EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0015508 (Gene tree)
Gene ID: -
Gene Symbol: Apobec4
Alias: 4933431M11Rik
Full Name: apolipoprotein B mRNA editing enzyme%2C catalytic polypeptide-like 4 (putative)
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Plus strand
Length: 6911 bases
Position: chr1:154432561-154439471
Accession: 1918531
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0021431	APOBEC_N	PF08210.11	1.7e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0021431	-	1575	-	MGP_SPRETEiJ_P0021431	369 (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0015508's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0015508's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0015508	Apobec4	94	61.389	ENSG00000173627	APOBEC4	100	60.870	Homo_sapiens
MGP_SPRETEiJ_G0015508	Apobec4	94	64.444	ENSAMEG00000002503	APOBEC4	99	62.565	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0015508	Apobec4	91	48.580	ENSACAG00000015192	APOBEC4	98	48.580	Anolis_carolinensis
MGP_SPRETEiJ_G0015508	Apobec4	92	61.690	ENSBTAG00000047395	APOBEC4	99	60.490	Bos_taurus
MGP_SPRETEiJ_G0015508	Apobec4	94	60.556	ENSCJAG00000040026	APOBEC4	100	60.270	Callithrix_jacchus
MGP_SPRETEiJ_G0015508	Apobec4	94	61.944	ENSCAFG00000013349	APOBEC4	100	61.413	Canis_familiaris
MGP_SPRETEiJ_G0015508	Apobec4	94	61.944	ENSCAFG00020015526	APOBEC4	100	61.413	Canis_lupus_dingo
MGP_SPRETEiJ_G0015508	Apobec4	92	61.782	ENSCHIG00000011987	APOBEC4	96	60.440	Capra_hircus
MGP_SPRETEiJ_G0015508	Apobec4	94	60.563	ENSCSAG00000000243	APOBEC4	100	59.615	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0015508	Apobec4	96	60.054	ENSCHOG00000012387	APOBEC4	100	60.054	Choloepus_hoffmanni
MGP_SPRETEiJ_G0015508	Apobec4	95	46.594	ENSCPBG00000015714	APOBEC4	97	46.594	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0015508	Apobec4	89	69.760	ENSCGRG00001004553	Apobec4	96	69.760	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0015508	Apobec4	92	62.535	ENSDNOG00000044664	APOBEC4	99	61.096	Dasypus_novemcinctus
MGP_SPRETEiJ_G0015508	Apobec4	94	58.807	ENSDORG00000007335	Apobec4	99	58.807	Dipodomys_ordii
MGP_SPRETEiJ_G0015508	Apobec4	94	63.333	ENSEASG00005006513	APOBEC4	99	62.331	Equus_asinus_asinus
MGP_SPRETEiJ_G0015508	Apobec4	94	63.611	ENSECAG00000019734	APOBEC4	99	62.602	Equus_caballus
MGP_SPRETEiJ_G0015508	Apobec4	94	63.056	ENSFCAG00000010909	APOBEC4	100	62.060	Felis_catus
MGP_SPRETEiJ_G0015508	Apobec4	81	65.495	ENSFDAG00000018185	APOBEC4	98	65.495	Fukomys_damarensis
MGP_SPRETEiJ_G0015508	Apobec4	83	47.546	ENSGALG00000053078	APOBEC4	92	47.546	Gallus_gallus
MGP_SPRETEiJ_G0015508	Apobec4	94	61.111	ENSGGOG00000042217	APOBEC4	100	60.163	Gorilla_gorilla
MGP_SPRETEiJ_G0015508	Apobec4	95	43.597	ENSLACG00000014504	APOBEC4	99	43.597	Latimeria_chalumnae
MGP_SPRETEiJ_G0015508	Apobec4	94	61.127	ENSMMUG00000031303	APOBEC4	100	60.165	Macaca_mulatta
MGP_SPRETEiJ_G0015508	Apobec4	83	45.171	ENSMGAG00000017190	APOBEC4	94	45.171	Meleagris_gallopavo
MGP_SPRETEiJ_G0015508	Apobec4	100	94.652	MGP_CAROLIEiJ_G0014701	Apobec4	100	94.652	Mus_caroli
MGP_SPRETEiJ_G0015508	Apobec4	100	95.722	ENSMUSG00000055547	Apobec4	100	95.722	Mus_musculus
MGP_SPRETEiJ_G0015508	Apobec4	100	87.433	MGP_PahariEiJ_G0027937	Apobec4	100	87.433	Mus_pahari
MGP_SPRETEiJ_G0015508	Apobec4	98	62.097	ENSMPUG00000011756	APOBEC4	100	62.097	Mustela_putorius_furo
MGP_SPRETEiJ_G0015508	Apobec4	92	63.380	ENSMLUG00000002458	APOBEC4	100	62.060	Myotis_lucifugus
MGP_SPRETEiJ_G0015508	Apobec4	93	60.000	ENSNGAG00000017599	Apobec4	100	59.887	Nannospalax_galili
MGP_SPRETEiJ_G0015508	Apobec4	94	61.667	ENSNLEG00000035610	APOBEC4	100	60.705	Nomascus_leucogenys
MGP_SPRETEiJ_G0015508	Apobec4	86	63.665	ENSODEG00000009778	APOBEC4	95	63.385	Octodon_degus
MGP_SPRETEiJ_G0015508	Apobec4	91	50.000	ENSOANG00000001000	APOBEC4	100	48.641	Ornithorhynchus_anatinus
MGP_SPRETEiJ_G0015508	Apobec4	94	62.500	ENSOGAG00000003118	APOBEC4	99	61.685	Otolemur_garnettii
MGP_SPRETEiJ_G0015508	Apobec4	92	61.127	ENSOARG00000005287	APOBEC4	99	59.946	Ovis_aries
MGP_SPRETEiJ_G0015508	Apobec4	94	60.511	ENSPPAG00000038272	APOBEC4	100	60.000	Pan_paniscus
MGP_SPRETEiJ_G0015508	Apobec4	94	62.500	ENSPPRG00000014706	APOBEC4	100	61.518	Panthera_pardus
MGP_SPRETEiJ_G0015508	Apobec4	94	62.500	ENSPTIG00000005518	APOBEC4	100	61.518	Panthera_tigris_altaica
MGP_SPRETEiJ_G0015508	Apobec4	94	60.278	ENSPTRG00000047181	APOBEC4	100	59.783	Pan_troglodytes
MGP_SPRETEiJ_G0015508	Apobec4	92	72.254	ENSPEMG00000019164	Apobec4	100	71.588	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0015508	Apobec4	57	33.891	ENSPMAG00000006156	APOBEC4	67	33.469	Petromyzon_marinus
MGP_SPRETEiJ_G0015508	Apobec4	91	55.848	ENSPCIG00000003817	APOBEC4	96	54.366	Phascolarctos_cinereus
MGP_SPRETEiJ_G0015508	Apobec4	94	60.833	ENSPPYG00000000424	APOBEC4	100	59.892	Pongo_abelii
MGP_SPRETEiJ_G0015508	Apobec4	79	71.429	ENSPCAG00000015174	APOBEC4	84	71.429	Procavia_capensis
MGP_SPRETEiJ_G0015508	Apobec4	94	63.889	ENSPVAG00000001100	APOBEC4	100	63.315	Pteropus_vampyrus
MGP_SPRETEiJ_G0015508	Apobec4	100	75.733	ENSRNOG00000028089	Apobec4	97	75.733	Rattus_norvegicus
MGP_SPRETEiJ_G0015508	Apobec4	91	52.857	ENSSHAG00000013804	APOBEC4	100	50.678	Sarcophilus_harrisii
MGP_SPRETEiJ_G0015508	Apobec4	96	45.628	ENSSPUG00000010884	APOBEC4	97	45.628	Sphenodon_punctatus
MGP_SPRETEiJ_G0015508	Apobec4	96	61.035	ENSSSCG00000015561	APOBEC4	100	61.035	Sus_scrofa
MGP_SPRETEiJ_G0015508	Apobec4	94	59.722	ENSTBEG00000006476	APOBEC4	99	59.504	Tupaia_belangeri
MGP_SPRETEiJ_G0015508	Apobec4	93	62.953	ENSTTRG00000014784	APOBEC4	99	62.398	Tursiops_truncatus
MGP_SPRETEiJ_G0015508	Apobec4	92	64.873	ENSUAMG00000005088	APOBEC4	100	63.315	Ursus_americanus
MGP_SPRETEiJ_G0015508	Apobec4	92	64.873	ENSUMAG00000016285	APOBEC4	100	63.315	Ursus_maritimus
MGP_SPRETEiJ_G0015508	Apobec4	94	62.222	ENSVVUG00000009054	APOBEC4	100	61.247	Vulpes_vulpes
MGP_SPRETEiJ_G0015508	Apobec4	99	39.788	ENSXETG00000017441	apobec4	99	39.788	Xenopus_tropicalis