EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0016153 (Gene tree)
Gene ID: -
Gene Symbol: P4ha1
Alias: P4ha
Full Name: procollagen-proline%2C 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase)%2C alpha 1 polypeptide
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Plus strand
Length: 49834 bases
Position: chr10:57408228-57458061
Accession: 97463
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0024089	2OG-FeII_Oxy	PF03171.20	3.2e-08	1	1
MGP_SPRETEiJ_P0024090	2OG-FeII_Oxy	PF03171.20	4.3e-08	1	1
MGP_SPRETEiJ_P0024088	2OG-FeII_Oxy	PF03171.20	4.3e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0024089	-	2375	-	MGP_SPRETEiJ_P0024089	454 (aa)	-	UPI0000D8AFDC
MGP_SPRETEiJ_T0024088	-	4010	-	MGP_SPRETEiJ_P0024088	534 (aa)	-	UPI0000028431
MGP_SPRETEiJ_T0024090	-	2899	-	MGP_SPRETEiJ_P0024090	534 (aa)	-	UPI0000004068

Gene Model

Click here to download MGP_SPRETEiJ_G0016153's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0016153's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_SPRETEiJ_G0016153	P4ha1	99	63.227	MGP_SPRETEiJ_G0017195	P4ha2	99	62.852

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0016153	P4ha1	100	95.693	ENSG00000122884	P4HA1	100	95.693	Homo_sapiens
MGP_SPRETEiJ_G0016153	P4ha1	96	77.622	ENSAPOG00000005170	p4ha1b	99	73.713	Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0016153	P4ha1	100	94.944	ENSAMEG00000017009	P4HA1	100	94.944	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0016153	P4ha1	96	78.261	ENSACIG00000007255	p4ha1b	99	73.996	Amphilophus_citrinellus
MGP_SPRETEiJ_G0016153	P4ha1	96	78.322	ENSAOCG00000001647	p4ha1b	98	74.170	Amphiprion_ocellaris
MGP_SPRETEiJ_G0016153	P4ha1	96	78.322	ENSAPEG00000005243	p4ha1b	98	74.170	Amphiprion_percula
MGP_SPRETEiJ_G0016153	P4ha1	95	72.388	ENSAPEG00000010402	-	96	64.717	Amphiprion_percula
MGP_SPRETEiJ_G0016153	P4ha1	96	79.720	ENSATEG00000009272	p4ha1b	98	75.325	Anabas_testudineus
MGP_SPRETEiJ_G0016153	P4ha1	97	85.988	ENSAPLG00000009284	P4HA1	100	85.988	Anas_platyrhynchos
MGP_SPRETEiJ_G0016153	P4ha1	100	84.015	ENSACAG00000000564	P4HA1	99	84.015	Anolis_carolinensis
MGP_SPRETEiJ_G0016153	P4ha1	100	96.256	ENSANAG00000024545	P4HA1	100	97.333	Aotus_nancymaae
MGP_SPRETEiJ_G0016153	P4ha1	96	79.710	ENSACLG00000021556	p4ha1b	99	74.359	Astatotilapia_calliptera
MGP_SPRETEiJ_G0016153	P4ha1	100	75.163	ENSAMXG00000011123	p4ha1b	100	72.963	Astyanax_mexicanus
MGP_SPRETEiJ_G0016153	P4ha1	100	96.000	ENSBTAG00000032996	P4HA1	100	94.944	Bos_taurus
MGP_SPRETEiJ_G0016153	P4ha1	100	96.035	ENSCJAG00000007429	P4HA1	100	96.035	Callithrix_jacchus
MGP_SPRETEiJ_G0016153	P4ha1	100	97.000	ENSCAFG00000014573	P4HA1	100	94.944	Canis_familiaris
MGP_SPRETEiJ_G0016153	P4ha1	99	97.000	ENSCAFG00020023993	P4HA1	100	93.208	Canis_lupus_dingo
MGP_SPRETEiJ_G0016153	P4ha1	100	96.333	ENSCHIG00000013957	P4HA1	100	94.569	Capra_hircus
MGP_SPRETEiJ_G0016153	P4ha1	100	96.000	ENSTSYG00000004004	P4HA1	100	95.902	Carlito_syrichta
MGP_SPRETEiJ_G0016153	P4ha1	100	96.333	ENSCPOG00000015701	P4HA1	100	96.333	Cavia_porcellus
MGP_SPRETEiJ_G0016153	P4ha1	100	96.035	ENSCATG00000029618	P4HA1	100	97.000	Cercocebus_atys
MGP_SPRETEiJ_G0016153	P4ha1	100	96.667	ENSCLAG00000017260	P4HA1	100	96.667	Chinchilla_lanigera
MGP_SPRETEiJ_G0016153	P4ha1	100	95.506	ENSCSAG00000008626	P4HA1	100	95.506	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0016153	P4ha1	99	86.755	ENSCPBG00000007933	P4HA1	99	85.607	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0016153	P4ha1	100	96.035	ENSCANG00000033147	P4HA1	100	97.000	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0016153	P4ha1	100	97.000	ENSCGRG00001007006	P4ha1	100	95.815	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0016153	P4ha1	100	97.000	ENSCGRG00000009371	P4ha1	100	95.815	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0016153	P4ha1	100	72.509	ENSCSEG00000004939	p4ha1b	99	72.509	Cynoglossus_semilaevis
MGP_SPRETEiJ_G0016153	P4ha1	100	72.222	ENSCVAG00000016433	p4ha1b	100	72.029	Cyprinodon_variegatus
MGP_SPRETEiJ_G0016153	P4ha1	84	54.472	ENSDARG00000017038	zgc:152670	95	54.274	Danio_rerio
MGP_SPRETEiJ_G0016153	P4ha1	97	75.479	ENSDARG00000071082	p4ha1b	100	76.316	Danio_rerio
MGP_SPRETEiJ_G0016153	P4ha1	99	93.960	ENSDNOG00000013665	P4HA1	94	92.481	Dasypus_novemcinctus
MGP_SPRETEiJ_G0016153	P4ha1	100	97.000	ENSDORG00000003405	P4ha1	100	95.154	Dipodomys_ordii
MGP_SPRETEiJ_G0016153	P4ha1	98	62.305	ENSEBUG00000005379	p4ha1b	98	60.721	Eptatretus_burgeri
MGP_SPRETEiJ_G0016153	P4ha1	100	95.815	ENSEASG00005016606	P4HA1	100	97.000	Equus_asinus_asinus
MGP_SPRETEiJ_G0016153	P4ha1	99	93.396	ENSECAG00000012496	P4HA1	99	96.063	Equus_caballus
MGP_SPRETEiJ_G0016153	P4ha1	99	89.610	ENSEEUG00000005542	P4HA1	85	89.610	Erinaceus_europaeus
MGP_SPRETEiJ_G0016153	P4ha1	99	72.828	ENSELUG00000005913	p4ha1b	99	74.275	Esox_lucius
MGP_SPRETEiJ_G0016153	P4ha1	100	96.333	ENSFCAG00000018673	P4HA1	100	94.944	Felis_catus
MGP_SPRETEiJ_G0016153	P4ha1	99	87.417	ENSFALG00000012773	P4HA1	99	84.860	Ficedula_albicollis
MGP_SPRETEiJ_G0016153	P4ha1	100	95.333	ENSFDAG00000007094	P4HA1	100	86.220	Fukomys_damarensis
MGP_SPRETEiJ_G0016153	P4ha1	96	76.224	ENSFHEG00000022856	p4ha1b	98	73.211	Fundulus_heteroclitus
MGP_SPRETEiJ_G0016153	P4ha1	94	71.382	ENSGMOG00000018948	p4ha1b	99	70.155	Gadus_morhua
MGP_SPRETEiJ_G0016153	P4ha1	99	88.079	ENSGALG00000004325	P4HA1	100	85.047	Gallus_gallus
MGP_SPRETEiJ_G0016153	P4ha1	97	75.429	ENSGAFG00000019818	p4ha1b	98	74.307	Gambusia_affinis
MGP_SPRETEiJ_G0016153	P4ha1	96	73.427	ENSGACG00000010233	p4ha1b	99	72.037	Gasterosteus_aculeatus
MGP_SPRETEiJ_G0016153	P4ha1	100	96.035	ENSGGOG00000015551	P4HA1	100	97.000	Gorilla_gorilla
MGP_SPRETEiJ_G0016153	P4ha1	96	79.710	ENSHBUG00000015524	p4ha1b	98	72.963	Haplochromis_burtoni
MGP_SPRETEiJ_G0016153	P4ha1	100	96.667	ENSHGLG00000011764	P4HA1	100	96.667	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0016153	P4ha1	94	75.000	ENSHCOG00000017152	p4ha1b	99	73.930	Hippocampus_comes
MGP_SPRETEiJ_G0016153	P4ha1	97	75.290	ENSIPUG00000015157	P4HA1	100	73.970	Ictalurus_punctatus
MGP_SPRETEiJ_G0016153	P4ha1	100	95.815	ENSSTOG00000027062	P4HA1	100	95.815	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0016153	P4ha1	100	95.374	ENSJJAG00000004232	P4ha1	100	95.374	Jaculus_jaculus
MGP_SPRETEiJ_G0016153	P4ha1	96	76.224	ENSKMAG00000001588	p4ha1b	99	73.897	Kryptolebias_marmoratus
MGP_SPRETEiJ_G0016153	P4ha1	97	74.761	ENSLBEG00000018911	p4ha1b	98	73.655	Labrus_bergylta
MGP_SPRETEiJ_G0016153	P4ha1	98	81.418	ENSLACG00000010202	P4HA1	99	79.963	Latimeria_chalumnae
MGP_SPRETEiJ_G0016153	P4ha1	99	78.431	ENSLOCG00000008546	p4ha1b	98	77.528	Lepisosteus_oculatus
MGP_SPRETEiJ_G0016153	P4ha1	100	92.884	ENSLAFG00000002652	P4HA1	100	92.884	Loxodonta_africana
MGP_SPRETEiJ_G0016153	P4ha1	100	96.035	ENSMFAG00000030507	P4HA1	100	97.000	Macaca_fascicularis
MGP_SPRETEiJ_G0016153	P4ha1	100	96.035	ENSMMUG00000011274	P4HA1	100	97.000	Macaca_mulatta
MGP_SPRETEiJ_G0016153	P4ha1	99	93.246	ENSMNEG00000011433	P4HA1	98	95.303	Macaca_nemestrina
MGP_SPRETEiJ_G0016153	P4ha1	96	90.215	ENSMLEG00000043338	P4HA1	100	98.770	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0016153	P4ha1	96	77.622	ENSMAMG00000015854	p4ha1b	99	73.655	Mastacembelus_armatus
MGP_SPRETEiJ_G0016153	P4ha1	96	79.710	ENSMZEG00005027421	p4ha1b	98	72.963	Maylandia_zebra
MGP_SPRETEiJ_G0016153	P4ha1	99	84.916	ENSMGAG00000005554	P4HA1	100	86.513	Meleagris_gallopavo
MGP_SPRETEiJ_G0016153	P4ha1	100	78.879	ENSMAUG00000011056	P4ha1	97	89.333	Mesocricetus_auratus
MGP_SPRETEiJ_G0016153	P4ha1	100	96.035	ENSMICG00000031365	P4HA1	100	97.000	Microcebus_murinus
MGP_SPRETEiJ_G0016153	P4ha1	100	97.667	ENSMOCG00000017531	P4ha1	100	96.916	Microtus_ochrogaster
MGP_SPRETEiJ_G0016153	P4ha1	96	77.622	ENSMMOG00000008022	p4ha1b	99	74.026	Mola_mola
MGP_SPRETEiJ_G0016153	P4ha1	100	92.079	ENSMODG00000000121	P4HA1	99	89.385	Monodelphis_domestica
MGP_SPRETEiJ_G0016153	P4ha1	96	76.224	ENSMALG00000019674	p4ha1b	98	73.333	Monopterus_albus
MGP_SPRETEiJ_G0016153	P4ha1	100	99.559	MGP_CAROLIEiJ_G0015342	P4ha1	100	99.559	Mus_caroli
MGP_SPRETEiJ_G0016153	P4ha1	100	100.000	ENSMUSG00000019916	P4ha1	100	100.000	Mus_musculus
MGP_SPRETEiJ_G0016153	P4ha1	100	99.119	MGP_PahariEiJ_G0030758	P4ha1	100	99.333	Mus_pahari
MGP_SPRETEiJ_G0016153	P4ha1	100	96.667	ENSMPUG00000003940	P4HA1	100	95.131	Mustela_putorius_furo
MGP_SPRETEiJ_G0016153	P4ha1	100	94.569	ENSMLUG00000006548	P4HA1	100	94.569	Myotis_lucifugus
MGP_SPRETEiJ_G0016153	P4ha1	100	98.333	ENSNGAG00000014487	P4ha1	100	98.333	Nannospalax_galili
MGP_SPRETEiJ_G0016153	P4ha1	96	79.710	ENSNBRG00000014791	p4ha1b	99	74.060	Neolamprologus_brichardi
MGP_SPRETEiJ_G0016153	P4ha1	100	89.485	ENSNLEG00000035416	P4HA1	99	95.851	Nomascus_leucogenys
MGP_SPRETEiJ_G0016153	P4ha1	89	91.429	ENSMEUG00000010326	P4HA1	95	81.762	Notamacropus_eugenii
MGP_SPRETEiJ_G0016153	P4ha1	100	89.000	ENSOPRG00000000990	P4HA1	100	83.895	Ochotona_princeps
MGP_SPRETEiJ_G0016153	P4ha1	100	95.154	ENSODEG00000015164	P4HA1	100	95.154	Octodon_degus
MGP_SPRETEiJ_G0016153	P4ha1	96	79.710	ENSONIG00000000737	p4ha1b	88	73.346	Oreochromis_niloticus
MGP_SPRETEiJ_G0016153	P4ha1	80	91.608	ENSOANG00000001125	-	100	91.608	Ornithorhynchus_anatinus
MGP_SPRETEiJ_G0016153	P4ha1	100	94.195	ENSOCUG00000009739	P4HA1	100	94.195	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0016153	P4ha1	96	76.923	ENSORLG00000005147	p4ha1b	100	75.194	Oryzias_latipes
MGP_SPRETEiJ_G0016153	P4ha1	96	76.923	ENSORLG00020010911	p4ha1b	98	73.801	Oryzias_latipes_hni
MGP_SPRETEiJ_G0016153	P4ha1	87	79.167	ENSORLG00015016175	p4ha1b	98	74.741	Oryzias_latipes_hsok
MGP_SPRETEiJ_G0016153	P4ha1	96	77.622	ENSOMEG00000009962	p4ha1b	99	74.677	Oryzias_melastigma
MGP_SPRETEiJ_G0016153	P4ha1	100	94.030	ENSOGAG00000003483	P4HA1	100	94.030	Otolemur_garnettii
MGP_SPRETEiJ_G0016153	P4ha1	100	96.333	ENSOARG00000007348	P4HA1	100	94.569	Ovis_aries
MGP_SPRETEiJ_G0016153	P4ha1	100	88.540	ENSPPAG00000030135	P4HA1	100	98.770	Pan_paniscus
MGP_SPRETEiJ_G0016153	P4ha1	100	96.333	ENSPPRG00000002655	P4HA1	100	94.944	Panthera_pardus
MGP_SPRETEiJ_G0016153	P4ha1	100	96.333	ENSPTIG00000007711	P4HA1	100	94.944	Panthera_tigris_altaica
MGP_SPRETEiJ_G0016153	P4ha1	100	93.833	ENSPTRG00000002619	P4HA1	100	93.833	Pan_troglodytes
MGP_SPRETEiJ_G0016153	P4ha1	100	96.035	ENSPANG00000022355	P4HA1	100	97.000	Papio_anubis
MGP_SPRETEiJ_G0016153	P4ha1	99	76.030	ENSPKIG00000000438	p4ha1b	99	76.030	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0016153	P4ha1	99	87.417	ENSPSIG00000016298	P4HA1	100	85.955	Pelodiscus_sinensis
MGP_SPRETEiJ_G0016153	P4ha1	95	80.597	ENSPMGG00000007593	p4ha1b	99	74.624	Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0016153	P4ha1	100	96.067	ENSPEMG00000006561	P4ha1	100	96.067	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0016153	P4ha1	100	92.079	ENSPCIG00000018768	P4HA1	100	89.944	Phascolarctos_cinereus
MGP_SPRETEiJ_G0016153	P4ha1	96	76.923	ENSPFOG00000018574	p4ha1b	98	73.752	Poecilia_formosa
MGP_SPRETEiJ_G0016153	P4ha1	96	76.923	ENSPLAG00000012628	p4ha1b	99	74.837	Poecilia_latipinna
MGP_SPRETEiJ_G0016153	P4ha1	96	76.224	ENSPMEG00000024082	p4ha1b	98	73.567	Poecilia_mexicana
MGP_SPRETEiJ_G0016153	P4ha1	96	76.923	ENSPREG00000010003	p4ha1b	98	74.492	Poecilia_reticulata
MGP_SPRETEiJ_G0016153	P4ha1	100	95.693	ENSPPYG00000002348	P4HA1	100	95.693	Pongo_abelii
MGP_SPRETEiJ_G0016153	P4ha1	95	85.630	ENSPCOG00000017553	P4HA1	100	98.361	Propithecus_coquereli
MGP_SPRETEiJ_G0016153	P4ha1	99	85.333	ENSPVAG00000012989	P4HA1	99	84.906	Pteropus_vampyrus
MGP_SPRETEiJ_G0016153	P4ha1	96	79.710	ENSPNYG00000002443	p4ha1b	98	72.878	Pundamilia_nyererei
MGP_SPRETEiJ_G0016153	P4ha1	100	72.928	ENSPNAG00000023149	p4ha1b	99	73.383	Pygocentrus_nattereri
MGP_SPRETEiJ_G0016153	P4ha1	100	99.667	ENSRNOG00000050655	P4ha1	100	98.502	Rattus_norvegicus
MGP_SPRETEiJ_G0016153	P4ha1	100	91.824	ENSRBIG00000035304	P4HA1	100	82.959	Rhinopithecus_bieti
MGP_SPRETEiJ_G0016153	P4ha1	100	96.035	ENSRROG00000044078	P4HA1	100	97.000	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0016153	P4ha1	71	89.896	ENSSHAG00000008056	P4HA1	100	88.342	Sarcophilus_harrisii
MGP_SPRETEiJ_G0016153	P4ha1	94	81.102	ENSSFOG00015009176	p4ha1b	100	75.882	Scleropages_formosus
MGP_SPRETEiJ_G0016153	P4ha1	100	73.290	ENSSMAG00000019199	p4ha1b	99	73.013	Scophthalmus_maximus
MGP_SPRETEiJ_G0016153	P4ha1	96	76.923	ENSSDUG00000016587	p4ha1b	98	73.752	Seriola_dumerili
MGP_SPRETEiJ_G0016153	P4ha1	96	76.224	ENSSLDG00000016261	p4ha1b	98	74.122	Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0016153	P4ha1	100	90.449	ENSSARG00000003275	P4HA1	100	90.449	Sorex_araneus
MGP_SPRETEiJ_G0016153	P4ha1	99	85.206	ENSSPUG00000002624	P4HA1	99	85.206	Sphenodon_punctatus
MGP_SPRETEiJ_G0016153	P4ha1	83	82.895	ENSSPAG00000011193	p4ha1b	100	73.134	Stegastes_partitus
MGP_SPRETEiJ_G0016153	P4ha1	100	95.667	ENSSSCG00000010292	P4HA1	100	94.569	Sus_scrofa
MGP_SPRETEiJ_G0016153	P4ha1	99	86.755	ENSTGUG00000004364	-	99	84.486	Taeniopygia_guttata
MGP_SPRETEiJ_G0016153	P4ha1	99	72.756	ENSTRUG00000004081	p4ha1b	99	73.394	Takifugu_rubripes
MGP_SPRETEiJ_G0016153	P4ha1	99	73.667	ENSTNIG00000017021	p4ha1b	99	73.084	Tetraodon_nigroviridis
MGP_SPRETEiJ_G0016153	P4ha1	100	93.446	ENSTTRG00000009782	P4HA1	100	92.884	Tursiops_truncatus
MGP_SPRETEiJ_G0016153	P4ha1	54	98.770	ENSUAMG00000011694	-	100	98.770	Ursus_americanus
MGP_SPRETEiJ_G0016153	P4ha1	100	95.318	ENSUMAG00000009024	P4HA1	100	95.318	Ursus_maritimus
MGP_SPRETEiJ_G0016153	P4ha1	100	96.333	ENSVPAG00000007253	P4HA1	100	85.019	Vicugna_pacos
MGP_SPRETEiJ_G0016153	P4ha1	100	97.000	ENSVVUG00000022660	P4HA1	100	94.944	Vulpes_vulpes
MGP_SPRETEiJ_G0016153	P4ha1	99	80.795	ENSXETG00000006154	p4ha1	99	75.701	Xenopus_tropicalis
MGP_SPRETEiJ_G0016153	P4ha1	96	78.261	ENSXCOG00000010262	p4ha1b	99	73.567	Xiphophorus_couchianus
MGP_SPRETEiJ_G0016153	P4ha1	96	76.224	ENSXMAG00000003889	p4ha1b	98	73.840	Xiphophorus_maculatus