EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0016111 (Gene tree)
Gene ID: -
Gene Symbol: Ascc3
Alias: ASC1p200|B630009I04Rik|Helic1
Full Name: activating signal cointegrator 1 complex subunit 3
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Plus strand
Length: 278925 bases
Position: chr10:48667555-48946479
Accession: 1925237
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0023985	ResIII	PF04851.15	2.3e-26	1	2
MGP_SPRETEiJ_P0023985	ResIII	PF04851.15	2.3e-26	2	2
MGP_SPRETEiJ_P0023985	DEAD	PF00270.29	2.7e-53	1	2
MGP_SPRETEiJ_P0023985	DEAD	PF00270.29	2.7e-53	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0023985	-	7477	-	MGP_SPRETEiJ_P0023985	2198 (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0016111's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0016111's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_SPRETEiJ_G0016111	Ascc3	75	50.649	MGP_SPRETEiJ_G0025170	Snrnp200	86	42.051
MGP_SPRETEiJ_G0016111	Ascc3	63	35.725	MGP_SPRETEiJ_G0028495	Hfm1	53	35.725

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0016111	Ascc3	100	92.234	ENSG00000112249	ASCC3	99	92.234	Homo_sapiens
MGP_SPRETEiJ_G0016111	Ascc3	100	90.418	ENSAMEG00000014749	ASCC3	99	90.418	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0016111	Ascc3	97	70.400	ENSACIG00000004551	ascc3	99	70.353	Amphilophus_citrinellus
MGP_SPRETEiJ_G0016111	Ascc3	100	72.616	ENSAOCG00000005106	ascc3	99	72.975	Amphiprion_ocellaris
MGP_SPRETEiJ_G0016111	Ascc3	96	73.602	ENSAPEG00000006181	ascc3	99	73.602	Amphiprion_percula
MGP_SPRETEiJ_G0016111	Ascc3	100	71.622	ENSATEG00000024950	ascc3	99	71.622	Anabas_testudineus
MGP_SPRETEiJ_G0016111	Ascc3	88	84.500	ENSAPLG00000012589	-	99	84.500	Anas_platyrhynchos
MGP_SPRETEiJ_G0016111	Ascc3	100	80.090	ENSACAG00000010080	ASCC3	99	80.090	Anolis_carolinensis
MGP_SPRETEiJ_G0016111	Ascc3	100	92.007	ENSANAG00000021476	ASCC3	99	92.007	Aotus_nancymaae
MGP_SPRETEiJ_G0016111	Ascc3	86	76.674	ENSACLG00000006736	ascc3	96	76.674	Astatotilapia_calliptera
MGP_SPRETEiJ_G0016111	Ascc3	99	70.588	ENSAMXG00000001395	ascc3	99	70.679	Astyanax_mexicanus
MGP_SPRETEiJ_G0016111	Ascc3	100	89.732	ENSBTAG00000020482	ASCC3	99	89.732	Bos_taurus
MGP_SPRETEiJ_G0016111	Ascc3	88	46.999	WBGene00013189	Y54E2A.4	99	44.978	Caenorhabditis_elegans
MGP_SPRETEiJ_G0016111	Ascc3	100	91.822	ENSCJAG00000001507	ASCC3	100	93.247	Callithrix_jacchus
MGP_SPRETEiJ_G0016111	Ascc3	100	90.191	ENSCAFG00000003554	ASCC3	99	90.191	Canis_familiaris
MGP_SPRETEiJ_G0016111	Ascc3	100	90.191	ENSCAFG00020016899	ASCC3	99	90.191	Canis_lupus_dingo
MGP_SPRETEiJ_G0016111	Ascc3	100	89.823	ENSCHIG00000023605	ASCC3	99	89.823	Capra_hircus
MGP_SPRETEiJ_G0016111	Ascc3	89	93.247	ENSTSYG00000006324	ASCC3	100	93.247	Carlito_syrichta
MGP_SPRETEiJ_G0016111	Ascc3	92	88.407	ENSCAPG00000010888	ASCC3	99	88.407	Cavia_aperea
MGP_SPRETEiJ_G0016111	Ascc3	100	91.587	ENSCPOG00000013989	ASCC3	100	91.587	Cavia_porcellus
MGP_SPRETEiJ_G0016111	Ascc3	100	92.189	ENSCCAG00000024230	ASCC3	99	92.189	Cebus_capucinus
MGP_SPRETEiJ_G0016111	Ascc3	100	92.598	ENSCATG00000011281	ASCC3	99	92.598	Cercocebus_atys
MGP_SPRETEiJ_G0016111	Ascc3	100	92.825	ENSCLAG00000009794	ASCC3	99	92.825	Chinchilla_lanigera
MGP_SPRETEiJ_G0016111	Ascc3	100	92.416	ENSCSAG00000014674	ASCC3	99	92.416	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0016111	Ascc3	93	84.385	ENSCHOG00000002063	ASCC3	85	84.385	Choloepus_hoffmanni
MGP_SPRETEiJ_G0016111	Ascc3	100	82.122	ENSCPBG00000003881	ASCC3	99	82.077	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0016111	Ascc3	81	60.290	ENSCSAVG00000007670	-	100	68.310	Ciona_savignyi
MGP_SPRETEiJ_G0016111	Ascc3	100	92.461	ENSCANG00000004215	ASCC3	99	92.461	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0016111	Ascc3	100	94.904	ENSCGRG00001000918	Ascc3	100	94.904	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0016111	Ascc3	100	94.823	ENSCGRG00000012933	Ascc3	100	94.823	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0016111	Ascc3	99	72.078	ENSCSEG00000012811	ascc3	99	71.713	Cynoglossus_semilaevis
MGP_SPRETEiJ_G0016111	Ascc3	99	70.949	ENSCVAG00000013014	ascc3	99	70.994	Cyprinodon_variegatus
MGP_SPRETEiJ_G0016111	Ascc3	92	72.200	ENSDARG00000086678	ascc3	100	86.195	Danio_rerio
MGP_SPRETEiJ_G0016111	Ascc3	80	95.311	ENSDNOG00000010279	ASCC3	99	95.311	Dasypus_novemcinctus
MGP_SPRETEiJ_G0016111	Ascc3	100	92.916	ENSDORG00000008572	Ascc3	99	92.916	Dipodomys_ordii
MGP_SPRETEiJ_G0016111	Ascc3	90	53.600	FBgn0038344	obe	91	53.600	Drosophila_melanogaster
MGP_SPRETEiJ_G0016111	Ascc3	82	98.046	ENSETEG00000010694	-	72	98.046	Echinops_telfairi
MGP_SPRETEiJ_G0016111	Ascc3	54	79.079	ENSEBUG00000007355	-	99	79.079	Eptatretus_burgeri
MGP_SPRETEiJ_G0016111	Ascc3	100	90.145	ENSEASG00005006324	ASCC3	99	90.145	Equus_asinus_asinus
MGP_SPRETEiJ_G0016111	Ascc3	100	90.191	ENSECAG00000012013	ASCC3	99	90.191	Equus_caballus
MGP_SPRETEiJ_G0016111	Ascc3	87	81.719	ENSEEUG00000009748	ASCC3	99	81.719	Erinaceus_europaeus
MGP_SPRETEiJ_G0016111	Ascc3	99	76.342	ENSELUG00000023441	ascc3	99	76.342	Esox_lucius
MGP_SPRETEiJ_G0016111	Ascc3	100	90.781	ENSFCAG00000031266	ASCC3	99	90.781	Felis_catus
MGP_SPRETEiJ_G0016111	Ascc3	100	81.559	ENSFALG00000005260	ASCC3	99	81.559	Ficedula_albicollis
MGP_SPRETEiJ_G0016111	Ascc3	100	91.689	ENSFDAG00000011358	ASCC3	99	91.689	Fukomys_damarensis
MGP_SPRETEiJ_G0016111	Ascc3	99	72.036	ENSFHEG00000019247	ascc3	99	78.853	Fundulus_heteroclitus
MGP_SPRETEiJ_G0016111	Ascc3	98	70.225	ENSGMOG00000018158	ascc3	99	70.087	Gadus_morhua
MGP_SPRETEiJ_G0016111	Ascc3	99	81.624	ENSGALG00000015465	ASCC3	99	81.624	Gallus_gallus
MGP_SPRETEiJ_G0016111	Ascc3	99	71.474	ENSGACG00000014141	ascc3	99	71.519	Gasterosteus_aculeatus
MGP_SPRETEiJ_G0016111	Ascc3	89	84.710	ENSGAGG00000020794	ASCC3	99	84.710	Gopherus_agassizii
MGP_SPRETEiJ_G0016111	Ascc3	100	92.189	ENSGGOG00000002790	ASCC3	99	92.189	Gorilla_gorilla
MGP_SPRETEiJ_G0016111	Ascc3	90	72.628	ENSHBUG00000015110	ascc3	98	72.692	Haplochromis_burtoni
MGP_SPRETEiJ_G0016111	Ascc3	100	92.144	ENSHGLG00000002093	ASCC3	99	92.144	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0016111	Ascc3	100	90.295	ENSHGLG00100005896	ASCC3	100	90.295	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0016111	Ascc3	99	71.688	ENSHCOG00000021142	ascc3	100	71.688	Hippocampus_comes
MGP_SPRETEiJ_G0016111	Ascc3	99	72.983	ENSIPUG00000013863	ascc3	99	73.028	Ictalurus_punctatus
MGP_SPRETEiJ_G0016111	Ascc3	100	91.174	ENSSTOG00000006645	ASCC3	100	91.174	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0016111	Ascc3	100	91.144	ENSJJAG00000022570	Ascc3	99	91.144	Jaculus_jaculus
MGP_SPRETEiJ_G0016111	Ascc3	100	72.333	ENSKMAG00000003953	ascc3	99	72.378	Kryptolebias_marmoratus
MGP_SPRETEiJ_G0016111	Ascc3	85	76.836	ENSLBEG00000009623	ascc3	99	76.944	Labrus_bergylta
MGP_SPRETEiJ_G0016111	Ascc3	75	81.553	ENSLACG00000015253	ascc3	100	81.553	Latimeria_chalumnae
MGP_SPRETEiJ_G0016111	Ascc3	100	76.635	ENSLOCG00000016550	ascc3	99	76.635	Lepisosteus_oculatus
MGP_SPRETEiJ_G0016111	Ascc3	89	78.633	ENSLAFG00000011363	ASCC3	100	78.633	Loxodonta_africana
MGP_SPRETEiJ_G0016111	Ascc3	100	92.461	ENSMFAG00000002081	ASCC3	99	92.461	Macaca_fascicularis
MGP_SPRETEiJ_G0016111	Ascc3	100	92.507	ENSMMUG00000022287	ASCC3	99	92.507	Macaca_mulatta
MGP_SPRETEiJ_G0016111	Ascc3	100	92.416	ENSMNEG00000032760	ASCC3	99	92.416	Macaca_nemestrina
MGP_SPRETEiJ_G0016111	Ascc3	100	91.308	ENSMLEG00000035241	ASCC3	99	91.308	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0016111	Ascc3	100	72.333	ENSMAMG00000005917	ascc3	99	72.333	Mastacembelus_armatus
MGP_SPRETEiJ_G0016111	Ascc3	76	80.647	ENSMZEG00005002710	ascc3	73	80.712	Maylandia_zebra
MGP_SPRETEiJ_G0016111	Ascc3	99	80.598	ENSMGAG00000013551	ASCC3	99	80.598	Meleagris_gallopavo
MGP_SPRETEiJ_G0016111	Ascc3	100	94.823	ENSMAUG00000018304	Ascc3	100	94.823	Mesocricetus_auratus
MGP_SPRETEiJ_G0016111	Ascc3	100	93.143	ENSMICG00000008861	ASCC3	99	93.143	Microcebus_murinus
MGP_SPRETEiJ_G0016111	Ascc3	100	94.868	ENSMOCG00000004549	Ascc3	99	94.868	Microtus_ochrogaster
MGP_SPRETEiJ_G0016111	Ascc3	95	69.369	ENSMMOG00000003198	ascc3	99	69.351	Mola_mola
MGP_SPRETEiJ_G0016111	Ascc3	100	84.873	ENSMODG00000018082	ASCC3	99	84.873	Monodelphis_domestica
MGP_SPRETEiJ_G0016111	Ascc3	96	70.165	ENSMALG00000015536	ascc3	99	70.165	Monopterus_albus
MGP_SPRETEiJ_G0016111	Ascc3	100	99.092	MGP_CAROLIEiJ_G0015302	Ascc3	100	99.092	Mus_caroli
MGP_SPRETEiJ_G0016111	Ascc3	100	99.773	ENSMUSG00000038774	Ascc3	100	99.773	Mus_musculus
MGP_SPRETEiJ_G0016111	Ascc3	100	90.463	ENSMPUG00000001675	ASCC3	99	90.463	Mustela_putorius_furo
MGP_SPRETEiJ_G0016111	Ascc3	100	89.782	ENSMLUG00000002886	ASCC3	99	89.782	Myotis_lucifugus
MGP_SPRETEiJ_G0016111	Ascc3	100	93.415	ENSNGAG00000000702	Ascc3	99	93.415	Nannospalax_galili
MGP_SPRETEiJ_G0016111	Ascc3	84	66.440	ENSNBRG00000022083	ascc3	91	66.440	Neolamprologus_brichardi
MGP_SPRETEiJ_G0016111	Ascc3	100	92.234	ENSNLEG00000013890	ASCC3	99	92.234	Nomascus_leucogenys
MGP_SPRETEiJ_G0016111	Ascc3	97	97.368	ENSMEUG00000003061	ASCC3	83	97.368	Notamacropus_eugenii
MGP_SPRETEiJ_G0016111	Ascc3	88	98.667	ENSOPRG00000010249	-	79	98.667	Ochotona_princeps
MGP_SPRETEiJ_G0016111	Ascc3	100	92.234	ENSODEG00000000069	ASCC3	99	92.234	Octodon_degus
MGP_SPRETEiJ_G0016111	Ascc3	99	71.747	ENSONIG00000016540	ascc3	99	71.793	Oreochromis_niloticus
MGP_SPRETEiJ_G0016111	Ascc3	99	83.454	ENSOANG00000008944	ASCC3	99	83.454	Ornithorhynchus_anatinus
MGP_SPRETEiJ_G0016111	Ascc3	99	92.360	ENSOCUG00000002766	ASCC3	100	92.360	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0016111	Ascc3	94	72.719	ENSORLG00000004221	ascc3	99	72.767	Oryzias_latipes
MGP_SPRETEiJ_G0016111	Ascc3	86	77.483	ENSORLG00020022595	ascc3	96	77.483	Oryzias_latipes_hni
MGP_SPRETEiJ_G0016111	Ascc3	94	72.719	ENSORLG00015009231	ascc3	99	72.767	Oryzias_latipes_hsok
MGP_SPRETEiJ_G0016111	Ascc3	99	71.039	ENSOMEG00000019630	ascc3	100	71.039	Oryzias_melastigma
MGP_SPRETEiJ_G0016111	Ascc3	89	91.062	ENSOGAG00000009875	ASCC3	100	91.062	Otolemur_garnettii
MGP_SPRETEiJ_G0016111	Ascc3	100	89.914	ENSOARG00000011627	ASCC3	99	89.914	Ovis_aries
MGP_SPRETEiJ_G0016111	Ascc3	100	92.280	ENSPPAG00000030772	ASCC3	99	92.280	Pan_paniscus
MGP_SPRETEiJ_G0016111	Ascc3	100	90.781	ENSPPRG00000011358	ASCC3	99	90.781	Panthera_pardus
MGP_SPRETEiJ_G0016111	Ascc3	100	90.509	ENSPTIG00000006331	ASCC3	99	90.509	Panthera_tigris_altaica
MGP_SPRETEiJ_G0016111	Ascc3	100	92.234	ENSPTRG00000018448	ASCC3	99	92.234	Pan_troglodytes
MGP_SPRETEiJ_G0016111	Ascc3	100	92.507	ENSPANG00000006307	ASCC3	99	92.507	Papio_anubis
MGP_SPRETEiJ_G0016111	Ascc3	100	73.207	ENSPKIG00000013639	ascc3	100	73.264	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0016111	Ascc3	78	84.686	ENSPSIG00000002620	-	96	84.686	Pelodiscus_sinensis
MGP_SPRETEiJ_G0016111	Ascc3	100	95.459	ENSPEMG00000015319	Ascc3	100	95.459	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0016111	Ascc3	68	78.753	ENSPMAG00000002163	-	100	78.753	Petromyzon_marinus
MGP_SPRETEiJ_G0016111	Ascc3	100	85.281	ENSPCIG00000017288	ASCC3	99	85.609	Phascolarctos_cinereus
MGP_SPRETEiJ_G0016111	Ascc3	88	74.832	ENSPFOG00000001462	ascc3	98	74.884	Poecilia_formosa
MGP_SPRETEiJ_G0016111	Ascc3	99	72.591	ENSPREG00000017616	ascc3	99	72.649	Poecilia_reticulata
MGP_SPRETEiJ_G0016111	Ascc3	100	90.963	ENSPPYG00000016869	ASCC3	99	90.963	Pongo_abelii
MGP_SPRETEiJ_G0016111	Ascc3	100	79.146	ENSPCAG00000008834	ASCC3	99	79.146	Procavia_capensis
MGP_SPRETEiJ_G0016111	Ascc3	100	83.197	ENSPVAG00000012827	ASCC3	99	83.197	Pteropus_vampyrus
MGP_SPRETEiJ_G0016111	Ascc3	86	76.621	ENSPNYG00000018913	ascc3	97	76.621	Pundamilia_nyererei
MGP_SPRETEiJ_G0016111	Ascc3	86	78.640	ENSPNAG00000016413	ascc3	97	78.640	Pygocentrus_nattereri
MGP_SPRETEiJ_G0016111	Ascc3	99	96.729	ENSRNOG00000037604	Ascc3	100	96.729	Rattus_norvegicus
MGP_SPRETEiJ_G0016111	Ascc3	100	92.507	ENSRROG00000045402	ASCC3	99	92.507	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0016111	Ascc3	82	44.704	YGR271W	-	90	44.704	Saccharomyces_cerevisiae
MGP_SPRETEiJ_G0016111	Ascc3	100	92.234	ENSSBOG00000025142	ASCC3	99	92.234	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0016111	Ascc3	100	84.912	ENSSHAG00000016496	ASCC3	99	84.912	Sarcophilus_harrisii
MGP_SPRETEiJ_G0016111	Ascc3	99	73.433	ENSSFOG00015010273	ascc3	99	73.672	Scleropages_formosus
MGP_SPRETEiJ_G0016111	Ascc3	100	71.771	ENSSMAG00000012927	ascc3	99	71.816	Scophthalmus_maximus
MGP_SPRETEiJ_G0016111	Ascc3	100	72.036	ENSSDUG00000010897	ascc3	99	72.036	Seriola_dumerili
MGP_SPRETEiJ_G0016111	Ascc3	100	71.978	ENSSLDG00000021782	ascc3	99	71.978	Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0016111	Ascc3	99	85.901	ENSSARG00000001858	ASCC3	92	85.901	Sorex_araneus
MGP_SPRETEiJ_G0016111	Ascc3	100	81.682	ENSSPUG00000001842	ASCC3	99	81.682	Sphenodon_punctatus
MGP_SPRETEiJ_G0016111	Ascc3	99	72.562	ENSSPAG00000007677	ascc3	99	72.562	Stegastes_partitus
MGP_SPRETEiJ_G0016111	Ascc3	100	90.145	ENSSSCG00000004358	ASCC3	99	90.968	Sus_scrofa
MGP_SPRETEiJ_G0016111	Ascc3	90	83.534	ENSTGUG00000012262	ASCC3	99	83.534	Taeniopygia_guttata
MGP_SPRETEiJ_G0016111	Ascc3	98	66.881	ENSTNIG00000005079	ascc3	100	66.943	Tetraodon_nigroviridis
MGP_SPRETEiJ_G0016111	Ascc3	91	95.522	ENSTBEG00000015236	ASCC3	86	95.522	Tupaia_belangeri
MGP_SPRETEiJ_G0016111	Ascc3	100	89.893	ENSTTRG00000008255	ASCC3	96	89.893	Tursiops_truncatus
MGP_SPRETEiJ_G0016111	Ascc3	68	95.616	ENSUAMG00000023340	-	99	94.343	Ursus_americanus
MGP_SPRETEiJ_G0016111	Ascc3	100	89.510	ENSUMAG00000021200	ASCC3	99	89.510	Ursus_maritimus
MGP_SPRETEiJ_G0016111	Ascc3	100	85.883	ENSVPAG00000001408	ASCC3	99	85.883	Vicugna_pacos
MGP_SPRETEiJ_G0016111	Ascc3	100	90.463	ENSVVUG00000015397	ASCC3	99	91.761	Vulpes_vulpes
MGP_SPRETEiJ_G0016111	Ascc3	79	80.982	ENSXETG00000032212	-	99	80.982	Xenopus_tropicalis
MGP_SPRETEiJ_G0016111	Ascc3	99	72.227	ENSXMAG00000000071	ascc3	99	72.273	Xiphophorus_maculatus