EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0015761 (Gene tree)
Gene ID: -
Gene Symbol: Hnrnpu
Alias: -
Full Name: heterogeneous nuclear ribonucleoprotein U
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Minus strand
Length: 15532 bases
Position: chr1:181134318-181149849
Accession: 1858195
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0022574	SAP	PF02037.27	3.1e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0022578	-	667	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0022575	-	712	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0022574	-	7624	-	MGP_SPRETEiJ_P0022574	800 (aa)	-	UPI0000028E37
MGP_SPRETEiJ_T0022577	-	865	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0022576	-	921	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0015761's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0015761's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_SPRETEiJ_G0015761	Hnrnpu	55	59.091	MGP_SPRETEiJ_G0030477	Hnrnpul1	61	51.910

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0015761	Hnrnpu	100	96.406	ENSG00000153187	HNRNPU	100	100.000	Homo_sapiens
MGP_SPRETEiJ_G0015761	Hnrnpu	75	56.672	ENSAPOG00000017400	hnrnpub	81	59.133	Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0015761	Hnrnpu	100	92.822	ENSAMEG00000009145	HNRNPU	100	92.822	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0015761	Hnrnpu	99	50.714	ENSACIG00000012138	hnrnpub	89	71.930	Amphilophus_citrinellus
MGP_SPRETEiJ_G0015761	Hnrnpu	75	56.992	ENSAOCG00000015843	hnrnpub	81	59.133	Amphiprion_ocellaris
MGP_SPRETEiJ_G0015761	Hnrnpu	75	56.992	ENSAPEG00000014679	hnrnpub	81	59.133	Amphiprion_percula
MGP_SPRETEiJ_G0015761	Hnrnpu	69	61.593	ENSATEG00000016178	hnrnpub	72	59.504	Anabas_testudineus
MGP_SPRETEiJ_G0015761	Hnrnpu	80	83.558	ENSACAG00000004511	HNRNPU	72	89.517	Anolis_carolinensis
MGP_SPRETEiJ_G0015761	Hnrnpu	100	96.384	ENSANAG00000033895	-	100	96.384	Aotus_nancymaae
MGP_SPRETEiJ_G0015761	Hnrnpu	73	59.902	ENSACLG00000008165	hnrnpub	86	78.723	Astatotilapia_calliptera
MGP_SPRETEiJ_G0015761	Hnrnpu	98	96.582	ENSBTAG00000007606	HNRNPU	98	96.582	Bos_taurus
MGP_SPRETEiJ_G0015761	Hnrnpu	100	94.068	ENSCJAG00000016914	HNRNPU	100	94.068	Callithrix_jacchus
MGP_SPRETEiJ_G0015761	Hnrnpu	100	96.654	ENSCAFG00020000918	HNRNPU	100	96.654	Canis_lupus_dingo
MGP_SPRETEiJ_G0015761	Hnrnpu	100	96.654	ENSCHIG00000004900	HNRNPU	100	96.654	Capra_hircus
MGP_SPRETEiJ_G0015761	Hnrnpu	100	94.654	ENSCPOG00000011887	HNRNPU	100	94.654	Cavia_porcellus
MGP_SPRETEiJ_G0015761	Hnrnpu	100	96.384	ENSCCAG00000037859	-	100	96.384	Cebus_capucinus
MGP_SPRETEiJ_G0015761	Hnrnpu	100	96.509	ENSCATG00000035273	HNRNPU	100	96.509	Cercocebus_atys
MGP_SPRETEiJ_G0015761	Hnrnpu	100	94.897	ENSCLAG00000007100	HNRNPU	100	94.897	Chinchilla_lanigera
MGP_SPRETEiJ_G0015761	Hnrnpu	100	96.035	ENSCSAG00000009219	HNRNPU	100	96.035	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0015761	Hnrnpu	81	93.333	ENSCHOG00000001387	HNRNPU	79	93.333	Choloepus_hoffmanni
MGP_SPRETEiJ_G0015761	Hnrnpu	100	77.950	ENSCPBG00000009415	HNRNPU	98	79.574	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0015761	Hnrnpu	100	93.516	ENSCANG00000022780	HNRNPU	100	93.392	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0015761	Hnrnpu	100	98.875	ENSCGRG00001020525	Hnrnpu	100	98.875	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0015761	Hnrnpu	68	78.261	ENSCSEG00000010804	hnrnpub	86	78.261	Cynoglossus_semilaevis
MGP_SPRETEiJ_G0015761	Hnrnpu	82	71.429	ENSCVAG00000004280	hnrnpub	85	71.429	Cyprinodon_variegatus
MGP_SPRETEiJ_G0015761	Hnrnpu	81	64.706	ENSDARG00000015206	hnrnpua	89	64.706	Danio_rerio
MGP_SPRETEiJ_G0015761	Hnrnpu	75	61.715	ENSDARG00000004735	hnrnpub	81	59.299	Danio_rerio
MGP_SPRETEiJ_G0015761	Hnrnpu	82	99.160	ENSDNOG00000000215	HNRNPU	91	99.160	Dasypus_novemcinctus
MGP_SPRETEiJ_G0015761	Hnrnpu	100	93.026	ENSDORG00000015491	Hnrnpu	100	92.653	Dipodomys_ordii
MGP_SPRETEiJ_G0015761	Hnrnpu	100	91.450	ENSETEG00000014565	HNRNPU	100	90.830	Echinops_telfairi
MGP_SPRETEiJ_G0015761	Hnrnpu	100	96.530	ENSEASG00005003017	HNRNPU	100	96.530	Equus_asinus_asinus
MGP_SPRETEiJ_G0015761	Hnrnpu	100	96.406	ENSECAG00000007955	HNRNPU	100	96.406	Equus_caballus
MGP_SPRETEiJ_G0015761	Hnrnpu	76	56.860	ENSELUG00000010733	hnrnpub	62	65.934	Esox_lucius
MGP_SPRETEiJ_G0015761	Hnrnpu	99	50.803	ENSELUG00000011966	hnrnpua	79	58.902	Esox_lucius
MGP_SPRETEiJ_G0015761	Hnrnpu	100	96.402	ENSFCAG00000002156	HNRNPU	99	96.402	Felis_catus
MGP_SPRETEiJ_G0015761	Hnrnpu	83	98.822	ENSFDAG00000006026	HNRNPU	100	98.822	Fukomys_damarensis
MGP_SPRETEiJ_G0015761	Hnrnpu	75	54.082	ENSFHEG00000022639	hnrnpub	62	60.259	Fundulus_heteroclitus
MGP_SPRETEiJ_G0015761	Hnrnpu	75	58.400	ENSGMOG00000001755	hnrnpub	77	60.561	Gadus_morhua
MGP_SPRETEiJ_G0015761	Hnrnpu	100	78.302	ENSGALG00000010671	HNRNPU	100	77.621	Gallus_gallus
MGP_SPRETEiJ_G0015761	Hnrnpu	59	64.043	ENSGAFG00000009369	hnrnpub	79	56.317	Gambusia_affinis
MGP_SPRETEiJ_G0015761	Hnrnpu	83	56.894	ENSGACG00000004679	hnrnpub	73	57.005	Gasterosteus_aculeatus
MGP_SPRETEiJ_G0015761	Hnrnpu	100	96.384	ENSGGOG00000004061	HNRNPU	100	96.384	Gorilla_gorilla
MGP_SPRETEiJ_G0015761	Hnrnpu	100	96.766	ENSHGLG00000010594	-	100	96.766	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0015761	Hnrnpu	82	99.160	ENSHGLG00100015093	HNRNPU	100	99.160	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0015761	Hnrnpu	79	83.333	ENSHCOG00000020091	hnrnpub	84	74.000	Hippocampus_comes
MGP_SPRETEiJ_G0015761	Hnrnpu	73	83.721	ENSIPUG00000007749	hnrnpu	92	68.421	Ictalurus_punctatus
MGP_SPRETEiJ_G0015761	Hnrnpu	100	94.404	ENSJJAG00000011371	Hnrnpu	100	94.404	Jaculus_jaculus
MGP_SPRETEiJ_G0015761	Hnrnpu	76	54.665	ENSKMAG00000004532	hnrnpub	80	55.038	Kryptolebias_marmoratus
MGP_SPRETEiJ_G0015761	Hnrnpu	75	56.399	ENSLBEG00000022520	hnrnpub	80	58.218	Labrus_bergylta
MGP_SPRETEiJ_G0015761	Hnrnpu	99	61.916	ENSLACG00000017463	HNRNPU	99	62.236	Latimeria_chalumnae
MGP_SPRETEiJ_G0015761	Hnrnpu	83	64.638	ENSLOCG00000016652	hnrnpua	76	66.615	Lepisosteus_oculatus
MGP_SPRETEiJ_G0015761	Hnrnpu	100	95.885	ENSLAFG00000021377	HNRNPU	100	95.885	Loxodonta_africana
MGP_SPRETEiJ_G0015761	Hnrnpu	100	96.509	ENSMFAG00000037308	HNRNPU	100	96.509	Macaca_fascicularis
MGP_SPRETEiJ_G0015761	Hnrnpu	100	96.633	ENSMMUG00000021098	HNRNPU	100	96.633	Macaca_mulatta
MGP_SPRETEiJ_G0015761	Hnrnpu	100	96.509	ENSMNEG00000043645	HNRNPU	100	96.509	Macaca_nemestrina
MGP_SPRETEiJ_G0015761	Hnrnpu	73	60.065	ENSMZEG00005003185	hnrnpub	86	78.723	Maylandia_zebra
MGP_SPRETEiJ_G0015761	Hnrnpu	100	99.125	ENSMAUG00000008842	Hnrnpu	100	99.125	Mesocricetus_auratus
MGP_SPRETEiJ_G0015761	Hnrnpu	100	96.509	ENSMICG00000004616	HNRNPU	100	96.509	Microcebus_murinus
MGP_SPRETEiJ_G0015761	Hnrnpu	100	98.875	ENSMOCG00000015623	Hnrnpu	100	98.875	Microtus_ochrogaster
MGP_SPRETEiJ_G0015761	Hnrnpu	100	87.779	ENSMODG00000006515	HNRNPU	100	86.839	Monodelphis_domestica
MGP_SPRETEiJ_G0015761	Hnrnpu	78	83.721	ENSMALG00000018243	hnrnpub	70	63.074	Monopterus_albus
MGP_SPRETEiJ_G0015761	Hnrnpu	100	99.875	MGP_CAROLIEiJ_G0014962	Hnrnpu	100	99.875	Mus_caroli
MGP_SPRETEiJ_G0015761	Hnrnpu	100	100.000	ENSMUSG00000039630	Hnrnpu	100	100.000	Mus_musculus
MGP_SPRETEiJ_G0015761	Hnrnpu	100	99.126	MGP_PahariEiJ_G0028193	Hnrnpu	100	99.126	Mus_pahari
MGP_SPRETEiJ_G0015761	Hnrnpu	100	88.600	ENSMLUG00000000475	HNRNPU	100	88.490	Myotis_lucifugus
MGP_SPRETEiJ_G0015761	Hnrnpu	100	97.753	ENSNGAG00000019075	Hnrnpu	100	97.753	Nannospalax_galili
MGP_SPRETEiJ_G0015761	Hnrnpu	99	85.266	ENSMEUG00000000541	HNRNPU	100	84.420	Notamacropus_eugenii
MGP_SPRETEiJ_G0015761	Hnrnpu	70	95.588	ENSODEG00000014458	-	100	95.588	Octodon_degus
MGP_SPRETEiJ_G0015761	Hnrnpu	81	78.723	ENSONIG00000001260	hnrnpub	89	78.723	Oreochromis_niloticus
MGP_SPRETEiJ_G0015761	Hnrnpu	98	94.314	ENSOCUG00000014469	HNRNPU	93	94.314	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0015761	Hnrnpu	80	83.721	ENSOMEG00000014951	hnrnpub	86	83.721	Oryzias_melastigma
MGP_SPRETEiJ_G0015761	Hnrnpu	100	96.283	ENSOGAG00000014024	HNRNPU	100	96.283	Otolemur_garnettii
MGP_SPRETEiJ_G0015761	Hnrnpu	83	98.492	ENSOARG00000004985	HNRNPU	91	98.490	Ovis_aries
MGP_SPRETEiJ_G0015761	Hnrnpu	100	96.883	ENSPPAG00000038652	HNRNPU	100	96.883	Pan_paniscus
MGP_SPRETEiJ_G0015761	Hnrnpu	100	94.068	ENSPPRG00000002662	HNRNPU	100	94.068	Panthera_pardus
MGP_SPRETEiJ_G0015761	Hnrnpu	100	96.883	ENSPTRG00000002182	HNRNPU	100	96.883	Pan_troglodytes
MGP_SPRETEiJ_G0015761	Hnrnpu	100	96.509	ENSPANG00000011643	HNRNPU	100	96.509	Papio_anubis
MGP_SPRETEiJ_G0015761	Hnrnpu	99	58.002	ENSPKIG00000022332	hnrnpub	78	64.697	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0015761	Hnrnpu	75	64.363	ENSPKIG00000006885	hnrnpua	78	66.667	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0015761	Hnrnpu	100	90.095	ENSPCIG00000008657	HNRNPU	98	90.590	Phascolarctos_cinereus
MGP_SPRETEiJ_G0015761	Hnrnpu	59	64.043	ENSPFOG00000002908	hnrnpub	80	56.402	Poecilia_formosa
MGP_SPRETEiJ_G0015761	Hnrnpu	76	54.185	ENSPLAG00000004160	hnrnpub	80	56.422	Poecilia_latipinna
MGP_SPRETEiJ_G0015761	Hnrnpu	100	90.954	ENSPCOG00000003883	-	100	91.202	Propithecus_coquereli
MGP_SPRETEiJ_G0015761	Hnrnpu	100	94.900	ENSPCOG00000018655	-	100	94.154	Propithecus_coquereli
MGP_SPRETEiJ_G0015761	Hnrnpu	100	94.068	ENSPVAG00000002581	HNRNPU	100	94.068	Pteropus_vampyrus
MGP_SPRETEiJ_G0015761	Hnrnpu	99	56.471	ENSPNAG00000001055	hnrnpub	79	64.353	Pygocentrus_nattereri
MGP_SPRETEiJ_G0015761	Hnrnpu	100	99.375	ENSRNOG00000033790	Hnrnpu	100	99.375	Rattus_norvegicus
MGP_SPRETEiJ_G0015761	Hnrnpu	100	95.885	ENSRBIG00000031519	HNRNPU	100	95.885	Rhinopithecus_bieti
MGP_SPRETEiJ_G0015761	Hnrnpu	100	96.159	ENSRROG00000041642	HNRNPU	100	96.159	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0015761	Hnrnpu	94	60.236	ENSSFOG00015019004	hnrnpu	77	66.667	Scleropages_formosus
MGP_SPRETEiJ_G0015761	Hnrnpu	99	57.362	ENSSFOG00015001124	hnrnpub	78	64.264	Scleropages_formosus
MGP_SPRETEiJ_G0015761	Hnrnpu	69	61.593	ENSSMAG00000003607	hnrnpub	77	54.255	Scophthalmus_maximus
MGP_SPRETEiJ_G0015761	Hnrnpu	75	55.198	ENSSDUG00000005912	hnrnpub	79	56.372	Seriola_dumerili
MGP_SPRETEiJ_G0015761	Hnrnpu	75	55.051	ENSSLDG00000004899	hnrnpub	79	56.222	Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0015761	Hnrnpu	100	77.658	ENSSPUG00000011393	HNRNPU	100	78.606	Sphenodon_punctatus
MGP_SPRETEiJ_G0015761	Hnrnpu	69	61.279	ENSSPAG00000011853	hnrnpub	80	56.692	Stegastes_partitus
MGP_SPRETEiJ_G0015761	Hnrnpu	100	96.406	ENSSSCG00000010877	HNRNPU	100	96.406	Sus_scrofa
MGP_SPRETEiJ_G0015761	Hnrnpu	71	61.034	ENSTRUG00000007759	hnrnpub	79	55.539	Takifugu_rubripes
MGP_SPRETEiJ_G0015761	Hnrnpu	80	76.744	ENSTNIG00000009725	hnrnpub	90	76.744	Tetraodon_nigroviridis
MGP_SPRETEiJ_G0015761	Hnrnpu	70	100.000	ENSTTRG00000005281	HNRNPU	71	100.000	Tursiops_truncatus
MGP_SPRETEiJ_G0015761	Hnrnpu	100	94.431	ENSUAMG00000021120	HNRNPU	100	94.431	Ursus_americanus
MGP_SPRETEiJ_G0015761	Hnrnpu	99	84.837	ENSUMAG00000012322	HNRNPU	97	94.662	Ursus_maritimus
MGP_SPRETEiJ_G0015761	Hnrnpu	80	92.481	ENSVPAG00000010520	HNRNPU	91	92.481	Vicugna_pacos
MGP_SPRETEiJ_G0015761	Hnrnpu	100	96.654	ENSVVUG00000026524	HNRNPU	100	96.654	Vulpes_vulpes
MGP_SPRETEiJ_G0015761	Hnrnpu	99	67.195	ENSXETG00000011386	hnrnpu	99	68.530	Xenopus_tropicalis
MGP_SPRETEiJ_G0015761	Hnrnpu	76	53.382	ENSXMAG00000010356	hnrnpub	80	56.250	Xiphophorus_maculatus