EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0015499 (Gene tree)
Gene ID: -
Gene Symbol: Swt1
Alias: 1200016B10Rik
Full Name: SWT1 RNA endoribonuclease homolog (S. cerevisiae)
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Minus strand
Length: 61764 bases
Position: chr1:153007009-153068772
Accession: 1914125
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0021378	PIN_4	PF13638.6	6.8e-28	1	1
MGP_SPRETEiJ_P0021383	PIN_4	PF13638.6	1.5e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0021383	-	752	-	MGP_SPRETEiJ_P0021383	250 (aa)	-	-
MGP_SPRETEiJ_T0021382	-	522	-	MGP_SPRETEiJ_P0021382	173 (aa)	-	-
MGP_SPRETEiJ_T0021381	-	323	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0021380	-	311	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0021387	-	1426	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0021386	-	5060	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0021385	-	495	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0021384	-	2718	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0021378	-	3663	-	MGP_SPRETEiJ_P0021378	907 (aa)	-	-
MGP_SPRETEiJ_T0021379	-	2863	-	MGP_SPRETEiJ_P0021379	679 (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0015499's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0015499's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0015499	Swt1	98	70.497	ENSG00000116668	SWT1	99	69.503	Homo_sapiens
MGP_SPRETEiJ_G0015499	Swt1	73	41.530	ENSAPOG00000014897	-	59	35.163	Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0015499	Swt1	98	69.623	ENSAMEG00000013585	SWT1	99	69.290	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0015499	Swt1	73	41.530	ENSAOCG00000013932	swt1	58	35.640	Amphiprion_ocellaris
MGP_SPRETEiJ_G0015499	Swt1	73	42.077	ENSAPEG00000009613	-	58	35.640	Amphiprion_percula
MGP_SPRETEiJ_G0015499	Swt1	68	47.953	ENSATEG00000018946	swt1	58	36.271	Anabas_testudineus
MGP_SPRETEiJ_G0015499	Swt1	70	58.989	ENSAPLG00000008607	SWT1	91	51.497	Anas_platyrhynchos
MGP_SPRETEiJ_G0015499	Swt1	70	56.180	ENSACAG00000002276	SWT1	71	46.982	Anolis_carolinensis
MGP_SPRETEiJ_G0015499	Swt1	98	69.613	ENSANAG00000027068	SWT1	99	69.205	Aotus_nancymaae
MGP_SPRETEiJ_G0015499	Swt1	68	41.860	ENSACLG00000009742	swt1	75	32.532	Astatotilapia_calliptera
MGP_SPRETEiJ_G0015499	Swt1	69	46.552	ENSAMXG00000010971	swt1	59	38.265	Astyanax_mexicanus
MGP_SPRETEiJ_G0015499	Swt1	71	85.311	ENSBTAG00000004492	SWT1	99	63.596	Bos_taurus
MGP_SPRETEiJ_G0015499	Swt1	98	68.508	ENSCJAG00000005544	SWT1	99	67.991	Callithrix_jacchus
MGP_SPRETEiJ_G0015499	Swt1	99	68.954	ENSCAFG00000013543	SWT1	99	68.329	Canis_familiaris
MGP_SPRETEiJ_G0015499	Swt1	98	68.791	ENSCAFG00020015648	SWT1	99	69.811	Canis_lupus_dingo
MGP_SPRETEiJ_G0015499	Swt1	93	70.809	ENSCHIG00000023511	SWT1	99	79.661	Capra_hircus
MGP_SPRETEiJ_G0015499	Swt1	98	70.939	ENSTSYG00000010470	SWT1	99	70.055	Carlito_syrichta
MGP_SPRETEiJ_G0015499	Swt1	96	65.667	ENSCPOG00000014251	SWT1	100	67.866	Cavia_porcellus
MGP_SPRETEiJ_G0015499	Swt1	98	69.945	ENSCCAG00000033926	SWT1	99	69.536	Cebus_capucinus
MGP_SPRETEiJ_G0015499	Swt1	98	69.934	ENSCATG00000042210	SWT1	99	80.750	Cercocebus_atys
MGP_SPRETEiJ_G0015499	Swt1	92	81.215	ENSCLAG00000013959	SWT1	99	68.575	Chinchilla_lanigera
MGP_SPRETEiJ_G0015499	Swt1	98	69.824	ENSCSAG00000012895	SWT1	99	69.307	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0015499	Swt1	86	82.500	ENSCHOG00000002211	-	64	82.500	Choloepus_hoffmanni
MGP_SPRETEiJ_G0015499	Swt1	71	62.147	ENSCPBG00000015691	SWT1	76	52.814	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0015499	Swt1	98	69.945	ENSCANG00000032207	SWT1	99	81.164	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0015499	Swt1	100	88.043	ENSCGRG00001022955	Swt1	99	79.891	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0015499	Swt1	100	88.043	ENSCGRG00000010224	Swt1	99	80.089	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0015499	Swt1	88	41.150	ENSCSEG00000017352	swt1	81	34.591	Cynoglossus_semilaevis
MGP_SPRETEiJ_G0015499	Swt1	68	48.256	ENSDARG00000094010	swt1	72	35.656	Danio_rerio
MGP_SPRETEiJ_G0015499	Swt1	96	62.757	ENSDNOG00000005254	SWT1	100	64.606	Dasypus_novemcinctus
MGP_SPRETEiJ_G0015499	Swt1	98	69.697	ENSDORG00000010531	Swt1	99	69.024	Dipodomys_ordii
MGP_SPRETEiJ_G0015499	Swt1	96	67.160	ENSEASG00005005530	SWT1	98	67.389	Equus_asinus_asinus
MGP_SPRETEiJ_G0015499	Swt1	90	70.156	ENSECAG00000012085	SWT1	98	69.073	Equus_caballus
MGP_SPRETEiJ_G0015499	Swt1	83	84.524	ENSEEUG00000003664	SWT1	87	84.524	Erinaceus_europaeus
MGP_SPRETEiJ_G0015499	Swt1	90	43.172	ENSELUG00000020565	swt1	57	37.521	Esox_lucius
MGP_SPRETEiJ_G0015499	Swt1	98	69.767	ENSFCAG00000011286	SWT1	99	68.660	Felis_catus
MGP_SPRETEiJ_G0015499	Swt1	66	61.905	ENSFALG00000003206	SWT1	69	50.479	Ficedula_albicollis
MGP_SPRETEiJ_G0015499	Swt1	98	69.832	ENSFDAG00000007569	SWT1	99	69.385	Fukomys_damarensis
MGP_SPRETEiJ_G0015499	Swt1	65	61.728	ENSGALG00000034230	SWT1	76	48.968	Gallus_gallus
MGP_SPRETEiJ_G0015499	Swt1	67	44.509	ENSGAFG00000007803	-	62	34.249	Gambusia_affinis
MGP_SPRETEiJ_G0015499	Swt1	71	62.011	ENSGAGG00000025050	SWT1	99	57.732	Gopherus_agassizii
MGP_SPRETEiJ_G0015499	Swt1	58	81.226	ENSGGOG00000041167	-	95	81.226	Gorilla_gorilla
MGP_SPRETEiJ_G0015499	Swt1	68	41.860	ENSHBUG00000006188	swt1	74	32.453	Haplochromis_burtoni
MGP_SPRETEiJ_G0015499	Swt1	97	69.718	ENSHGLG00000006542	SWT1	99	69.300	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0015499	Swt1	92	82.564	ENSHGLG00100014408	SWT1	99	70.316	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0015499	Swt1	69	47.701	ENSIPUG00000009113	-	58	37.197	Ictalurus_punctatus
MGP_SPRETEiJ_G0015499	Swt1	98	71.763	ENSSTOG00000010356	SWT1	99	71.317	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0015499	Swt1	91	82.184	ENSJJAG00000015927	Swt1	99	68.315	Jaculus_jaculus
MGP_SPRETEiJ_G0015499	Swt1	68	42.353	ENSKMAG00000012533	swt1	59	35.544	Kryptolebias_marmoratus
MGP_SPRETEiJ_G0015499	Swt1	62	46.497	ENSLBEG00000020663	-	57	36.953	Labrus_bergylta
MGP_SPRETEiJ_G0015499	Swt1	70	56.000	ENSLACG00000009194	SWT1	99	45.519	Latimeria_chalumnae
MGP_SPRETEiJ_G0015499	Swt1	69	49.711	ENSLOCG00000001749	swt1	97	42.724	Lepisosteus_oculatus
MGP_SPRETEiJ_G0015499	Swt1	70	82.584	ENSLAFG00000004346	-	99	81.090	Loxodonta_africana
MGP_SPRETEiJ_G0015499	Swt1	98	69.714	ENSMFAG00000031793	SWT1	99	80.513	Macaca_fascicularis
MGP_SPRETEiJ_G0015499	Swt1	98	67.432	ENSMMUG00000013882	SWT1	99	77.835	Macaca_mulatta
MGP_SPRETEiJ_G0015499	Swt1	98	69.934	ENSMNEG00000035502	SWT1	99	80.684	Macaca_nemestrina
MGP_SPRETEiJ_G0015499	Swt1	98	70.387	ENSMLEG00000038692	SWT1	99	80.920	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0015499	Swt1	68	41.860	ENSMZEG00005018489	swt1	74	32.453	Maylandia_zebra
MGP_SPRETEiJ_G0015499	Swt1	65	60.976	ENSMGAG00000000973	SWT1	100	52.508	Meleagris_gallopavo
MGP_SPRETEiJ_G0015499	Swt1	100	90.395	ENSMAUG00000007996	Swt1	99	73.908	Mesocricetus_auratus
MGP_SPRETEiJ_G0015499	Swt1	97	72.204	ENSMICG00000014975	SWT1	99	71.207	Microcebus_murinus
MGP_SPRETEiJ_G0015499	Swt1	100	88.043	ENSMOCG00000009776	Swt1	99	81.298	Microtus_ochrogaster
MGP_SPRETEiJ_G0015499	Swt1	97	57.174	ENSMODG00000007472	SWT1	99	56.087	Monodelphis_domestica
MGP_SPRETEiJ_G0015499	Swt1	72	45.902	ENSMALG00000019308	swt1	64	34.591	Monopterus_albus
MGP_SPRETEiJ_G0015499	Swt1	100	97.200	MGP_CAROLIEiJ_G0014692	Swt1	100	98.870	Mus_caroli
MGP_SPRETEiJ_G0015499	Swt1	100	98.630	ENSMUSG00000052748	Swt1	100	98.456	Mus_musculus
MGP_SPRETEiJ_G0015499	Swt1	100	92.400	MGP_PahariEiJ_G0027928	Swt1	100	95.480	Mus_pahari
MGP_SPRETEiJ_G0015499	Swt1	98	69.401	ENSMPUG00000011913	SWT1	99	68.514	Mustela_putorius_furo
MGP_SPRETEiJ_G0015499	Swt1	94	77.436	ENSMLUG00000001142	SWT1	99	66.885	Myotis_lucifugus
MGP_SPRETEiJ_G0015499	Swt1	94	93.252	ENSNGAG00000021080	Swt1	99	76.923	Nannospalax_galili
MGP_SPRETEiJ_G0015499	Swt1	98	70.575	ENSNLEG00000018031	SWT1	99	70.276	Nomascus_leucogenys
MGP_SPRETEiJ_G0015499	Swt1	98	44.641	ENSMEUG00000000236	-	99	43.867	Notamacropus_eugenii
MGP_SPRETEiJ_G0015499	Swt1	87	66.430	ENSOPRG00000000692	SWT1	89	66.430	Ochotona_princeps
MGP_SPRETEiJ_G0015499	Swt1	70	42.373	ENSONIG00000009994	swt1	100	36.577	Oreochromis_niloticus
MGP_SPRETEiJ_G0015499	Swt1	71	75.843	ENSOANG00000001013	-	96	57.548	Ornithorhynchus_anatinus
MGP_SPRETEiJ_G0015499	Swt1	98	63.355	ENSOCUG00000004901	SWT1	100	63.355	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0015499	Swt1	62	45.860	ENSORLG00000009682	swt1	58	35.000	Oryzias_latipes
MGP_SPRETEiJ_G0015499	Swt1	62	45.860	ENSORLG00020011654	swt1	59	35.172	Oryzias_latipes_hni
MGP_SPRETEiJ_G0015499	Swt1	62	46.497	ENSORLG00015007734	swt1	59	35.000	Oryzias_latipes_hsok
MGP_SPRETEiJ_G0015499	Swt1	66	43.114	ENSOMEG00000006607	swt1	57	35.345	Oryzias_melastigma
MGP_SPRETEiJ_G0015499	Swt1	92	85.311	ENSOGAG00000016195	SWT1	99	68.619	Otolemur_garnettii
MGP_SPRETEiJ_G0015499	Swt1	99	68.845	ENSOARG00000004156	SWT1	99	67.974	Ovis_aries
MGP_SPRETEiJ_G0015499	Swt1	98	70.497	ENSPPAG00000021400	SWT1	99	69.613	Pan_paniscus
MGP_SPRETEiJ_G0015499	Swt1	98	69.657	ENSPPRG00000023754	SWT1	99	68.882	Panthera_pardus
MGP_SPRETEiJ_G0015499	Swt1	98	69.546	ENSPTIG00000021889	SWT1	99	68.771	Panthera_tigris_altaica
MGP_SPRETEiJ_G0015499	Swt1	98	70.497	ENSPTRG00000001777	SWT1	99	69.392	Pan_troglodytes
MGP_SPRETEiJ_G0015499	Swt1	98	69.460	ENSPANG00000005099	SWT1	99	80.239	Papio_anubis
MGP_SPRETEiJ_G0015499	Swt1	66	45.833	ENSPKIG00000005979	swt1	58	36.300	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0015499	Swt1	71	60.335	ENSPSIG00000008961	SWT1	75	52.168	Pelodiscus_sinensis
MGP_SPRETEiJ_G0015499	Swt1	66	46.429	ENSPMGG00000000152	-	54	40.526	Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0015499	Swt1	100	83.562	ENSPEMG00000008208	Swt1	99	82.288	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0015499	Swt1	98	56.064	ENSPCIG00000002443	SWT1	99	73.846	Phascolarctos_cinereus
MGP_SPRETEiJ_G0015499	Swt1	79	41.000	ENSPFOG00000010988	-	69	34.609	Poecilia_formosa
MGP_SPRETEiJ_G0015499	Swt1	79	41.000	ENSPLAG00000022908	-	59	34.471	Poecilia_latipinna
MGP_SPRETEiJ_G0015499	Swt1	79	41.000	ENSPMEG00000006943	-	59	34.300	Poecilia_mexicana
MGP_SPRETEiJ_G0015499	Swt1	98	69.834	ENSPPYG00000000415	SWT1	99	69.205	Pongo_abelii
MGP_SPRETEiJ_G0015499	Swt1	98	57.901	ENSPCAG00000008337	SWT1	100	57.522	Procavia_capensis
MGP_SPRETEiJ_G0015499	Swt1	67	81.319	ENSPCOG00000018195	-	93	81.319	Propithecus_coquereli
MGP_SPRETEiJ_G0015499	Swt1	78	70.522	ENSPVAG00000005968	SWT1	79	70.621	Pteropus_vampyrus
MGP_SPRETEiJ_G0015499	Swt1	68	41.860	ENSPNYG00000012934	swt1	74	32.453	Pundamilia_nyererei
MGP_SPRETEiJ_G0015499	Swt1	66	47.879	ENSPNAG00000017795	swt1	58	38.045	Pygocentrus_nattereri
MGP_SPRETEiJ_G0015499	Swt1	100	89.041	ENSRNOG00000032258	Swt1	99	87.473	Rattus_norvegicus
MGP_SPRETEiJ_G0015499	Swt1	98	67.699	ENSRBIG00000040630	SWT1	99	78.253	Rhinopithecus_bieti
MGP_SPRETEiJ_G0015499	Swt1	84	70.335	ENSRROG00000028596	SWT1	100	64.623	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0015499	Swt1	98	70.342	ENSSBOG00000028825	SWT1	99	69.350	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0015499	Swt1	98	57.004	ENSSHAG00000009241	SWT1	99	56.742	Sarcophilus_harrisii
MGP_SPRETEiJ_G0015499	Swt1	65	50.000	ENSSFOG00015004895	swt1	57	39.895	Scleropages_formosus
MGP_SPRETEiJ_G0015499	Swt1	64	46.875	ENSSDUG00000012345	swt1	58	36.130	Seriola_dumerili
MGP_SPRETEiJ_G0015499	Swt1	64	46.875	ENSSLDG00000003821	swt1	58	35.517	Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0015499	Swt1	70	81.143	ENSSARG00000011524	-	89	76.891	Sorex_araneus
MGP_SPRETEiJ_G0015499	Swt1	70	57.955	ENSSPUG00000003899	SWT1	79	50.209	Sphenodon_punctatus
MGP_SPRETEiJ_G0015499	Swt1	64	43.750	ENSSPAG00000001030	swt1	58	35.121	Stegastes_partitus
MGP_SPRETEiJ_G0015499	Swt1	99	66.935	ENSSSCG00000015569	SWT1	99	70.477	Sus_scrofa
MGP_SPRETEiJ_G0015499	Swt1	63	62.420	ENSTGUG00000003718	-	100	54.301	Taeniopygia_guttata
MGP_SPRETEiJ_G0015499	Swt1	70	42.614	ENSTRUG00000006420	swt1	70	34.024	Takifugu_rubripes
MGP_SPRETEiJ_G0015499	Swt1	57	82.258	ENSTBEG00000016891	-	54	82.258	Tupaia_belangeri
MGP_SPRETEiJ_G0015499	Swt1	98	67.845	ENSTTRG00000005914	SWT1	99	66.851	Tursiops_truncatus
MGP_SPRETEiJ_G0015499	Swt1	98	68.590	ENSUAMG00000020937	SWT1	98	71.620	Ursus_americanus
MGP_SPRETEiJ_G0015499	Swt1	98	68.625	ENSUMAG00000021918	SWT1	99	68.625	Ursus_maritimus
MGP_SPRETEiJ_G0015499	Swt1	90	79.621	ENSVPAG00000011855	SWT1	92	79.621	Vicugna_pacos
MGP_SPRETEiJ_G0015499	Swt1	98	69.324	ENSVVUG00000009182	SWT1	99	68.882	Vulpes_vulpes
MGP_SPRETEiJ_G0015499	Swt1	71	45.810	ENSXMAG00000023472	-	62	34.903	Xiphophorus_maculatus