EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0016321 (Gene tree)
Gene ID: -
Gene Symbol: Rrp1
Alias: NNP-1|Nnp1
Full Name: ribosomal RNA processing 1 homolog (S. cerevisiae)
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Minus strand
Length: 12544 bases
Position: chr10:77394723-77407266
Accession: 1203500
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0024809	Nop52	PF05997.12	8.3e-69	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0024809	-	2010	-	MGP_SPRETEiJ_P0024809	494 (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0016321's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0016321's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_SPRETEiJ_G0016321	Rrp1	57	53.913	MGP_SPRETEiJ_G0022290	Rrp1b	53	65.079

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0016321	Rrp1	98	60.870	ENSG00000160214	RRP1	96	86.047	Homo_sapiens
MGP_SPRETEiJ_G0016321	Rrp1	94	40.380	ENSAMEG00000011401	RRP1B	54	53.846	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0016321	Rrp1	98	58.449	ENSAMEG00000011448	RRP1	98	80.080	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0016321	Rrp1	76	54.032	ENSAOCG00000017894	-	68	62.712	Amphiprion_ocellaris
MGP_SPRETEiJ_G0016321	Rrp1	82	64.198	ENSANAG00000037815	RRP1	93	81.200	Aotus_nancymaae
MGP_SPRETEiJ_G0016321	Rrp1	79	81.223	ENSBTAG00000003981	RRP1	96	76.378	Bos_taurus
MGP_SPRETEiJ_G0016321	Rrp1	51	31.873	WBGene00008151	C47E12.7	57	32.218	Caenorhabditis_elegans
MGP_SPRETEiJ_G0016321	Rrp1	91	63.946	ENSCJAG00000043205	RRP1	87	80.800	Callithrix_jacchus
MGP_SPRETEiJ_G0016321	Rrp1	99	60.121	ENSCAFG00000010646	RRP1	55	80.800	Canis_familiaris
MGP_SPRETEiJ_G0016321	Rrp1	99	57.534	ENSCAFG00020018979	RRP1	55	80.800	Canis_lupus_dingo
MGP_SPRETEiJ_G0016321	Rrp1	85	42.254	ENSCAFG00020018901	RRP1B	53	56.667	Canis_lupus_dingo
MGP_SPRETEiJ_G0016321	Rrp1	79	81.659	ENSCHIG00000020948	RRP1	91	81.013	Capra_hircus
MGP_SPRETEiJ_G0016321	Rrp1	79	41.495	ENSCHIG00000021519	RRP1B	54	53.750	Capra_hircus
MGP_SPRETEiJ_G0016321	Rrp1	99	56.078	ENSTSYG00000012831	RRP1	97	77.132	Carlito_syrichta
MGP_SPRETEiJ_G0016321	Rrp1	85	55.687	ENSCAPG00000008576	RRP1	97	53.394	Cavia_aperea
MGP_SPRETEiJ_G0016321	Rrp1	98	57.600	ENSCPOG00000038986	RRP1	98	57.400	Cavia_porcellus
MGP_SPRETEiJ_G0016321	Rrp1	99	60.736	ENSCCAG00000029828	RRP1	99	81.200	Cebus_capucinus
MGP_SPRETEiJ_G0016321	Rrp1	64	83.691	ENSCATG00000015632	RRP1	96	79.528	Cercocebus_atys
MGP_SPRETEiJ_G0016321	Rrp1	98	59.754	ENSCLAG00000011639	RRP1	98	59.118	Chinchilla_lanigera
MGP_SPRETEiJ_G0016321	Rrp1	78	66.062	ENSCSAG00000007936	RRP1	100	79.681	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0016321	Rrp1	80	49.367	ENSCPBG00000010310	RRP1B	52	59.813	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0016321	Rrp1	56	40.385	ENSCING00000003304	-	69	40.385	Ciona_intestinalis
MGP_SPRETEiJ_G0016321	Rrp1	90	56.629	ENSCANG00000042611	RRP1	83	55.580	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0016321	Rrp1	98	74.948	ENSCGRG00001011920	Rrp1	97	73.706	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0016321	Rrp1	78	43.490	ENSCGRG00001023882	-	55	66.667	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0016321	Rrp1	98	74.948	ENSCGRG00000008915	Rrp1	97	73.706	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0016321	Rrp1	84	43.571	ENSCSEG00000020711	-	64	53.252	Cynoglossus_semilaevis
MGP_SPRETEiJ_G0016321	Rrp1	63	58.333	ENSCVAG00000017568	-	80	58.333	Cyprinodon_variegatus
MGP_SPRETEiJ_G0016321	Rrp1	73	48.014	ENSDARG00000103337	rrp1	53	49.398	Danio_rerio
MGP_SPRETEiJ_G0016321	Rrp1	100	56.262	ENSDNOG00000019880	RRP1	96	78.000	Dasypus_novemcinctus
MGP_SPRETEiJ_G0016321	Rrp1	89	59.956	ENSDORG00000002104	Rrp1	97	60.619	Dipodomys_ordii
MGP_SPRETEiJ_G0016321	Rrp1	57	75.758	ENSETEG00000002963	-	67	75.758	Echinops_telfairi
MGP_SPRETEiJ_G0016321	Rrp1	80	79.913	ENSEASG00005001673	RRP1	97	76.400	Equus_asinus_asinus
MGP_SPRETEiJ_G0016321	Rrp1	80	79.913	ENSECAG00000015703	RRP1	99	76.800	Equus_caballus
MGP_SPRETEiJ_G0016321	Rrp1	72	53.252	ENSELUG00000015885	-	84	55.000	Esox_lucius
MGP_SPRETEiJ_G0016321	Rrp1	69	56.735	ENSFCAG00000010272	RRP1B	50	57.500	Felis_catus
MGP_SPRETEiJ_G0016321	Rrp1	78	82.479	ENSFCAG00000008434	RRP1	98	79.839	Felis_catus
MGP_SPRETEiJ_G0016321	Rrp1	89	80.000	ENSFDAG00000013728	RRP1	98	78.740	Fukomys_damarensis
MGP_SPRETEiJ_G0016321	Rrp1	69	59.664	ENSGALG00000035696	RRP1B	50	58.000	Gallus_gallus
MGP_SPRETEiJ_G0016321	Rrp1	80	43.687	ENSGACG00000001438	rrp1	50	56.667	Gasterosteus_aculeatus
MGP_SPRETEiJ_G0016321	Rrp1	98	60.870	ENSGGOG00000000173	RRP1	99	81.600	Gorilla_gorilla
MGP_SPRETEiJ_G0016321	Rrp1	83	39.762	ENSHGLG00000004968	RRP1B	56	53.947	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0016321	Rrp1	76	81.116	ENSHGLG00000017085	RRP1	91	80.000	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0016321	Rrp1	95	60.499	ENSSTOG00000011116	RRP1	96	81.526	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0016321	Rrp1	96	79.496	ENSJJAG00000018886	Rrp1	98	85.200	Jaculus_jaculus
MGP_SPRETEiJ_G0016321	Rrp1	94	43.617	ENSLAFG00000000766	RRP1B	91	55.814	Loxodonta_africana
MGP_SPRETEiJ_G0016321	Rrp1	99	56.513	ENSLAFG00000022901	RRP1	98	74.219	Loxodonta_africana
MGP_SPRETEiJ_G0016321	Rrp1	98	59.259	ENSMFAG00000003202	RRP1	97	77.992	Macaca_fascicularis
MGP_SPRETEiJ_G0016321	Rrp1	98	59.064	ENSMMUG00000012304	RRP1	96	78.824	Macaca_mulatta
MGP_SPRETEiJ_G0016321	Rrp1	98	58.674	ENSMNEG00000031210	RRP1	95	80.000	Macaca_nemestrina
MGP_SPRETEiJ_G0016321	Rrp1	75	64.516	ENSMLEG00000037797	RRP1	94	80.569	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0016321	Rrp1	69	59.746	ENSMGAG00000014591	RRP1B	51	58.000	Meleagris_gallopavo
MGP_SPRETEiJ_G0016321	Rrp1	83	73.563	ENSMAUG00000017653	Rrp1	98	60.986	Mesocricetus_auratus
MGP_SPRETEiJ_G0016321	Rrp1	99	61.122	ENSMICG00000004700	RRP1	99	79.762	Microcebus_murinus
MGP_SPRETEiJ_G0016321	Rrp1	99	67.748	ENSMOCG00000015687	Rrp1	99	63.465	Microtus_ochrogaster
MGP_SPRETEiJ_G0016321	Rrp1	78	40.000	ENSMOCG00000001117	Rrp1b	55	51.064	Microtus_ochrogaster
MGP_SPRETEiJ_G0016321	Rrp1	83	39.518	ENSMMOG00000019175	rrp1	75	62.712	Mola_mola
MGP_SPRETEiJ_G0016321	Rrp1	60	66.245	ENSMODG00000021036	-	50	62.992	Monodelphis_domestica
MGP_SPRETEiJ_G0016321	Rrp1	71	58.333	ENSMALG00000010310	rrp1	80	58.333	Monopterus_albus
MGP_SPRETEiJ_G0016321	Rrp1	57	51.739	MGP_CAROLIEiJ_G0021376	Rrp1b	53	63.492	Mus_caroli
MGP_SPRETEiJ_G0016321	Rrp1	100	96.761	MGP_CAROLIEiJ_G0015508	Rrp1	100	96.761	Mus_caroli
MGP_SPRETEiJ_G0016321	Rrp1	100	98.785	ENSMUSG00000061032	Rrp1	100	98.785	Mus_musculus
MGP_SPRETEiJ_G0016321	Rrp1	56	53.043	ENSMUSG00000058392	Rrp1b	53	65.079	Mus_musculus
MGP_SPRETEiJ_G0016321	Rrp1	100	91.734	MGP_PahariEiJ_G0030921	Rrp1	100	93.952	Mus_pahari
MGP_SPRETEiJ_G0016321	Rrp1	57	53.478	MGP_PahariEiJ_G0023695	Rrp1b	53	63.492	Mus_pahari
MGP_SPRETEiJ_G0016321	Rrp1	94	61.555	ENSMPUG00000009826	RRP1	52	80.632	Mustela_putorius_furo
MGP_SPRETEiJ_G0016321	Rrp1	98	61.647	ENSMLUG00000017788	RRP1	98	59.677	Myotis_lucifugus
MGP_SPRETEiJ_G0016321	Rrp1	98	56.327	ENSNGAG00000022344	Rrp1	99	55.102	Nannospalax_galili
MGP_SPRETEiJ_G0016321	Rrp1	90	61.354	ENSNLEG00000034734	RRP1	99	79.600	Nomascus_leucogenys
MGP_SPRETEiJ_G0016321	Rrp1	63	71.795	ENSOPRG00000001319	RRP1	97	71.146	Ochotona_princeps
MGP_SPRETEiJ_G0016321	Rrp1	77	53.298	ENSOANG00000006472	-	94	65.833	Ornithorhynchus_anatinus
MGP_SPRETEiJ_G0016321	Rrp1	90	61.435	ENSOGAG00000006105	RRP1	94	78.346	Otolemur_garnettii
MGP_SPRETEiJ_G0016321	Rrp1	79	82.096	ENSOARG00000011434	RRP1	91	81.435	Ovis_aries
MGP_SPRETEiJ_G0016321	Rrp1	70	40.058	ENSOARG00000011314	RRP1B	52	53.202	Ovis_aries
MGP_SPRETEiJ_G0016321	Rrp1	98	61.077	ENSPPAG00000029050	RRP1	99	82.000	Pan_paniscus
MGP_SPRETEiJ_G0016321	Rrp1	78	82.051	ENSPPRG00000010656	RRP1	98	79.435	Panthera_pardus
MGP_SPRETEiJ_G0016321	Rrp1	70	64.249	ENSPTIG00000019473	RRP1	88	61.722	Panthera_tigris_altaica
MGP_SPRETEiJ_G0016321	Rrp1	98	61.284	ENSPTRG00000013962	RRP1	99	82.400	Pan_troglodytes
MGP_SPRETEiJ_G0016321	Rrp1	98	58.058	ENSPANG00000015097	RRP1	96	79.921	Papio_anubis
MGP_SPRETEiJ_G0016321	Rrp1	83	47.002	ENSPSIG00000008152	RRP1B	50	59.756	Pelodiscus_sinensis
MGP_SPRETEiJ_G0016321	Rrp1	67	50.000	ENSPMGG00000007512	-	79	50.000	Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0016321	Rrp1	98	71.311	ENSPEMG00000018421	Rrp1	98	88.800	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0016321	Rrp1	93	48.690	ENSPCIG00000015523	-	68	62.992	Phascolarctos_cinereus
MGP_SPRETEiJ_G0016321	Rrp1	66	55.702	ENSPMEG00000007042	-	50	54.098	Poecilia_mexicana
MGP_SPRETEiJ_G0016321	Rrp1	98	60.331	ENSPPYG00000011474	RRP1	99	80.800	Pongo_abelii
MGP_SPRETEiJ_G0016321	Rrp1	99	58.648	ENSPCOG00000017706	RRP1	99	80.952	Propithecus_coquereli
MGP_SPRETEiJ_G0016321	Rrp1	68	56.429	ENSPVAG00000009925	-	77	56.429	Pteropus_vampyrus
MGP_SPRETEiJ_G0016321	Rrp1	85	90.795	ENSRNOG00000001203	Rrp1	100	75.960	Rattus_norvegicus
MGP_SPRETEiJ_G0016321	Rrp1	98	57.588	ENSRBIG00000032082	RRP1	99	57.965	Rhinopithecus_bieti
MGP_SPRETEiJ_G0016321	Rrp1	98	57.588	ENSRROG00000039799	RRP1	99	56.979	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0016321	Rrp1	89	75.000	ENSSBOG00000034689	RRP1	98	79.200	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0016321	Rrp1	77	47.120	ENSSHAG00000010304	-	82	64.423	Sarcophilus_harrisii
MGP_SPRETEiJ_G0016321	Rrp1	82	42.716	ENSSMAG00000016847	-	76	53.846	Scophthalmus_maximus
MGP_SPRETEiJ_G0016321	Rrp1	98	44.153	ENSSSCG00000021698	RRP1B	60	54.878	Sus_scrofa
MGP_SPRETEiJ_G0016321	Rrp1	72	80.769	ENSSSCG00000037061	RRP1	96	77.778	Sus_scrofa
MGP_SPRETEiJ_G0016321	Rrp1	54	60.396	ENSTGUG00000005926	RRP1B	51	60.099	Taeniopygia_guttata
MGP_SPRETEiJ_G0016321	Rrp1	80	44.192	ENSTRUG00000017592	rrp1	85	57.627	Takifugu_rubripes
MGP_SPRETEiJ_G0016321	Rrp1	58	56.667	ENSTNIG00000005053	rrp1	50	56.667	Tetraodon_nigroviridis
MGP_SPRETEiJ_G0016321	Rrp1	56	69.032	ENSTBEG00000001260	-	58	68.276	Tupaia_belangeri
MGP_SPRETEiJ_G0016321	Rrp1	65	72.059	ENSTTRG00000011162	RRP1	83	72.059	Tursiops_truncatus
MGP_SPRETEiJ_G0016321	Rrp1	65	53.846	ENSTTRG00000000723	RRP1B	55	54.583	Tursiops_truncatus
MGP_SPRETEiJ_G0016321	Rrp1	74	49.479	ENSUAMG00000014189	-	97	76.336	Ursus_americanus
MGP_SPRETEiJ_G0016321	Rrp1	90	55.819	ENSUMAG00000025507	RRP1	98	78.836	Ursus_maritimus
MGP_SPRETEiJ_G0016321	Rrp1	76	40.584	ENSUMAG00000025510	RRP1B	51	56.158	Ursus_maritimus
MGP_SPRETEiJ_G0016321	Rrp1	71	48.518	ENSVVUG00000024498	-	78	49.189	Vulpes_vulpes
MGP_SPRETEiJ_G0016321	Rrp1	73	52.347	ENSXETG00000013683	rrp1b	63	56.098	Xenopus_tropicalis