EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0016356 (Gene tree)
Gene ID: -
Gene Symbol: Polrmt
Alias: 1110018N15Rik
Full Name: polymerase (RNA) mitochondrial (DNA directed)
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Minus strand
Length: 11760 bases
Position: chr10:78545597-78557356
Accession: 1915843
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0024882	RNA_pol	PF00940.19	8.1e-167	1	1
MGP_SPRETEiJ_P0024883	RNA_pol	PF00940.19	9.4e-167	1	1
MGP_SPRETEiJ_P0024879	RNA_pol	PF00940.19	3.2e-134	1	2
MGP_SPRETEiJ_P0024879	RNA_pol	PF00940.19	3.2e-134	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0024888	-	1215	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0024883	-	3755	-	MGP_SPRETEiJ_P0024883	1207 (aa)	-	-
MGP_SPRETEiJ_T0024882	-	3535	-	MGP_SPRETEiJ_P0024882	1133 (aa)	-	-
MGP_SPRETEiJ_T0024881	-	374	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0024880	-	3932	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0024887	-	652	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0024886	-	3749	-	MGP_SPRETEiJ_P0024886	903 (aa)	-	-
MGP_SPRETEiJ_T0024885	-	703	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0024884	-	395	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0024878	-	4285	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0024879	-	1287	-	MGP_SPRETEiJ_P0024879	392 (aa)	-	-
MGP_SPRETEiJ_T0024890	-	411	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0024889	-	602	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0016356's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0016356's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0016356	Polrmt	100	79.388	ENSG00000099821	POLRMT	94	79.388	Homo_sapiens
MGP_SPRETEiJ_G0016356	Polrmt	100	61.894	ENSAPOG00000003942	polrmt	75	63.016	Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0016356	Polrmt	100	78.720	ENSAMEG00000002745	POLRMT	94	78.720	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0016356	Polrmt	100	61.201	ENSACIG00000016078	polrmt	95	62.381	Amphilophus_citrinellus
MGP_SPRETEiJ_G0016356	Polrmt	100	62.356	ENSAOCG00000020208	polrmt	94	56.964	Amphiprion_ocellaris
MGP_SPRETEiJ_G0016356	Polrmt	100	62.587	ENSAPEG00000007949	polrmt	92	56.267	Amphiprion_percula
MGP_SPRETEiJ_G0016356	Polrmt	100	62.125	ENSATEG00000024025	polrmt	92	63.285	Anabas_testudineus
MGP_SPRETEiJ_G0016356	Polrmt	100	61.343	ENSAPLG00000003051	POLRMT	99	65.169	Anas_platyrhynchos
MGP_SPRETEiJ_G0016356	Polrmt	99	76.167	ENSANAG00000032916	POLRMT	94	76.167	Aotus_nancymaae
MGP_SPRETEiJ_G0016356	Polrmt	100	62.587	ENSACLG00000003766	polrmt	76	63.333	Astatotilapia_calliptera
MGP_SPRETEiJ_G0016356	Polrmt	99	61.746	ENSAMXG00000018258	polrmt	91	61.746	Astyanax_mexicanus
MGP_SPRETEiJ_G0016356	Polrmt	100	78.378	ENSBTAG00000015051	POLRMT	96	78.378	Bos_taurus
MGP_SPRETEiJ_G0016356	Polrmt	100	40.363	WBGene00013680	rpom-1	53	41.760	Caenorhabditis_elegans
MGP_SPRETEiJ_G0016356	Polrmt	99	74.879	ENSCJAG00000012913	POLRMT	94	74.879	Callithrix_jacchus
MGP_SPRETEiJ_G0016356	Polrmt	100	79.194	ENSCAFG00000019711	POLRMT	95	78.973	Canis_familiaris
MGP_SPRETEiJ_G0016356	Polrmt	100	79.194	ENSCAFG00020016843	POLRMT	95	78.973	Canis_lupus_dingo
MGP_SPRETEiJ_G0016356	Polrmt	100	78.617	ENSCHIG00000013267	POLRMT	94	78.617	Capra_hircus
MGP_SPRETEiJ_G0016356	Polrmt	94	72.068	ENSCAPG00000016900	POLRMT	100	71.914	Cavia_aperea
MGP_SPRETEiJ_G0016356	Polrmt	100	73.387	ENSCPOG00000023061	POLRMT	100	61.157	Cavia_porcellus
MGP_SPRETEiJ_G0016356	Polrmt	100	75.362	ENSCCAG00000025014	POLRMT	94	75.362	Cebus_capucinus
MGP_SPRETEiJ_G0016356	Polrmt	100	78.744	ENSCATG00000040393	POLRMT	94	78.744	Cercocebus_atys
MGP_SPRETEiJ_G0016356	Polrmt	100	70.901	ENSCLAG00000007473	POLRMT	76	76.774	Chinchilla_lanigera
MGP_SPRETEiJ_G0016356	Polrmt	100	78.583	ENSCSAG00000012942	POLRMT	94	78.583	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0016356	Polrmt	100	62.471	ENSCPBG00000009869	POLRMT	96	65.323	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0016356	Polrmt	62	49.174	ENSCING00000024450	-	100	49.174	Ciona_intestinalis
MGP_SPRETEiJ_G0016356	Polrmt	100	47.344	ENSCSAVG00000000440	-	99	44.064	Ciona_savignyi
MGP_SPRETEiJ_G0016356	Polrmt	100	78.100	ENSCANG00000038011	POLRMT	94	78.100	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0016356	Polrmt	100	82.643	ENSCGRG00001021311	Polrmt	100	84.839	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0016356	Polrmt	100	82.405	ENSCGRG00000011134	Polrmt	100	81.788	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0016356	Polrmt	100	60.739	ENSCSEG00000002734	polrmt	76	62.802	Cynoglossus_semilaevis
MGP_SPRETEiJ_G0016356	Polrmt	100	61.432	ENSCVAG00000005949	polrmt	97	57.081	Cyprinodon_variegatus
MGP_SPRETEiJ_G0016356	Polrmt	100	60.920	ENSDARG00000101220	polrmt	91	63.099	Danio_rerio
MGP_SPRETEiJ_G0016356	Polrmt	95	77.760	ENSDORG00000014125	Polrmt	99	77.760	Dipodomys_ordii
MGP_SPRETEiJ_G0016356	Polrmt	100	53.899	FBgn0261938	mtRNApol	72	55.981	Drosophila_melanogaster
MGP_SPRETEiJ_G0016356	Polrmt	100	70.900	ENSETEG00000003476	POLRMT	94	70.740	Echinops_telfairi
MGP_SPRETEiJ_G0016356	Polrmt	100	59.584	ENSEBUG00000013453	-	91	59.330	Eptatretus_burgeri
MGP_SPRETEiJ_G0016356	Polrmt	100	81.059	ENSEASG00005021493	POLRMT	94	81.059	Equus_asinus_asinus
MGP_SPRETEiJ_G0016356	Polrmt	100	81.059	ENSECAG00000032711	POLRMT	94	81.059	Equus_caballus
MGP_SPRETEiJ_G0016356	Polrmt	100	60.641	ENSELUG00000019319	polrmt	76	52.626	Esox_lucius
MGP_SPRETEiJ_G0016356	Polrmt	100	80.769	ENSFCAG00000018808	POLRMT	94	80.769	Felis_catus
MGP_SPRETEiJ_G0016356	Polrmt	80	65.226	ENSFALG00000013910	POLRMT	96	65.226	Ficedula_albicollis
MGP_SPRETEiJ_G0016356	Polrmt	100	75.645	ENSFDAG00000020312	POLRMT	100	58.728	Fukomys_damarensis
MGP_SPRETEiJ_G0016356	Polrmt	99	61.343	ENSFHEG00000021239	polrmt	86	56.006	Fundulus_heteroclitus
MGP_SPRETEiJ_G0016356	Polrmt	100	56.221	ENSGMOG00000011829	polrmt	97	60.766	Gadus_morhua
MGP_SPRETEiJ_G0016356	Polrmt	97	64.848	ENSGALG00000001377	POLRMT	93	65.008	Gallus_gallus
MGP_SPRETEiJ_G0016356	Polrmt	100	61.894	ENSGAFG00000003953	polrmt	95	58.405	Gambusia_affinis
MGP_SPRETEiJ_G0016356	Polrmt	100	57.834	ENSGACG00000012957	polrmt	97	60.450	Gasterosteus_aculeatus
MGP_SPRETEiJ_G0016356	Polrmt	100	62.356	ENSGAGG00000005522	POLRMT	96	65.705	Gopherus_agassizii
MGP_SPRETEiJ_G0016356	Polrmt	81	82.609	ENSGGOG00000023264	-	95	82.609	Gorilla_gorilla
MGP_SPRETEiJ_G0016356	Polrmt	100	62.587	ENSHBUG00000010005	polrmt	74	63.492	Haplochromis_burtoni
MGP_SPRETEiJ_G0016356	Polrmt	100	72.517	ENSHGLG00000019286	POLRMT	87	69.193	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0016356	Polrmt	100	76.129	ENSHGLG00100005762	POLRMT	100	63.648	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0016356	Polrmt	100	60.739	ENSHCOG00000001565	polrmt	94	65.358	Hippocampus_comes
MGP_SPRETEiJ_G0016356	Polrmt	100	61.839	ENSIPUG00000000789	polrmt	95	48.158	Ictalurus_punctatus
MGP_SPRETEiJ_G0016356	Polrmt	98	83.082	ENSSTOG00000003431	POLRMT	100	83.333	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0016356	Polrmt	99	76.935	ENSJJAG00000012916	Polrmt	99	76.726	Jaculus_jaculus
MGP_SPRETEiJ_G0016356	Polrmt	100	60.460	ENSKMAG00000004426	polrmt	92	60.918	Kryptolebias_marmoratus
MGP_SPRETEiJ_G0016356	Polrmt	100	61.894	ENSLBEG00000016529	polrmt	77	57.163	Labrus_bergylta
MGP_SPRETEiJ_G0016356	Polrmt	99	61.201	ENSLACG00000011518	POLRMT	95	63.116	Latimeria_chalumnae
MGP_SPRETEiJ_G0016356	Polrmt	99	52.456	ENSLOCG00000005222	polrmt	91	52.456	Lepisosteus_oculatus
MGP_SPRETEiJ_G0016356	Polrmt	99	78.205	ENSLAFG00000001860	POLRMT	94	78.205	Loxodonta_africana
MGP_SPRETEiJ_G0016356	Polrmt	100	79.066	ENSMFAG00000031466	POLRMT	94	79.066	Macaca_fascicularis
MGP_SPRETEiJ_G0016356	Polrmt	100	78.744	ENSMNEG00000039129	POLRMT	94	78.744	Macaca_nemestrina
MGP_SPRETEiJ_G0016356	Polrmt	82	85.366	ENSMLEG00000037404	POLRMT	99	79.272	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0016356	Polrmt	100	62.125	ENSMAMG00000019284	polrmt	75	63.141	Mastacembelus_armatus
MGP_SPRETEiJ_G0016356	Polrmt	100	62.587	ENSMZEG00005009932	polrmt	76	63.333	Maylandia_zebra
MGP_SPRETEiJ_G0016356	Polrmt	100	61.432	ENSMGAG00000003243	POLRMT	96	64.687	Meleagris_gallopavo
MGP_SPRETEiJ_G0016356	Polrmt	100	88.604	ENSMAUG00000019392	Polrmt	100	88.604	Mesocricetus_auratus
MGP_SPRETEiJ_G0016356	Polrmt	100	81.129	ENSMICG00000016701	POLRMT	94	81.129	Microcebus_murinus
MGP_SPRETEiJ_G0016356	Polrmt	100	85.623	ENSMOCG00000008868	Polrmt	100	80.446	Microtus_ochrogaster
MGP_SPRETEiJ_G0016356	Polrmt	89	57.895	ENSMMOG00000000705	polrmt	90	57.895	Mola_mola
MGP_SPRETEiJ_G0016356	Polrmt	99	66.613	ENSMODG00000006478	POLRMT	95	66.613	Monodelphis_domestica
MGP_SPRETEiJ_G0016356	Polrmt	100	61.201	ENSMALG00000021224	polrmt	77	55.832	Monopterus_albus
MGP_SPRETEiJ_G0016356	Polrmt	100	97.913	MGP_CAROLIEiJ_G0015538	Polrmt	100	97.913	Mus_caroli
MGP_SPRETEiJ_G0016356	Polrmt	100	99.490	ENSMUSG00000020329	Polrmt	100	99.337	Mus_musculus
MGP_SPRETEiJ_G0016356	Polrmt	100	96.629	MGP_PahariEiJ_G0030951	Polrmt	100	96.629	Mus_pahari
MGP_SPRETEiJ_G0016356	Polrmt	100	79.032	ENSMPUG00000009910	POLRMT	94	78.812	Mustela_putorius_furo
MGP_SPRETEiJ_G0016356	Polrmt	100	72.286	ENSMLUG00000009223	POLRMT	100	68.956	Myotis_lucifugus
MGP_SPRETEiJ_G0016356	Polrmt	100	88.122	ENSNGAG00000005498	Polrmt	100	88.387	Nannospalax_galili
MGP_SPRETEiJ_G0016356	Polrmt	97	62.708	ENSNBRG00000023530	polrmt	73	65.653	Neolamprologus_brichardi
MGP_SPRETEiJ_G0016356	Polrmt	100	71.198	ENSNLEG00000000718	POLRMT	100	65.484	Nomascus_leucogenys
MGP_SPRETEiJ_G0016356	Polrmt	84	74.595	ENSOPRG00000013579	POLRMT	68	77.932	Ochotona_princeps
MGP_SPRETEiJ_G0016356	Polrmt	100	62.356	ENSONIG00000002405	polrmt	97	63.622	Oreochromis_niloticus
MGP_SPRETEiJ_G0016356	Polrmt	100	62.673	ENSORLG00000004329	polrmt	90	63.074	Oryzias_latipes
MGP_SPRETEiJ_G0016356	Polrmt	100	62.442	ENSORLG00020003896	polrmt	92	64.796	Oryzias_latipes_hni
MGP_SPRETEiJ_G0016356	Polrmt	100	62.442	ENSORLG00015022238	polrmt	90	63.074	Oryzias_latipes_hsok
MGP_SPRETEiJ_G0016356	Polrmt	100	63.279	ENSOMEG00000008292	polrmt	92	64.127	Oryzias_melastigma
MGP_SPRETEiJ_G0016356	Polrmt	100	82.022	ENSOGAG00000007912	POLRMT	94	82.022	Otolemur_garnettii
MGP_SPRETEiJ_G0016356	Polrmt	100	69.615	ENSOARG00000008898	POLRMT	92	77.226	Ovis_aries
MGP_SPRETEiJ_G0016356	Polrmt	100	76.726	ENSPPAG00000030853	POLRMT	94	76.726	Pan_paniscus
MGP_SPRETEiJ_G0016356	Polrmt	100	67.972	ENSPPAG00000043321	-	99	63.401	Pan_paniscus
MGP_SPRETEiJ_G0016356	Polrmt	100	72.414	ENSPPRG00000001547	POLRMT	93	79.053	Panthera_pardus
MGP_SPRETEiJ_G0016356	Polrmt	100	68.203	ENSPTRG00000039638	-	99	63.570	Pan_troglodytes
MGP_SPRETEiJ_G0016356	Polrmt	100	77.617	ENSPTRG00000010157	POLRMT	90	77.617	Pan_troglodytes
MGP_SPRETEiJ_G0016356	Polrmt	100	78.744	ENSPANG00000006649	POLRMT	94	78.744	Papio_anubis
MGP_SPRETEiJ_G0016356	Polrmt	100	60.508	ENSPKIG00000024580	polrmt	92	62.222	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0016356	Polrmt	100	60.739	ENSPMGG00000014627	polrmt	84	62.063	Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0016356	Polrmt	100	89.727	ENSPEMG00000011671	Polrmt	100	89.727	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0016356	Polrmt	70	65.532	ENSPMAG00000005070	-	100	65.532	Petromyzon_marinus
MGP_SPRETEiJ_G0016356	Polrmt	100	65.865	ENSPCIG00000006103	POLRMT	96	65.865	Phascolarctos_cinereus
MGP_SPRETEiJ_G0016356	Polrmt	100	61.201	ENSPFOG00000003911	polrmt	100	56.445	Poecilia_formosa
MGP_SPRETEiJ_G0016356	Polrmt	84	58.188	ENSPLAG00000005743	polrmt	93	58.188	Poecilia_latipinna
MGP_SPRETEiJ_G0016356	Polrmt	100	61.201	ENSPMEG00000008947	polrmt	98	57.300	Poecilia_mexicana
MGP_SPRETEiJ_G0016356	Polrmt	92	40.044	ENSPMEG00000011484	polrmt	95	51.095	Poecilia_mexicana
MGP_SPRETEiJ_G0016356	Polrmt	100	61.432	ENSPREG00000007650	polrmt	95	58.689	Poecilia_reticulata
MGP_SPRETEiJ_G0016356	Polrmt	93	79.344	ENSPPYG00000009282	POLRMT	100	75.417	Pongo_abelii
MGP_SPRETEiJ_G0016356	Polrmt	100	65.113	ENSPCAG00000010816	POLRMT	94	65.113	Procavia_capensis
MGP_SPRETEiJ_G0016356	Polrmt	100	75.161	ENSPCOG00000014539	POLRMT	94	75.161	Propithecus_coquereli
MGP_SPRETEiJ_G0016356	Polrmt	100	77.456	ENSPVAG00000008403	POLRMT	94	77.456	Pteropus_vampyrus
MGP_SPRETEiJ_G0016356	Polrmt	100	62.587	ENSPNYG00000020790	polrmt	74	63.333	Pundamilia_nyererei
MGP_SPRETEiJ_G0016356	Polrmt	100	61.609	ENSPNAG00000019790	polrmt	90	65.358	Pygocentrus_nattereri
MGP_SPRETEiJ_G0016356	Polrmt	100	88.981	ENSRNOG00000024879	Polrmt	100	88.981	Rattus_norvegicus
MGP_SPRETEiJ_G0016356	Polrmt	100	78.100	ENSRBIG00000006728	POLRMT	94	78.100	Rhinopithecus_bieti
MGP_SPRETEiJ_G0016356	Polrmt	100	78.261	ENSRROG00000040809	POLRMT	94	78.261	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0016356	Polrmt	99	74.557	ENSSBOG00000025388	POLRMT	94	74.557	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0016356	Polrmt	100	60.690	ENSSHAG00000009387	-	100	59.164	Sarcophilus_harrisii
MGP_SPRETEiJ_G0016356	Polrmt	100	61.432	ENSSFOG00015005074	polrmt	96	63.233	Scleropages_formosus
MGP_SPRETEiJ_G0016356	Polrmt	100	62.156	ENSSMAG00000011851	polrmt	92	63.191	Scophthalmus_maximus
MGP_SPRETEiJ_G0016356	Polrmt	100	61.663	ENSSDUG00000004410	polrmt	93	61.587	Seriola_dumerili
MGP_SPRETEiJ_G0016356	Polrmt	100	61.663	ENSSLDG00000010643	polrmt	93	61.746	Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0016356	Polrmt	70	58.484	ENSSPUG00000009181	-	100	58.885	Sphenodon_punctatus
MGP_SPRETEiJ_G0016356	Polrmt	100	62.356	ENSSPAG00000018740	polrmt	75	63.333	Stegastes_partitus
MGP_SPRETEiJ_G0016356	Polrmt	100	77.316	ENSSSCG00000035693	POLRMT	94	77.316	Sus_scrofa
MGP_SPRETEiJ_G0016356	Polrmt	100	62.673	ENSTGUG00000000621	POLRMT	100	63.497	Taeniopygia_guttata
MGP_SPRETEiJ_G0016356	Polrmt	100	60.046	ENSTRUG00000018040	polrmt	91	64.200	Takifugu_rubripes
MGP_SPRETEiJ_G0016356	Polrmt	100	61.556	ENSTNIG00000010642	polrmt	93	62.780	Tetraodon_nigroviridis
MGP_SPRETEiJ_G0016356	Polrmt	67	67.993	ENSTBEG00000001819	-	89	82.059	Tupaia_belangeri
MGP_SPRETEiJ_G0016356	Polrmt	75	74.184	ENSTTRG00000011329	POLRMT	65	79.529	Tursiops_truncatus
MGP_SPRETEiJ_G0016356	Polrmt	100	79.839	ENSUAMG00000019616	POLRMT	93	82.149	Ursus_americanus
MGP_SPRETEiJ_G0016356	Polrmt	96	73.710	ENSVVUG00000022627	POLRMT	92	73.710	Vulpes_vulpes
MGP_SPRETEiJ_G0016356	Polrmt	100	63.134	ENSXETG00000006545	polrmt	91	65.280	Xenopus_tropicalis
MGP_SPRETEiJ_G0016356	Polrmt	100	62.125	ENSXMAG00000012464	polrmt	96	56.474	Xiphophorus_maculatus