110092.887ENSBTAG00000013302R3HDM110090.141Bos_taurus
MGP_SPRETEiJ_G0015350R3hdm110093.305ENSCJAG00000011718R3HDM110088.018Callithrix_jacchus
MGP_SPRETEiJ_G0015350R3hdm19993.727ENSCAFG00000005075R3HDM110088.996Canis_familiaris
MGP_SPRETEiJ_G0015350R3hdm19993.727ENSCAFG00020016119R3HDM110091.725Canis_lupus_dingo
MGP_SPRETEiJ_G0015350R3hdm19993.358ENSCHIG00000020851R3HDM110090.141Capra_hircus
MGP_SPRETEiJ_G0015350R3hdm110081.185ENSCAPG00000013043-10081.185Cavia_aperea
MGP_SPRETEiJ_G0015350R3hdm110091.289ENSCPOG00000012784R3HDM110091.772Cavia_porcellus
MGP_SPRETEiJ_G0015350R3hdm110093.004ENSCCAG00000027199R3HDM110087.940Cebus_capucinus
MGP_SPRETEiJ_G0015350R3hdm110093.724ENSCATG00000023642R3HDM110089.974Cercocebus_atys
MGP_SPRETEiJ_G0015350R3hdm110093.728ENSCLAG00000007962R3HDM110093.728Chinchilla_lanigera
MGP_SPRETEiJ_G0015350R3hdm110090.033ENSCSAG00000016356R3HDM110089.886Chlorocebus_sabaeus
MGP_SPRETEiJ_G0015350R3hdm18876.115ENSCHOG00000013638R3HDM19175.853Choloepus_hoffmanni
MGP_SPRETEiJ_G0015350R3hdm19275.737ENSCPBG00000009645R3HDM110090.775Chrysemys_picta_bellii
MGP_SPRETEiJ_G0015350R3hdm110093.724ENSCANG00000034748R3HDM110087.159Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0015350R3hdm19996.823ENSCGRG00001012357R3hdm19796.823Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0015350R3hdm110098.606ENSCGRG00000012080R3hdm110098.606Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0015350R3hdm110058.923ENSCSEG00000008944r3hdm19942.896Cynoglossus_semilaevis
MGP_SPRETEiJ_G0015350R3hdm110064.082ENSCVAG00000007582r3hdm19947.152Cyprinodon_variegatus
MGP_SPRETEiJ_G0015350R3hdm19350.554ENSDARG00000061081arpp219535.795Danio_rerio
MGP_SPRETEiJ_G0015350R3hdm19987.067ENSDNOG00000000771R3HDM110084.501Dasypus_novemcinctus
MGP_SPRETEiJ_G0015350R3hdm110096.167ENSDORG00000027689-10096.167Dipodomys_ordii
MGP_SPRETEiJ_G0015350R3hdm110086.047ENSETEG00000013606R3HDM110077.113Echinops_telfairi
MGP_SPRETEiJ_G0015350R3hdm18354.902ENSEBUG00000014746arpp219741.254Eptatretus_burgeri
MGP_SPRETEiJ_G0015350R3hdm110094.979ENSEASG00005007392R3HDM110094.581Equus_asinus_asinus
MGP_SPRETEiJ_G0015350R3hdm110095.122ENSECAG00000019114R3HDM110094.581Equus_caballus
MGP_SPRETEiJ_G0015350R3hdm110077.741ENSEEUG00000012589R3HDM18983.591Erinaceus_europaeus
MGP_SPRETEiJ_G0015350R3hdm17780.000ENSELUG00000004909R3HDM19952.936Esox_lucius
MGP_SPRETEiJ_G0015350R3hdm17769.196ENSELUG00000014413r3hdm110050.880Esox_lucius
MGP_SPRETEiJ_G0015350R3hdm110094.561ENSFCAG00000027113R3HDM110095.074Felis_catus
MGP_SPRETEiJ_G0015350R3hdm19979.963ENSFALG00000013731R3HDM19368.823Ficedula_albicollis
MGP_SPRETEiJ_G0015350R3hdm110094.077ENSFDAG00000016478R3HDM110094.077Fukomys_damarensis
MGP_SPRETEiJ_G0015350R3hdm110065.870ENSFHEG00000018713r3hdm19946.636Fundulus_heteroclitus
MGP_SPRETEiJ_G0015350R3hdm17871.353ENSGMOG00000006042-7467.174Gadus_morhua
MGP_SPRETEiJ_G0015350R3hdm110082.008ENSGALG00000012246R3HDM19985.574Gallus_gallus
MGP_SPRETEiJ_G0015350R3hdm110064.113ENSGAFG00000006203r3hdm19944.693Gambusia_affinis
MGP_SPRETEiJ_G0015350R3hdm18072.034ENSGACG00000014925r3hdm19948.282Gasterosteus_aculeatus
MGP_SPRETEiJ_G0015350R3hdm19782.759ENSGAGG00000007840R3HDM19683.042Gopherus_agassizii
MGP_SPRETEiJ_G0015350R3hdm110094.774ENSGGOG00000008156R3HDM110087.676Gorilla_gorilla
MGP_SPRETEiJ_G0015350R3hdm110062.876ENSHBUG00000015737R3HDM19058.015Haplochromis_burtoni
MGP_SPRETEiJ_G0015350R3hdm110094.077ENSHGLG00000015718R3HDM110094.077Heterocephalus_glaber_female
MGP_SPRETEiJ_G0015350R3hdm110093.728ENSHGLG00100003184-10093.728Heterocephalus_glaber_male
MGP_SPRETEiJ_G0015350R3hdm19969.492ENSHGLG00100015374-10065.903Heterocephalus_glaber_male
MGP_SPRETEiJ_G0015350R3hdm16057.241ENSHCOG00000005036-5682.500Hippocampus_comes
MGP_SPRETEiJ_G0015350R3hdm110059.751ENSHCOG00000013366r3hdm18860.000Hippocampus_comes
MGP_SPRETEiJ_G0015350R3hdm110069.355ENSIPUG00000001676R3HDM19965.476Ictalurus_punctatus
MGP_SPRETEiJ_G0015350R3hdm16957.143ENSIPUG00000020552arpp218533.642Ictalurus_punctatus
MGP_SPRETEiJ_G0015350R3hdm110063.600ENSIPUG00000013629r3hdm19569.159Ictalurus_punctatus
MGP_SPRETEiJ_G0015350R3hdm110094.774ENSSTOG00000007572R3HDM110094.774Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0015350R3hdm110095.122ENSJJAG00000018208-10095.122Jaculus_jaculus
MGP_SPRETEiJ_G0015350R3hdm15675.439ENSKMAG00000013373-8675.439Kryptolebias_marmoratus
MGP_SPRETEiJ_G0015350R3hdm110062.857ENSLBEG00000027981-9460.820Labrus_bergylta
MGP_SPRETEiJ_G0015350R3hdm110074.675ENSLACG00000005334R3HDM19971.884Latimeria_chalumnae
MGP_SPRETEiJ_G0015350R3hdm19972.697ENSLOCG00000001641r3hdm110066.178Lepisosteus_oculatus
MGP_SPRETEiJ_G0015350R3hdm19992.687ENSLAFG00000009065R3HDM110090.573Loxodonta_africana
MGP_SPRETEiJ_G0015350R3hdm110094.561ENSMFAG00000030331R3HDM110095.074Macaca_fascicularis
MGP_SPRETEiJ_G0015350R3hdm110094.561ENSMMUG00000009844R3HDM110086.591Macaca_mulatta
MGP_SPRETEiJ_G0015350R3hdm110094.561ENSMNEG00000027793R3HDM110095.074Macaca_nemestrina
MGP_SPRETEiJ_G0015350R3hdm110094.561ENSMLEG00000043189R3HDM110087.588Mandrillus_leucophaeus
MGP_SPRETEiJ_G0015350R3hdm110065.188ENSMAMG00000004532r3hdm19947.097Mastacembelus_armatus
MGP_SPRETEiJ_G0015350R3hdm110062.876ENSMZEG00005003157r3hdm19947.256Maylandia_zebra
MGP_SPRETEiJ_G0015350R3hdm110078.405ENSMGAG00000012461R3HDM110073.275Meleagris_gallopavo
MGP_SPRETEiJ_G0015350R3hdm110098.955ENSMAUG00000010315R3hdm110098.955Mesocricetus_auratus
MGP_SPRETEiJ_G0015350R3hdm110094.142ENSMICG00000005900-10087.610Microcebus_murinus
MGP_SPRETEiJ_G0015350R3hdm110093.724ENSMICG00000042655-10084.729Microcebus_murinus
MGP_SPRETEiJ_G0015350R3hdm110098.606ENSMOCG00000019833-10098.606Microtus_ochrogaster
MGP_SPRETEiJ_G0015350R3hdm110081.731ENSMODG00000000923R3HDM19778.211Monodelphis_domestica
MGP_SPRETEiJ_G0015350R3hdm110065.646ENSMALG00000009000r3hdm110045.356Monopterus_albus
MGP_SPRETEiJ_G0015350R3hdm1100100.000MGP_CAROLIEiJ_G0014543R3hdm1100100.000Mus_caroli
MGP_SPRETEiJ_G0015350R3hdm1100100.000ENSMUSG00000056211R3hdm1100100.000Mus_musculus
MGP_SPRETEiJ_G0015350R3hdm1100100.000MGP_PahariEiJ_G0027779R3hdm1100100.000Mus_pahari
MGP_SPRETEiJ_G0015350R3hdm19993.911ENSMPUG00000002412R3HDM110088.634Mustela_putorius_furo
MGP_SPRETEiJ_G0015350R3hdm19992.989ENSMLUG00000013824R3HDM110087.357Myotis_lucifugus
MGP_SPRETEiJ_G0015350R3hdm110095.470ENSNGAG00000001313-10095.470Nannospalax_galili
MGP_SPRETEiJ_G0015350R3hdm110093.724ENSNLEG00000008622R3HDM110087.588Nomascus_leucogenys
MGP_SPRETEiJ_G0015350R3hdm19474.806ENSMEUG00000011784R3HDM110068.276Notamacropus_eugenii
MGP_SPRETEiJ_G0015350R3hdm110094.774ENSODEG00000008607R3HDM110094.774Octodon_degus
MGP_SPRETEiJ_G0015350R3hdm18071.008ENSONIG00000012017r3hdm19845.789Oreochromis_niloticus
MGP_SPRETEiJ_G0015350R3hdm110085.050ENSOANG00000007987R3HDM110076.775Ornithorhynchus_anatinus
MGP_SPRETEiJ_G0015350R3hdm19993.911ENSOCUG00000017366R3HDM19887.119Oryctolagus_cuniculus
MGP_SPRETEiJ_G0015350R3hdm110065.188ENSORLG00000004297r3hdm19946.698Oryzias_latipes
MGP_SPRETEiJ_G0015350R3hdm110065.188ENSORLG00020019252-9360.526Oryzias_latipes_hni
MGP_SPRETEiJ_G0015350R3hdm110065.188ENSORLG00015017355r3hdm19946.837Oryzias_latipes_hsok
MGP_SPRETEiJ_G0015350R3hdm110063.279ENSOMEG00000003882-9458.126Oryzias_melastigma
MGP_SPRETEiJ_G0015350R3hdm19993.542ENSOGAG00000003136R3HDM110087.930Otolemur_garnettii
MGP_SPRETEiJ_G0015350R3hdm19993.358ENSOARG00000010788R3HDM110087.225Ovis_aries
MGP_SPRETEiJ_G0015350R3hdm110094.561ENSPPAG00000027858R3HDM110087.786Pan_paniscus
MGP_SPRETEiJ_G0015350R3hdm110094.561ENSPPRG00000002626R3HDM110088.722Panthera_pardus
MGP_SPRETEiJ_G0015350R3hdm110094.561ENSPTIG00000016581R3HDM110088.458Panthera_tigris_altaica
MGP_SPRETEiJ_G0015350R3hdm110094.561ENSPTRG00000012494R3HDM110086.731Pan_troglodytes
MGP_SPRETEiJ_G0015350R3hdm110094.561ENSPANG00000026448R3HDM110087.588Papio_anubis
MGP_SPRETEiJ_G0015350R3hdm19766.549ENSPKIG00000004328r3hdm19174.921Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0015350R3hdm110066.207ENSPKIG00000011224R3HDM19063.504Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0015350R3hdm110079.402ENSPSIG00000012915R3HDM110074.055Pelodiscus_sinensis
MGP_SPRETEiJ_G0015350R3hdm16878.395ENSPMGG00000011264-9153.687Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0015350R3hdm110098.606ENSPEMG00000015187R3hdm110098.606Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0015350R3hdm110090.417ENSPCIG00000002491R3HDM110089.461Phascolarctos_cinereus
MGP_SPRETEiJ_G0015350R3hdm110063.576ENSPFOG00000015036r3hdm19947.271Poecilia_formosa
MGP_SPRETEiJ_G0015350R3hdm110063.306ENSPLAG00000018042r3hdm19944.320Poecilia_latipinna
MGP_SPRETEiJ_G0015350R3hdm110063.306ENSPMEG00000023947r3hdm19944.455Poecilia_mexicana
MGP_SPRETEiJ_G0015350R3hdm110064.189ENSPREG00000007902r3hdm18862.233Poecilia_reticulata
MGP_SPRETEiJ_G0015350R3hdm110086.807ENSPPYG00000012815R3HDM110085.639Pongo_abelii
MGP_SPRETEiJ_G0015350R3hdm110086.711ENSPCAG00000006208R3HDM110076.123Procavia_capensis
MGP_SPRETEiJ_G0015350R3hdm110087.860ENSPCOG00000012698R3HDM110085.501Propithecus_coquereli
MGP_SPRETEiJ_G0015350R3hdm19988.007ENSPVAG00000006098R3HDM110078.478Pteropus_vampyrus
MGP_SPRETEiJ_G0015350R3hdm110062.876ENSPNYG00000008701-9759.569Pundamilia_nyererei
MGP_SPRETEiJ_G0015350R3hdm17581.283ENSPNAG00000005436R3HDM19975.884Pygocentrus_nattereri
MGP_SPRETEiJ_G0015350R3hdm17955.702ENSPNAG00000004162arpp215757.600Pygocentrus_nattereri
MGP_SPRETEiJ_G0015350R3hdm19363.109ENSPNAG00000013952r3hdm110063.023Pygocentrus_nattereri
MGP_SPRETEiJ_G0015350R3hdm110097.533ENSRNOG00000004099R3hdm110097.533Rattus_norvegicus
MGP_SPRETEiJ_G0015350R3hdm110086.047ENSRBIG00000033317R3HDM110097.786Rhinopithecus_bieti
MGP_SPRETEiJ_G0015350R3hdm110094.561ENSRROG00000034534R3HDM110086.895Rhinopithecus_roxellana
MGP_SPRETEiJ_G0015350R3hdm110092.469ENSSBOG00000020389R3HDM110087.852Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0015350R3hdm110090.417ENSSHAG00000016999R3HDM110079.683Sarcophilus_harrisii
MGP_SPRETEiJ_G0015350R3hdm110068.163ENSSFOG00015019851-9956.261Scleropages_formosus
MGP_SPRETEiJ_G0015350R3hdm110070.790ENSSFOG00015014134r3hdm110070.073Scleropages_formosus
MGP_SPRETEiJ_G0015350R3hdm110062.069ENSSMAG00000001669r3hdm19942.525Scophthalmus_maximus
MGP_SPRETEiJ_G0015350R3hdm110064.626ENSSDUG00000010749r3hdm19945.604Seriola_dumerili
MGP_SPRETEiJ_G0015350R3hdm110063.333ENSSLDG00000004499r3hdm19945.363Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0015350R3hdm110077.409ENSSARG00000000352-6981.728Sorex_araneus
MGP_SPRETEiJ_G0015350R3hdm19585.605ENSSPUG00000004167R3HDM110076.471Sphenodon_punctatus
MGP_SPRETEiJ_G0015350R3hdm110065.870ENSSPAG00000004648r3hdm19947.132Stegastes_partitus
MGP_SPRETEiJ_G0015350R3hdm110094.425ENSSSCG00000015692R3HDM110091.109Sus_scrofa
MGP_SPRETEiJ_G0015350R3hdm19979.412ENSTGUG00000011750R3HDM110069.939Taeniopygia_guttata
MGP_SPRETEiJ_G0015350R3hdm18960.356ENSTRUG00000011654r3hdm19346.186Takifugu_rubripes
MGP_SPRETEiJ_G0015350R3hdm18965.926ENSTNIG00000010362r3hdm19944.000Tetraodon_nigroviridis
MGP_SPRETEiJ_G0015350R3hdm19488.350ENSTTRG00000003935R3HDM110081.069Tursiops_truncatus
MGP_SPRETEiJ_G0015350R3hdm110094.979ENSUAMG00000024806R3HDM19991.328Ursus_americanus
MGP_SPRETEiJ_G0015350R3hdm110094.979ENSUMAG00000005552R3HDM110085.222Ursus_maritimus
MGP_SPRETEiJ_G0015350R3hdm18695.973ENSVPAG00000007333R3HDM19385.965Vicugna_pacos
MGP_SPRETEiJ_G0015350R3hdm110094.774ENSVVUG00000006457R3HDM110091.718Vulpes_vulpes
MGP_SPRETEiJ_G0015350R3hdm110067.774ENSXETG00000019330r3hdm110063.654Xenopus_tropicalis
MGP_SPRETEiJ_G0015350R3hdm17275.978ENSXCOG00000017448r3hdm19447.381Xiphophorus_couchianus
MGP_SPRETEiJ_G0015350R3hdm110064.548ENSXMAG00000007885r3hdm19947.173Xiphophorus_maculatus

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