EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0015643 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Minus strand
Length: 21867 bases
Position: chr1:172420817-172442683
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0022125	RRM_1	PF00076.22	1.4e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0022126	-	6617	-	MGP_SPRETEiJ_P0022126	419 (aa)	-	UPI0000005BD5
MGP_SPRETEiJ_T0022125	-	7698	-	MGP_SPRETEiJ_P0022125	330 (aa)	-	UPI00000EA29F

Gene Model

Click here to download MGP_SPRETEiJ_G0015643's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0015643's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0015643	-	100	99.284	ENSG00000152332	UHMK1	100	99.284	Homo_sapiens
MGP_SPRETEiJ_G0015643	-	99	76.106	ENSAPOG00000016327	uhmk1	93	69.882	Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0015643	-	100	99.091	ENSAMEG00000001572	UHMK1	100	96.897	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0015643	-	99	77.946	ENSACIG00000010132	uhmk1	97	78.248	Amphilophus_citrinellus
MGP_SPRETEiJ_G0015643	-	99	75.811	ENSAOCG00000024473	uhmk1	93	69.647	Amphiprion_ocellaris
MGP_SPRETEiJ_G0015643	-	99	76.401	ENSAPEG00000023193	uhmk1	93	70.118	Amphiprion_percula
MGP_SPRETEiJ_G0015643	-	99	76.696	ENSATEG00000008282	uhmk1	94	71.154	Anabas_testudineus
MGP_SPRETEiJ_G0015643	-	100	88.485	ENSAPLG00000014799	UHMK1	100	88.253	Anas_platyrhynchos
MGP_SPRETEiJ_G0015643	-	96	42.543	ENSACAG00000022003	-	100	42.054	Anolis_carolinensis
MGP_SPRETEiJ_G0015643	-	100	99.284	ENSANAG00000022526	UHMK1	100	99.284	Aotus_nancymaae
MGP_SPRETEiJ_G0015643	-	99	76.106	ENSACLG00000027096	uhmk1	92	71.154	Astatotilapia_calliptera
MGP_SPRETEiJ_G0015643	-	99	79.331	ENSAMXG00000037781	uhmk1	93	73.105	Astyanax_mexicanus
MGP_SPRETEiJ_G0015643	-	100	99.523	ENSBTAG00000012694	UHMK1	100	99.523	Bos_taurus
MGP_SPRETEiJ_G0015643	-	100	98.568	ENSCJAG00000004291	UHMK1	100	98.568	Callithrix_jacchus
MGP_SPRETEiJ_G0015643	-	100	99.523	ENSCAFG00000013095	UHMK1	100	99.523	Canis_familiaris
MGP_SPRETEiJ_G0015643	-	100	99.091	ENSCAFG00020001672	UHMK1	100	99.394	Canis_lupus_dingo
MGP_SPRETEiJ_G0015643	-	100	99.523	ENSCHIG00000019078	UHMK1	100	99.523	Capra_hircus
MGP_SPRETEiJ_G0015643	-	99	99.282	ENSTSYG00000011273	UHMK1	91	99.282	Carlito_syrichta
MGP_SPRETEiJ_G0015643	-	100	73.273	ENSCAPG00000009137	UHMK1	100	73.574	Cavia_aperea
MGP_SPRETEiJ_G0015643	-	100	98.091	ENSCPOG00000004561	UHMK1	100	98.091	Cavia_porcellus
MGP_SPRETEiJ_G0015643	-	100	99.284	ENSCCAG00000033689	UHMK1	100	99.284	Cebus_capucinus
MGP_SPRETEiJ_G0015643	-	100	99.045	ENSCATG00000037499	UHMK1	100	99.045	Cercocebus_atys
MGP_SPRETEiJ_G0015643	-	100	99.523	ENSCLAG00000004715	-	100	99.523	Chinchilla_lanigera
MGP_SPRETEiJ_G0015643	-	95	85.897	ENSCLAG00000013603	-	99	77.941	Chinchilla_lanigera
MGP_SPRETEiJ_G0015643	-	100	99.045	ENSCSAG00000002742	UHMK1	100	99.045	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0015643	-	100	95.227	ENSCHOG00000011101	UHMK1	100	95.227	Choloepus_hoffmanni
MGP_SPRETEiJ_G0015643	-	87	89.931	ENSCPBG00000017971	UHMK1	100	89.931	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0015643	-	100	99.045	ENSCANG00000032661	UHMK1	100	99.045	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0015643	-	100	99.761	ENSCGRG00001013226	Uhmk1	100	99.761	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0015643	-	100	99.697	ENSCGRG00000000667	Uhmk1	100	99.697	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0015643	-	99	77.341	ENSCSEG00000000806	uhmk1	99	70.673	Cynoglossus_semilaevis
MGP_SPRETEiJ_G0015643	-	99	75.668	ENSCVAG00000005389	uhmk1	94	70.048	Cyprinodon_variegatus
MGP_SPRETEiJ_G0015643	-	99	79.635	ENSDARG00000059575	uhmk1	96	71.807	Danio_rerio
MGP_SPRETEiJ_G0015643	-	100	99.523	ENSDNOG00000009922	UHMK1	100	99.523	Dasypus_novemcinctus
MGP_SPRETEiJ_G0015643	-	100	99.523	ENSDORG00000011233	Uhmk1	100	99.523	Dipodomys_ordii
MGP_SPRETEiJ_G0015643	-	99	47.478	ENSEBUG00000001105	uhmk1	95	45.411	Eptatretus_burgeri
MGP_SPRETEiJ_G0015643	-	100	99.523	ENSECAG00000008744	UHMK1	100	99.523	Equus_caballus
MGP_SPRETEiJ_G0015643	-	100	82.100	ENSEEUG00000011231	UHMK1	100	82.100	Erinaceus_europaeus
MGP_SPRETEiJ_G0015643	-	99	78.788	ENSELUG00000003613	uhmk1	99	79.091	Esox_lucius
MGP_SPRETEiJ_G0015643	-	100	99.761	ENSFCAG00000014123	UHMK1	100	99.761	Felis_catus
MGP_SPRETEiJ_G0015643	-	100	87.879	ENSFALG00000003546	UHMK1	100	87.258	Ficedula_albicollis
MGP_SPRETEiJ_G0015643	-	100	99.091	ENSFDAG00000011567	UHMK1	100	99.505	Fukomys_damarensis
MGP_SPRETEiJ_G0015643	-	94	75.079	ENSFHEG00000012818	uhmk1	92	69.643	Fundulus_heteroclitus
MGP_SPRETEiJ_G0015643	-	99	74.164	ENSGMOG00000016438	uhmk1	99	68.473	Gadus_morhua
MGP_SPRETEiJ_G0015643	-	100	87.879	ENSGALG00000002734	UHMK1	99	83.568	Gallus_gallus
MGP_SPRETEiJ_G0015643	-	99	74.852	ENSGAFG00000016341	uhmk1	93	69.639	Gambusia_affinis
MGP_SPRETEiJ_G0015643	-	99	74.702	ENSGACG00000003529	uhmk1	99	67.916	Gasterosteus_aculeatus
MGP_SPRETEiJ_G0015643	-	87	90.972	ENSGAGG00000016257	UHMK1	100	90.972	Gopherus_agassizii
MGP_SPRETEiJ_G0015643	-	100	99.284	ENSGGOG00000002032	UHMK1	100	99.284	Gorilla_gorilla
MGP_SPRETEiJ_G0015643	-	99	77.946	ENSHBUG00000010792	uhmk1	99	71.942	Haplochromis_burtoni
MGP_SPRETEiJ_G0015643	-	100	99.523	ENSHGLG00000004032	UHMK1	100	99.523	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0015643	-	100	91.515	ENSHGLG00100018664	-	100	92.689	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0015643	-	99	79.635	ENSIPUG00000005095	uhmk1	94	73.645	Ictalurus_punctatus
MGP_SPRETEiJ_G0015643	-	100	99.284	ENSSTOG00000004265	UHMK1	100	99.284	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0015643	-	100	99.284	ENSJJAG00000015993	Uhmk1	100	99.284	Jaculus_jaculus
MGP_SPRETEiJ_G0015643	-	99	75.076	ENSKMAG00000016748	uhmk1	93	69.951	Kryptolebias_marmoratus
MGP_SPRETEiJ_G0015643	-	99	77.341	ENSLBEG00000001341	uhmk1	98	77.410	Labrus_bergylta
MGP_SPRETEiJ_G0015643	-	100	80.909	ENSLACG00000014100	UHMK1	94	75.238	Latimeria_chalumnae
MGP_SPRETEiJ_G0015643	-	99	81.459	ENSLOCG00000007180	uhmk1	92	75.369	Lepisosteus_oculatus
MGP_SPRETEiJ_G0015643	-	100	98.807	ENSLAFG00000007405	UHMK1	100	98.807	Loxodonta_africana
MGP_SPRETEiJ_G0015643	-	100	99.045	ENSMFAG00000041742	UHMK1	100	99.045	Macaca_fascicularis
MGP_SPRETEiJ_G0015643	-	100	99.091	ENSMMUG00000019513	UHMK1	100	99.091	Macaca_mulatta
MGP_SPRETEiJ_G0015643	-	100	99.045	ENSMNEG00000004169	UHMK1	100	99.045	Macaca_nemestrina
MGP_SPRETEiJ_G0015643	-	100	99.045	ENSMLEG00000038941	UHMK1	100	99.045	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0015643	-	99	76.923	ENSMAMG00000007396	uhmk1	93	70.071	Mastacembelus_armatus
MGP_SPRETEiJ_G0015643	-	99	76.106	ENSMZEG00005011160	uhmk1	92	71.154	Maylandia_zebra
MGP_SPRETEiJ_G0015643	-	100	87.879	ENSMGAG00000005043	UHMK1	100	88.182	Meleagris_gallopavo
MGP_SPRETEiJ_G0015643	-	100	99.761	ENSMAUG00000001735	Uhmk1	100	99.761	Mesocricetus_auratus
MGP_SPRETEiJ_G0015643	-	100	99.284	ENSMICG00000017256	-	100	99.284	Microcebus_murinus
MGP_SPRETEiJ_G0015643	-	98	97.222	ENSMICG00000046769	-	98	97.222	Microcebus_murinus
MGP_SPRETEiJ_G0015643	-	100	97.862	ENSMOCG00000008369	Uhmk1	100	97.862	Microtus_ochrogaster
MGP_SPRETEiJ_G0015643	-	99	77.711	ENSMMOG00000006591	uhmk1	99	78.012	Mola_mola
MGP_SPRETEiJ_G0015643	-	99	75.831	ENSMALG00000013850	uhmk1	99	68.810	Monopterus_albus
MGP_SPRETEiJ_G0015643	-	100	100.000	MGP_CAROLIEiJ_G0014837	-	100	100.000	Mus_caroli
MGP_SPRETEiJ_G0015643	-	100	100.000	ENSMUSG00000026667	Uhmk1	100	100.000	Mus_musculus
MGP_SPRETEiJ_G0015643	-	100	99.761	MGP_PahariEiJ_G0028074	Uhmk1	100	99.761	Mus_pahari
MGP_SPRETEiJ_G0015643	-	100	99.523	ENSMPUG00000003619	UHMK1	100	99.523	Mustela_putorius_furo
MGP_SPRETEiJ_G0015643	-	100	93.939	ENSMLUG00000002872	UHMK1	100	89.151	Myotis_lucifugus
MGP_SPRETEiJ_G0015643	-	100	99.523	ENSNGAG00000014202	Uhmk1	100	99.523	Nannospalax_galili
MGP_SPRETEiJ_G0015643	-	99	77.946	ENSNBRG00000016804	uhmk1	99	78.248	Neolamprologus_brichardi
MGP_SPRETEiJ_G0015643	-	100	99.284	ENSNLEG00000026604	UHMK1	100	99.284	Nomascus_leucogenys
MGP_SPRETEiJ_G0015643	-	75	99.074	ENSOPRG00000001881	-	77	99.123	Ochotona_princeps
MGP_SPRETEiJ_G0015643	-	100	99.284	ENSODEG00000006380	UHMK1	100	99.284	Octodon_degus
MGP_SPRETEiJ_G0015643	-	99	77.879	ENSONIG00000019209	uhmk1	97	72.482	Oreochromis_niloticus
MGP_SPRETEiJ_G0015643	-	100	99.284	ENSOCUG00000012411	UHMK1	100	99.284	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0015643	-	99	77.204	ENSORLG00000014340	uhmk1	99	70.460	Oryzias_latipes
MGP_SPRETEiJ_G0015643	-	99	76.596	ENSORLG00020001220	uhmk1	99	69.712	Oryzias_latipes_hni
MGP_SPRETEiJ_G0015643	-	99	75.371	ENSORLG00015019846	uhmk1	99	67.980	Oryzias_latipes_hsok
MGP_SPRETEiJ_G0015643	-	99	75.821	ENSOMEG00000001693	uhmk1	92	69.762	Oryzias_melastigma
MGP_SPRETEiJ_G0015643	-	100	99.284	ENSOGAG00000016110	UHMK1	100	99.284	Otolemur_garnettii
MGP_SPRETEiJ_G0015643	-	100	99.091	ENSOARG00000010744	UHMK1	100	95.943	Ovis_aries
MGP_SPRETEiJ_G0015643	-	100	99.284	ENSPPAG00000041163	UHMK1	100	99.284	Pan_paniscus
MGP_SPRETEiJ_G0015643	-	100	99.761	ENSPPRG00000002673	UHMK1	100	99.761	Panthera_pardus
MGP_SPRETEiJ_G0015643	-	99	99.696	ENSPTIG00000010715	UHMK1	100	99.696	Panthera_tigris_altaica
MGP_SPRETEiJ_G0015643	-	100	99.091	ENSPTRG00000001601	UHMK1	100	99.045	Pan_troglodytes
MGP_SPRETEiJ_G0015643	-	100	99.045	ENSPANG00000001321	UHMK1	100	99.045	Papio_anubis
MGP_SPRETEiJ_G0015643	-	99	81.155	ENSPKIG00000015328	uhmk1	96	73.671	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0015643	-	99	85.106	ENSPSIG00000014622	UHMK1	100	85.106	Pelodiscus_sinensis
MGP_SPRETEiJ_G0015643	-	99	70.821	ENSPMGG00000023620	uhmk1	97	64.988	Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0015643	-	100	99.761	ENSPEMG00000001487	Uhmk1	100	99.761	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0015643	-	100	97.852	ENSPCIG00000021507	UHMK1	100	97.852	Phascolarctos_cinereus
MGP_SPRETEiJ_G0015643	-	99	74.260	ENSPFOG00000015923	uhmk1	93	68.916	Poecilia_formosa
MGP_SPRETEiJ_G0015643	-	99	74.260	ENSPLAG00000014766	uhmk1	93	69.157	Poecilia_latipinna
MGP_SPRETEiJ_G0015643	-	99	74.260	ENSPMEG00000023850	uhmk1	93	68.916	Poecilia_mexicana
MGP_SPRETEiJ_G0015643	-	99	74.260	ENSPREG00000013295	uhmk1	93	69.157	Poecilia_reticulata
MGP_SPRETEiJ_G0015643	-	100	94.311	ENSPPYG00000000582	UHMK1	100	90.588	Pongo_abelii
MGP_SPRETEiJ_G0015643	-	100	84.010	ENSPCAG00000000531	UHMK1	100	84.010	Procavia_capensis
MGP_SPRETEiJ_G0015643	-	100	99.284	ENSPCOG00000025540	UHMK1	100	99.284	Propithecus_coquereli
MGP_SPRETEiJ_G0015643	-	100	98.091	ENSPVAG00000002624	UHMK1	100	98.091	Pteropus_vampyrus
MGP_SPRETEiJ_G0015643	-	99	77.946	ENSPNYG00000021906	uhmk1	99	71.942	Pundamilia_nyererei
MGP_SPRETEiJ_G0015643	-	99	79.331	ENSPNAG00000011288	uhmk1	94	72.861	Pygocentrus_nattereri
MGP_SPRETEiJ_G0015643	-	100	99.284	ENSRNOG00000056731	AABR07027799.1	100	99.284	Rattus_norvegicus
MGP_SPRETEiJ_G0015643	-	100	99.284	ENSRNOG00000002941	Uhmk1	100	99.284	Rattus_norvegicus
MGP_SPRETEiJ_G0015643	-	100	99.284	ENSRBIG00000044498	UHMK1	100	99.284	Rhinopithecus_bieti
MGP_SPRETEiJ_G0015643	-	100	99.284	ENSRROG00000031530	UHMK1	100	99.284	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0015643	-	100	99.284	ENSSBOG00000028187	UHMK1	100	99.284	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0015643	-	100	96.687	ENSSHAG00000012358	UHMK1	100	95.249	Sarcophilus_harrisii
MGP_SPRETEiJ_G0015643	-	99	82.067	ENSSFOG00015002013	uhmk1	93	75.369	Scleropages_formosus
MGP_SPRETEiJ_G0015643	-	99	76.991	ENSSMAG00000003891	uhmk1	92	71.394	Scophthalmus_maximus
MGP_SPRETEiJ_G0015643	-	99	77.581	ENSSDUG00000000226	uhmk1	95	70.327	Seriola_dumerili
MGP_SPRETEiJ_G0015643	-	99	77.581	ENSSLDG00000000833	uhmk1	95	70.327	Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0015643	-	100	87.273	ENSSPUG00000005763	UHMK1	99	82.742	Sphenodon_punctatus
MGP_SPRETEiJ_G0015643	-	99	76.991	ENSSPAG00000001165	uhmk1	99	65.796	Stegastes_partitus
MGP_SPRETEiJ_G0015643	-	100	99.523	ENSSSCG00000006342	UHMK1	100	99.523	Sus_scrofa
MGP_SPRETEiJ_G0015643	-	100	87.879	ENSTGUG00000017148	UHMK1	100	88.218	Taeniopygia_guttata
MGP_SPRETEiJ_G0015643	-	99	74.481	ENSTRUG00000022479	uhmk1	92	69.324	Takifugu_rubripes
MGP_SPRETEiJ_G0015643	-	99	75.684	ENSTNIG00000010802	uhmk1	99	70.443	Tetraodon_nigroviridis
MGP_SPRETEiJ_G0015643	-	100	99.284	ENSTBEG00000017334	UHMK1	100	99.284	Tupaia_belangeri
MGP_SPRETEiJ_G0015643	-	100	99.523	ENSUAMG00000027426	UHMK1	100	99.523	Ursus_americanus
MGP_SPRETEiJ_G0015643	-	100	95.758	ENSUMAG00000022774	UHMK1	84	96.438	Ursus_maritimus
MGP_SPRETEiJ_G0015643	-	100	99.091	ENSVPAG00000010726	UHMK1	100	99.045	Vicugna_pacos
MGP_SPRETEiJ_G0015643	-	99	99.275	ENSVVUG00000009990	UHMK1	100	99.515	Vulpes_vulpes
MGP_SPRETEiJ_G0015643	-	99	76.292	ENSXCOG00000005880	uhmk1	97	76.596	Xiphophorus_couchianus
MGP_SPRETEiJ_G0015643	-	99	74.260	ENSXMAG00000016056	uhmk1	93	69.157	Xiphophorus_maculatus