EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0015911 (Gene tree)
Gene ID: -
Gene Symbol: Zc3h12d
Alias: D730019B10Rik|TFL
Full Name: zinc finger CCCH type containing 12D
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Plus strand
Length: 36849 bases
Position: chr10:4942584-4979432
Accession: 3045313
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0023332	RNase_Zc3h12a	PF11977.8	3.3e-65	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0023332	-	4164	-	MGP_SPRETEiJ_P0023332	533 (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0015911's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0015911's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_SPRETEiJ_G0015911	Zc3h12d	58	60.383	MGP_SPRETEiJ_G0027441	Zc3h12a	84	56.962
MGP_SPRETEiJ_G0015911	Zc3h12d	58	59.283	MGP_SPRETEiJ_G0033350	Zc3h12c	50	36.957

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0015911	Zc3h12d	100	63.620	ENSG00000178199	ZC3H12D	98	91.346	Homo_sapiens
MGP_SPRETEiJ_G0015911	Zc3h12d	50	85.338	ENSAMEG00000018283	-	100	85.338	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0015911	Zc3h12d	59	70.701	ENSAPLG00000008379	ZC3H12D	96	70.701	Anas_platyrhynchos
MGP_SPRETEiJ_G0015911	Zc3h12d	59	64.762	ENSACAG00000006984	ZC3H12D	96	64.762	Anolis_carolinensis
MGP_SPRETEiJ_G0015911	Zc3h12d	100	63.934	ENSANAG00000020234	ZC3H12D	100	65.121	Aotus_nancymaae
MGP_SPRETEiJ_G0015911	Zc3h12d	99	61.041	ENSBTAG00000007388	ZC3H12D	99	61.041	Bos_taurus
MGP_SPRETEiJ_G0015911	Zc3h12d	100	63.919	ENSCJAG00000019606	ZC3H12D	89	76.821	Callithrix_jacchus
MGP_SPRETEiJ_G0015911	Zc3h12d	50	84.270	ENSCAFG00000000375	ZC3H12D	69	84.270	Canis_familiaris
MGP_SPRETEiJ_G0015911	Zc3h12d	99	60.753	ENSCHIG00000025964	ZC3H12D	99	60.753	Capra_hircus
MGP_SPRETEiJ_G0015911	Zc3h12d	95	57.031	ENSCAPG00000014473	ZC3H12D	99	57.031	Cavia_aperea
MGP_SPRETEiJ_G0015911	Zc3h12d	95	63.086	ENSCPOG00000014608	ZC3H12D	99	63.086	Cavia_porcellus
MGP_SPRETEiJ_G0015911	Zc3h12d	100	62.659	ENSCCAG00000013595	ZC3H12D	100	62.842	Cebus_capucinus
MGP_SPRETEiJ_G0015911	Zc3h12d	100	63.504	ENSCATG00000038224	ZC3H12D	89	76.159	Cercocebus_atys
MGP_SPRETEiJ_G0015911	Zc3h12d	95	65.020	ENSCLAG00000002831	ZC3H12D	99	65.217	Chinchilla_lanigera
MGP_SPRETEiJ_G0015911	Zc3h12d	99	62.364	ENSCSAG00000017217	ZC3H12D	99	62.545	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0015911	Zc3h12d	100	62.409	ENSCANG00000028774	ZC3H12D	89	76.159	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0015911	Zc3h12d	100	81.970	ENSCGRG00001019159	Zc3h12d	100	81.970	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0015911	Zc3h12d	100	81.970	ENSCGRG00000006178	Zc3h12d	100	81.970	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0015911	Zc3h12d	59	83.387	ENSDORG00000027483	-	98	83.387	Dipodomys_ordii
MGP_SPRETEiJ_G0015911	Zc3h12d	84	66.596	ENSEASG00005008940	ZC3H12D	79	83.190	Equus_asinus_asinus
MGP_SPRETEiJ_G0015911	Zc3h12d	100	62.345	ENSECAG00000017135	ZC3H12D	98	63.036	Equus_caballus
MGP_SPRETEiJ_G0015911	Zc3h12d	85	74.834	ENSEEUG00000000087	-	84	74.834	Erinaceus_europaeus
MGP_SPRETEiJ_G0015911	Zc3h12d	99	63.486	ENSFCAG00000011290	ZC3H12D	94	76.129	Felis_catus
MGP_SPRETEiJ_G0015911	Zc3h12d	58	71.521	ENSFALG00000013127	ZC3H12D	98	71.521	Ficedula_albicollis
MGP_SPRETEiJ_G0015911	Zc3h12d	54	86.458	ENSFDAG00000000874	ZC3H12D	74	86.458	Fukomys_damarensis
MGP_SPRETEiJ_G0015911	Zc3h12d	100	63.803	ENSGGOG00000005511	ZC3H12D	89	76.821	Gorilla_gorilla
MGP_SPRETEiJ_G0015911	Zc3h12d	100	72.285	ENSSTOG00000013975	ZC3H12D	100	72.285	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0015911	Zc3h12d	56	65.657	ENSLACG00000016816	ZC3H12D	94	65.657	Latimeria_chalumnae
MGP_SPRETEiJ_G0015911	Zc3h12d	58	81.994	ENSLAFG00000021535	-	97	81.994	Loxodonta_africana
MGP_SPRETEiJ_G0015911	Zc3h12d	100	63.321	ENSMFAG00000034693	ZC3H12D	89	75.497	Macaca_fascicularis
MGP_SPRETEiJ_G0015911	Zc3h12d	100	63.139	ENSMNEG00000004043	ZC3H12D	89	75.497	Macaca_nemestrina
MGP_SPRETEiJ_G0015911	Zc3h12d	59	68.051	ENSMGAG00000012594	ZC3H12D	97	68.051	Meleagris_gallopavo
MGP_SPRETEiJ_G0015911	Zc3h12d	100	64.234	ENSMICG00000044838	ZC3H12D	100	64.599	Microcebus_murinus
MGP_SPRETEiJ_G0015911	Zc3h12d	100	81.682	ENSMOCG00000015590	Zc3h12d	100	81.682	Microtus_ochrogaster
MGP_SPRETEiJ_G0015911	Zc3h12d	56	79.070	ENSMODG00000016829	-	95	79.070	Monodelphis_domestica
MGP_SPRETEiJ_G0015911	Zc3h12d	100	95.310	MGP_CAROLIEiJ_G0015104	Zc3h12d	100	95.310	Mus_caroli
MGP_SPRETEiJ_G0015911	Zc3h12d	100	97.561	ENSMUSG00000039981	Zc3h12d	100	97.561	Mus_musculus
MGP_SPRETEiJ_G0015911	Zc3h12d	100	92.308	MGP_PahariEiJ_G0023723	Zc3h12d	100	92.308	Mus_pahari
MGP_SPRETEiJ_G0015911	Zc3h12d	51	82.117	ENSMPUG00000018072	-	99	82.117	Mustela_putorius_furo
MGP_SPRETEiJ_G0015911	Zc3h12d	58	82.903	ENSMLUG00000029238	ZC3H12D	99	82.903	Myotis_lucifugus
MGP_SPRETEiJ_G0015911	Zc3h12d	91	65.369	ENSNGAG00000010502	Zc3h12d	96	65.369	Nannospalax_galili
MGP_SPRETEiJ_G0015911	Zc3h12d	86	69.516	ENSNLEG00000015313	-	100	69.516	Nomascus_leucogenys
MGP_SPRETEiJ_G0015911	Zc3h12d	53	78.014	ENSMEUG00000004686	-	99	78.014	Notamacropus_eugenii
MGP_SPRETEiJ_G0015911	Zc3h12d	100	61.049	ENSOPRG00000014034	ZC3H12D	100	62.172	Ochotona_princeps
MGP_SPRETEiJ_G0015911	Zc3h12d	89	65.828	ENSODEG00000002553	ZC3H12D	91	66.038	Octodon_degus
MGP_SPRETEiJ_G0015911	Zc3h12d	50	86.090	ENSOCUG00000007690	-	85	86.090	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0015911	Zc3h12d	99	61.255	ENSOGAG00000031025	ZC3H12D	99	61.255	Otolemur_garnettii
MGP_SPRETEiJ_G0015911	Zc3h12d	95	58.317	ENSOARG00000002626	ZC3H12D	99	58.317	Ovis_aries
MGP_SPRETEiJ_G0015911	Zc3h12d	100	63.985	ENSPPAG00000041304	ZC3H12D	89	76.821	Pan_paniscus
MGP_SPRETEiJ_G0015911	Zc3h12d	99	60.367	ENSPPRG00000004536	ZC3H12D	94	75.484	Panthera_pardus
MGP_SPRETEiJ_G0015911	Zc3h12d	100	63.985	ENSPTRG00000050357	ZC3H12D	89	76.821	Pan_troglodytes
MGP_SPRETEiJ_G0015911	Zc3h12d	100	63.504	ENSPANG00000034987	ZC3H12D	89	76.159	Papio_anubis
MGP_SPRETEiJ_G0015911	Zc3h12d	55	68.562	ENSPSIG00000016475	ZC3H12D	97	68.562	Pelodiscus_sinensis
MGP_SPRETEiJ_G0015911	Zc3h12d	100	80.935	ENSPEMG00000010962	Zc3h12d	100	80.935	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0015911	Zc3h12d	100	64.804	ENSPPYG00000017087	ZC3H12D	100	64.804	Pongo_abelii
MGP_SPRETEiJ_G0015911	Zc3h12d	100	54.731	ENSPCAG00000002991	ZC3H12D	100	54.731	Procavia_capensis
MGP_SPRETEiJ_G0015911	Zc3h12d	100	63.636	ENSPCOG00000017645	ZC3H12D	100	63.636	Propithecus_coquereli
MGP_SPRETEiJ_G0015911	Zc3h12d	100	86.867	ENSRNOG00000016041	Zc3h12d	100	86.867	Rattus_norvegicus
MGP_SPRETEiJ_G0015911	Zc3h12d	100	62.113	ENSRBIG00000012478	ZC3H12D	89	75.497	Rhinopithecus_bieti
MGP_SPRETEiJ_G0015911	Zc3h12d	100	62.113	ENSRROG00000038053	ZC3H12D	89	75.497	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0015911	Zc3h12d	100	63.071	ENSSBOG00000023337	ZC3H12D	89	76.159	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0015911	Zc3h12d	58	77.597	ENSSHAG00000017000	ZC3H12D	59	77.244	Sarcophilus_harrisii
MGP_SPRETEiJ_G0015911	Zc3h12d	100	60.550	ENSSSCG00000004109	ZC3H12D	98	60.550	Sus_scrofa
MGP_SPRETEiJ_G0015911	Zc3h12d	58	68.910	ENSTGUG00000010664	ZC3H12D	98	68.910	Taeniopygia_guttata
MGP_SPRETEiJ_G0015911	Zc3h12d	58	79.870	ENSTBEG00000000892	-	99	79.870	Tupaia_belangeri