EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0016200 (Gene tree)
Gene ID: -
Gene Symbol: Ddx50
Alias: 4933429B04Rik|8430408E17Rik|GU2|RH-II/Gubeta
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 50
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Minus strand
Length: 39068 bases
Position: chr10:60928012-60967079
Accession: 2182303
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0024279	GUCT	PF08152.12	4.8e-28	1	1
MGP_SPRETEiJ_P0024279	ResIII	PF04851.15	5.9e-10	1	1
MGP_SPRETEiJ_P0024279	DEAD	PF00270.29	1.9e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0024279	-	2527	-	MGP_SPRETEiJ_P0024279	734 (aa)	-	UPI0000027E42

Gene Model

Click here to download MGP_SPRETEiJ_G0016200's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0016200's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_SPRETEiJ_G0016200	Ddx50	60	33.115	MGP_SPRETEiJ_G0025620	Ddx27	52	34.129
MGP_SPRETEiJ_G0016200	Ddx50	50	32.620	MGP_SPRETEiJ_G0018339	Eif4a3	86	32.620
MGP_SPRETEiJ_G0016200	Ddx50	55	32.867	MGP_SPRETEiJ_G0015336	Ddx18	57	34.351
MGP_SPRETEiJ_G0016200	Ddx50	54	31.204	MGP_SPRETEiJ_G0030034	Ddx47	94	30.175
MGP_SPRETEiJ_G0016200	Ddx50	82	66.446	MGP_SPRETEiJ_G0016199	Ddx21	70	64.887
MGP_SPRETEiJ_G0016200	Ddx50	50	31.367	MGP_SPRETEiJ_G0021508	Eif4a2	90	30.904
MGP_SPRETEiJ_G0016200	Ddx50	50	33.962	MGP_SPRETEiJ_G0020915	Ddx17	55	33.962

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0016200	Ddx50	92	95.575	ENSG00000107625	DDX50	92	94.838	Homo_sapiens
MGP_SPRETEiJ_G0016200	Ddx50	93	94.436	ENSAMEG00000017992	DDX50	92	93.814	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0016200	Ddx50	92	75.977	ENSANAG00000017785	-	91	75.398	Aotus_nancymaae
MGP_SPRETEiJ_G0016200	Ddx50	100	95.251	ENSBTAG00000033413	DDX50	92	94.838	Bos_taurus
MGP_SPRETEiJ_G0016200	Ddx50	92	95.575	ENSCJAG00000018844	DDX50	99	97.347	Callithrix_jacchus
MGP_SPRETEiJ_G0016200	Ddx50	93	94.876	ENSCAFG00000013776	DDX50	99	94.256	Canis_familiaris
MGP_SPRETEiJ_G0016200	Ddx50	93	94.876	ENSCAFG00020025977	DDX50	92	94.256	Canis_lupus_dingo
MGP_SPRETEiJ_G0016200	Ddx50	100	94.980	ENSCHIG00000000285	DDX50	92	94.543	Capra_hircus
MGP_SPRETEiJ_G0016200	Ddx50	92	94.985	ENSTSYG00000004192	DDX50	99	97.326	Carlito_syrichta
MGP_SPRETEiJ_G0016200	Ddx50	91	75.334	ENSCAPG00000007230	-	87	77.504	Cavia_aperea
MGP_SPRETEiJ_G0016200	Ddx50	91	95.245	ENSCPOG00000002131	-	92	95.126	Cavia_porcellus
MGP_SPRETEiJ_G0016200	Ddx50	82	92.473	ENSCCAG00000030543	DDX50	90	92.473	Cebus_capucinus
MGP_SPRETEiJ_G0016200	Ddx50	99	64.595	ENSCATG00000039259	-	89	65.492	Cercocebus_atys
MGP_SPRETEiJ_G0016200	Ddx50	92	92.762	ENSCATG00000032463	DDX50	92	92.171	Cercocebus_atys
MGP_SPRETEiJ_G0016200	Ddx50	98	70.180	ENSCATG00000035153	-	89	88.401	Cercocebus_atys
MGP_SPRETEiJ_G0016200	Ddx50	100	95.924	ENSCLAG00000012957	-	100	95.924	Chinchilla_lanigera
MGP_SPRETEiJ_G0016200	Ddx50	97	69.014	ENSCLAG00000001938	-	91	69.124	Chinchilla_lanigera
MGP_SPRETEiJ_G0016200	Ddx50	50	86.179	ENSCLAG00000001553	-	79	87.742	Chinchilla_lanigera
MGP_SPRETEiJ_G0016200	Ddx50	92	95.575	ENSCSAG00000007703	DDX50	92	94.985	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0016200	Ddx50	88	92.604	ENSCHOG00000000233	DDX50	97	92.142	Choloepus_hoffmanni
MGP_SPRETEiJ_G0016200	Ddx50	96	66.246	ENSCANG00000028077	-	91	65.689	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0016200	Ddx50	86	70.820	ENSCANG00000018820	-	88	71.130	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0016200	Ddx50	100	81.954	ENSCANG00000036450	-	100	81.954	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0016200	Ddx50	100	97.418	ENSCGRG00001020223	Ddx50	100	97.418	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0016200	Ddx50	100	97.147	ENSCGRG00000015884	Ddx50	100	97.147	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0016200	Ddx50	87	88.099	ENSDNOG00000001675	DDX50	100	88.099	Dasypus_novemcinctus
MGP_SPRETEiJ_G0016200	Ddx50	92	95.280	ENSDORG00000007310	Ddx50	92	94.838	Dipodomys_ordii
MGP_SPRETEiJ_G0016200	Ddx50	90	97.124	ENSETEG00000014069	DDX50	90	97.124	Echinops_telfairi
MGP_SPRETEiJ_G0016200	Ddx50	93	94.575	ENSEASG00005015595	DDX50	92	94.100	Equus_asinus_asinus
MGP_SPRETEiJ_G0016200	Ddx50	93	94.575	ENSECAG00000023044	DDX50	92	94.100	Equus_caballus
MGP_SPRETEiJ_G0016200	Ddx50	86	95.833	ENSEEUG00000005782	DDX50	79	97.477	Erinaceus_europaeus
MGP_SPRETEiJ_G0016200	Ddx50	92	95.140	ENSFCAG00000012678	DDX50	92	94.551	Felis_catus
MGP_SPRETEiJ_G0016200	Ddx50	92	88.496	ENSFDAG00000016109	-	91	87.758	Fukomys_damarensis
MGP_SPRETEiJ_G0016200	Ddx50	51	81.481	ENSGGOG00000041063	-	82	83.699	Gorilla_gorilla
MGP_SPRETEiJ_G0016200	Ddx50	52	70.312	ENSGGOG00000022568	-	91	78.154	Gorilla_gorilla
MGP_SPRETEiJ_G0016200	Ddx50	92	95.575	ENSGGOG00000010100	DDX50	99	97.861	Gorilla_gorilla
MGP_SPRETEiJ_G0016200	Ddx50	92	93.805	ENSHGLG00000013466	DDX50	92	93.215	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0016200	Ddx50	92	93.805	ENSHGLG00100017191	DDX50	92	93.215	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0016200	Ddx50	82	86.702	ENSHGLG00100006568	-	92	86.702	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0016200	Ddx50	100	93.902	ENSSTOG00000021852	-	92	93.078	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0016200	Ddx50	100	72.838	ENSJJAG00000019626	-	91	73.494	Jaculus_jaculus
MGP_SPRETEiJ_G0016200	Ddx50	100	94.158	ENSJJAG00000023928	-	92	93.796	Jaculus_jaculus
MGP_SPRETEiJ_G0016200	Ddx50	92	95.575	ENSLAFG00000006186	DDX50	92	94.985	Loxodonta_africana
MGP_SPRETEiJ_G0016200	Ddx50	98	70.556	ENSMFAG00000045339	-	89	87.774	Macaca_fascicularis
MGP_SPRETEiJ_G0016200	Ddx50	92	95.575	ENSMFAG00000044067	DDX50	92	94.985	Macaca_fascicularis
MGP_SPRETEiJ_G0016200	Ddx50	92	95.575	ENSMMUG00000001006	DDX50	100	96.429	Macaca_mulatta
MGP_SPRETEiJ_G0016200	Ddx50	80	67.288	ENSMMUG00000045343	-	90	59.882	Macaca_mulatta
MGP_SPRETEiJ_G0016200	Ddx50	92	88.643	ENSMNEG00000031664	DDX50	92	88.053	Macaca_nemestrina
MGP_SPRETEiJ_G0016200	Ddx50	98	70.994	ENSMNEG00000045530	-	89	88.715	Macaca_nemestrina
MGP_SPRETEiJ_G0016200	Ddx50	86	83.411	ENSMLEG00000041988	-	89	86.822	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0016200	Ddx50	92	93.658	ENSMLEG00000037313	DDX50	92	93.068	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0016200	Ddx50	56	95.631	ENSMAUG00000022192	Ddx50	100	94.903	Mesocricetus_auratus
MGP_SPRETEiJ_G0016200	Ddx50	100	88.451	ENSMICG00000017539	DDX50	100	88.451	Microcebus_murinus
MGP_SPRETEiJ_G0016200	Ddx50	100	96.612	ENSMOCG00000001676	Ddx50	100	96.612	Microtus_ochrogaster
MGP_SPRETEiJ_G0016200	Ddx50	92	79.941	ENSMODG00000010741	DDX50	92	79.971	Monodelphis_domestica
MGP_SPRETEiJ_G0016200	Ddx50	100	99.455	MGP_CAROLIEiJ_G0015389	Ddx50	100	99.455	Mus_caroli
MGP_SPRETEiJ_G0016200	Ddx50	100	100.000	ENSMUSG00000020076	Ddx50	100	100.000	Mus_musculus
MGP_SPRETEiJ_G0016200	Ddx50	100	99.591	MGP_PahariEiJ_G0030805	Ddx50	100	99.591	Mus_pahari
MGP_SPRETEiJ_G0016200	Ddx50	88	94.590	ENSMPUG00000004589	DDX50	99	94.590	Mustela_putorius_furo
MGP_SPRETEiJ_G0016200	Ddx50	92	92.773	ENSMLUG00000017590	DDX50	92	92.183	Myotis_lucifugus
MGP_SPRETEiJ_G0016200	Ddx50	100	96.875	ENSNGAG00000004283	Ddx50	100	96.875	Nannospalax_galili
MGP_SPRETEiJ_G0016200	Ddx50	88	66.718	ENSNLEG00000035506	-	88	77.570	Nomascus_leucogenys
MGP_SPRETEiJ_G0016200	Ddx50	92	95.575	ENSNLEG00000011631	DDX50	92	94.838	Nomascus_leucogenys
MGP_SPRETEiJ_G0016200	Ddx50	92	93.205	ENSOPRG00000001619	DDX50	92	93.353	Ochotona_princeps
MGP_SPRETEiJ_G0016200	Ddx50	100	95.380	ENSODEG00000014597	-	100	95.380	Octodon_degus
MGP_SPRETEiJ_G0016200	Ddx50	93	67.001	ENSOANG00000004776	DDX50	80	68.976	Ornithorhynchus_anatinus
MGP_SPRETEiJ_G0016200	Ddx50	100	91.033	ENSOCUG00000002879	DDX50	95	94.387	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0016200	Ddx50	92	94.985	ENSOGAG00000001844	DDX50	92	94.395	Otolemur_garnettii
MGP_SPRETEiJ_G0016200	Ddx50	100	94.980	ENSOARG00000005264	DDX50	92	94.543	Ovis_aries
MGP_SPRETEiJ_G0016200	Ddx50	52	70.263	ENSPPAG00000026788	-	90	78.193	Pan_paniscus
MGP_SPRETEiJ_G0016200	Ddx50	92	95.428	ENSPPAG00000040723	DDX50	92	94.690	Pan_paniscus
MGP_SPRETEiJ_G0016200	Ddx50	92	95.140	ENSPPRG00000015826	DDX50	92	94.551	Panthera_pardus
MGP_SPRETEiJ_G0016200	Ddx50	92	95.140	ENSPTIG00000008454	DDX50	92	94.551	Panthera_tigris_altaica
MGP_SPRETEiJ_G0016200	Ddx50	52	70.263	ENSPTRG00000044913	-	99	71.053	Pan_troglodytes
MGP_SPRETEiJ_G0016200	Ddx50	92	95.428	ENSPTRG00000002562	DDX50	92	94.690	Pan_troglodytes
MGP_SPRETEiJ_G0016200	Ddx50	92	87.758	ENSPANG00000022143	-	92	87.168	Papio_anubis
MGP_SPRETEiJ_G0016200	Ddx50	92	95.569	ENSPEMG00000020899	-	92	95.126	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0016200	Ddx50	98	75.620	ENSPCIG00000016036	DDX50	94	79.148	Phascolarctos_cinereus
MGP_SPRETEiJ_G0016200	Ddx50	91	96.429	ENSPPYG00000002390	DDX50	100	96.429	Pongo_abelii
MGP_SPRETEiJ_G0016200	Ddx50	84	80.163	ENSPCAG00000009692	DDX50	100	80.163	Procavia_capensis
MGP_SPRETEiJ_G0016200	Ddx50	79	84.526	ENSPCOG00000012574	DDX50	88	84.526	Propithecus_coquereli
MGP_SPRETEiJ_G0016200	Ddx50	86	90.083	ENSPVAG00000009519	DDX50	78	90.358	Pteropus_vampyrus
MGP_SPRETEiJ_G0016200	Ddx50	100	99.046	ENSRNOG00000000396	Ddx50	100	99.046	Rattus_norvegicus
MGP_SPRETEiJ_G0016200	Ddx50	87	93.779	ENSRBIG00000042841	-	98	96.048	Rhinopithecus_bieti
MGP_SPRETEiJ_G0016200	Ddx50	99	66.393	ENSRBIG00000036573	-	92	66.071	Rhinopithecus_bieti
MGP_SPRETEiJ_G0016200	Ddx50	99	64.363	ENSRBIG00000039673	-	90	63.529	Rhinopithecus_bieti
MGP_SPRETEiJ_G0016200	Ddx50	92	95.428	ENSRROG00000032158	DDX50	100	96.285	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0016200	Ddx50	52	68.930	ENSRROG00000031940	-	87	73.846	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0016200	Ddx50	99	63.673	ENSRROG00000022853	-	91	63.111	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0016200	Ddx50	92	84.071	ENSSBOG00000014441	DDX50	99	84.762	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0016200	Ddx50	79	67.613	ENSSHAG00000005334	-	80	67.423	Sarcophilus_harrisii
MGP_SPRETEiJ_G0016200	Ddx50	88	80.458	ENSSHAG00000005690	DDX50	91	80.395	Sarcophilus_harrisii
MGP_SPRETEiJ_G0016200	Ddx50	100	78.125	ENSSARG00000013553	DDX50	88	84.783	Sorex_araneus
MGP_SPRETEiJ_G0016200	Ddx50	100	93.894	ENSSSCG00000010246	DDX50	92	93.363	Sus_scrofa
MGP_SPRETEiJ_G0016200	Ddx50	96	73.521	ENSTBEG00000001085	DDX50	92	72.378	Tupaia_belangeri
MGP_SPRETEiJ_G0016200	Ddx50	100	88.195	ENSTTRG00000012408	DDX50	99	88.195	Tursiops_truncatus
MGP_SPRETEiJ_G0016200	Ddx50	93	94.729	ENSUAMG00000010976	DDX50	99	97.782	Ursus_americanus
MGP_SPRETEiJ_G0016200	Ddx50	93	94.729	ENSUMAG00000007726	DDX50	92	94.109	Ursus_maritimus
MGP_SPRETEiJ_G0016200	Ddx50	92	94.100	ENSVPAG00000000626	DDX50	92	93.658	Vicugna_pacos
MGP_SPRETEiJ_G0016200	Ddx50	82	89.386	ENSVVUG00000020366	DDX50	98	97.594	Vulpes_vulpes