EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0016381 (Gene tree)
Gene ID: -
Gene Symbol: Sbno2
Alias: Stno
Full Name: strawberry notch 2
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Minus strand
Length: 50953 bases
Position: chr10:78899520-78950472
Accession: 2448490
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0024988	ResIII	PF04851.15	1.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0024988	-	4652	-	MGP_SPRETEiJ_P0024988	1348 (aa)	-	-
MGP_SPRETEiJ_T0024987	-	3962	-	MGP_SPRETEiJ_P0024987	1262 (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0016381's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0016381's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_SPRETEiJ_G0016381	Sbno2	75	68.254	MGP_SPRETEiJ_G0028747	Sbno1	95	68.860

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0016381	Sbno2	100	81.465	ENSG00000064932	SBNO2	97	84.041	Homo_sapiens
MGP_SPRETEiJ_G0016381	Sbno2	94	66.993	ENSAPOG00000003185	si:ch73-63e15.2	88	67.941	Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0016381	Sbno2	94	66.748	ENSAOCG00000016581	si:ch73-63e15.2	93	69.958	Amphiprion_ocellaris
MGP_SPRETEiJ_G0016381	Sbno2	94	66.667	ENSAPEG00000008862	si:ch73-63e15.2	75	69.304	Amphiprion_percula
MGP_SPRETEiJ_G0016381	Sbno2	94	66.694	ENSATEG00000023838	si:ch73-63e15.2	93	71.039	Anabas_testudineus
MGP_SPRETEiJ_G0016381	Sbno2	92	74.723	ENSAPLG00000007158	SBNO2	100	70.516	Anas_platyrhynchos
MGP_SPRETEiJ_G0016381	Sbno2	100	80.337	ENSANAG00000026685	SBNO2	99	81.336	Aotus_nancymaae
MGP_SPRETEiJ_G0016381	Sbno2	95	66.417	ENSACLG00000005090	si:ch73-63e15.2	75	66.529	Astatotilapia_calliptera
MGP_SPRETEiJ_G0016381	Sbno2	97	65.648	ENSAMXG00000015881	si:ch73-63e15.2	82	69.197	Astyanax_mexicanus
MGP_SPRETEiJ_G0016381	Sbno2	94	66.226	ENSAMXG00000018868	sbno2a	97	69.386	Astyanax_mexicanus
MGP_SPRETEiJ_G0016381	Sbno2	99	84.548	ENSBTAG00000020780	SBNO2	100	82.789	Bos_taurus
MGP_SPRETEiJ_G0016381	Sbno2	97	84.084	ENSCAFG00000019543	SBNO2	100	82.156	Canis_familiaris
MGP_SPRETEiJ_G0016381	Sbno2	97	84.084	ENSCAFG00020017115	SBNO2	99	83.813	Canis_lupus_dingo
MGP_SPRETEiJ_G0016381	Sbno2	99	84.311	ENSCHIG00000026127	SBNO2	100	82.524	Capra_hircus
MGP_SPRETEiJ_G0016381	Sbno2	95	84.635	ENSCAPG00000005731	SBNO2	99	84.468	Cavia_aperea
MGP_SPRETEiJ_G0016381	Sbno2	99	81.662	ENSCPOG00000007477	SBNO2	99	81.832	Cavia_porcellus
MGP_SPRETEiJ_G0016381	Sbno2	98	82.595	ENSCCAG00000037518	SBNO2	99	80.707	Cebus_capucinus
MGP_SPRETEiJ_G0016381	Sbno2	100	81.319	ENSCATG00000037046	SBNO2	99	82.362	Cercocebus_atys
MGP_SPRETEiJ_G0016381	Sbno2	97	85.073	ENSCLAG00000010178	SBNO2	98	88.566	Chinchilla_lanigera
MGP_SPRETEiJ_G0016381	Sbno2	100	82.125	ENSCSAG00000012317	SBNO2	99	81.685	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0016381	Sbno2	94	72.222	ENSCPBG00000008920	SBNO2	82	86.161	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0016381	Sbno2	93	82.968	ENSCANG00000036745	SBNO2	98	84.117	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0016381	Sbno2	100	93.180	ENSCGRG00001023960	Sbno2	100	93.180	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0016381	Sbno2	100	95.033	ENSCGRG00000011984	Sbno2	100	95.033	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0016381	Sbno2	90	66.232	ENSCSEG00000006856	si:ch73-63e15.2	90	68.720	Cynoglossus_semilaevis
MGP_SPRETEiJ_G0016381	Sbno2	94	66.667	ENSCVAG00000005663	si:ch73-63e15.2	76	68.312	Cyprinodon_variegatus
MGP_SPRETEiJ_G0016381	Sbno2	95	63.778	ENSDARG00000098801	sbno2a	94	60.460	Danio_rerio
MGP_SPRETEiJ_G0016381	Sbno2	90	67.888	ENSDARG00000016188	SBNO2	81	67.134	Danio_rerio
MGP_SPRETEiJ_G0016381	Sbno2	100	85.988	ENSDORG00000002916	Sbno2	100	85.988	Dipodomys_ordii
MGP_SPRETEiJ_G0016381	Sbno2	98	83.454	ENSEASG00005021621	SBNO2	98	84.409	Equus_asinus_asinus
MGP_SPRETEiJ_G0016381	Sbno2	98	83.454	ENSECAG00000011827	SBNO2	98	84.173	Equus_caballus
MGP_SPRETEiJ_G0016381	Sbno2	94	66.998	ENSELUG00000020457	si:ch73-63e15.2	80	66.307	Esox_lucius
MGP_SPRETEiJ_G0016381	Sbno2	99	72.287	ENSFALG00000013988	SBNO2	95	71.057	Ficedula_albicollis
MGP_SPRETEiJ_G0016381	Sbno2	98	82.658	ENSFDAG00000015186	SBNO2	100	79.704	Fukomys_damarensis
MGP_SPRETEiJ_G0016381	Sbno2	90	68.614	ENSFHEG00000022262	si:ch73-63e15.2	75	68.028	Fundulus_heteroclitus
MGP_SPRETEiJ_G0016381	Sbno2	92	67.600	ENSGMOG00000007542	si:ch73-63e15.2	97	67.969	Gadus_morhua
MGP_SPRETEiJ_G0016381	Sbno2	97	72.231	ENSGALG00000037522	SBNO2	97	68.236	Gallus_gallus
MGP_SPRETEiJ_G0016381	Sbno2	94	66.333	ENSGAFG00000004860	si:ch73-63e15.2	90	67.591	Gambusia_affinis
MGP_SPRETEiJ_G0016381	Sbno2	91	68.421	ENSGACG00000013190	si:ch73-63e15.2	95	68.680	Gasterosteus_aculeatus
MGP_SPRETEiJ_G0016381	Sbno2	97	72.200	ENSGAGG00000008348	SBNO2	99	68.178	Gopherus_agassizii
MGP_SPRETEiJ_G0016381	Sbno2	95	66.334	ENSHBUG00000010742	si:ch73-63e15.2	76	68.685	Haplochromis_burtoni
MGP_SPRETEiJ_G0016381	Sbno2	100	84.757	ENSHGLG00000008739	SBNO2	100	84.989	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0016381	Sbno2	97	86.628	ENSHGLG00100005269	SBNO2	98	89.094	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0016381	Sbno2	90	68.186	ENSHCOG00000000884	si:ch73-63e15.2	84	68.651	Hippocampus_comes
MGP_SPRETEiJ_G0016381	Sbno2	90	67.301	ENSIPUG00000019672	sbno2	93	70.478	Ictalurus_punctatus
MGP_SPRETEiJ_G0016381	Sbno2	95	66.776	ENSIPUG00000000537	si:ch73-63e15.2	84	68.394	Ictalurus_punctatus
MGP_SPRETEiJ_G0016381	Sbno2	99	86.486	ENSSTOG00000025832	SBNO2	100	85.956	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0016381	Sbno2	99	85.931	ENSJJAG00000017397	Sbno2	99	84.428	Jaculus_jaculus
MGP_SPRETEiJ_G0016381	Sbno2	91	68.658	ENSKMAG00000005541	si:ch73-63e15.2	76	68.718	Kryptolebias_marmoratus
MGP_SPRETEiJ_G0016381	Sbno2	90	68.122	ENSLBEG00000025016	si:ch73-63e15.2	96	69.381	Labrus_bergylta
MGP_SPRETEiJ_G0016381	Sbno2	51	63.485	ENSLBEG00000005937	-	99	64.545	Labrus_bergylta
MGP_SPRETEiJ_G0016381	Sbno2	53	68.886	ENSLACG00000012598	SBNO2	99	73.599	Latimeria_chalumnae
MGP_SPRETEiJ_G0016381	Sbno2	97	65.871	ENSLOCG00000004643	si:ch73-63e15.2	84	68.951	Lepisosteus_oculatus
MGP_SPRETEiJ_G0016381	Sbno2	97	77.840	ENSLAFG00000008824	SBNO2	100	79.130	Loxodonta_africana
MGP_SPRETEiJ_G0016381	Sbno2	100	79.602	ENSMFAG00000040030	SBNO2	99	80.493	Macaca_fascicularis
MGP_SPRETEiJ_G0016381	Sbno2	100	81.319	ENSMMUG00000010886	SBNO2	99	81.612	Macaca_mulatta
MGP_SPRETEiJ_G0016381	Sbno2	99	82.803	ENSMNEG00000039927	SBNO2	99	82.272	Macaca_nemestrina
MGP_SPRETEiJ_G0016381	Sbno2	90	83.319	ENSMLEG00000038556	SBNO2	98	83.668	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0016381	Sbno2	90	69.010	ENSMAMG00000018758	si:ch73-63e15.2	74	68.783	Mastacembelus_armatus
MGP_SPRETEiJ_G0016381	Sbno2	95	66.417	ENSMZEG00005010682	si:ch73-63e15.2	75	66.612	Maylandia_zebra
MGP_SPRETEiJ_G0016381	Sbno2	91	75.493	ENSMGAG00000003801	SBNO2	98	71.173	Meleagris_gallopavo
MGP_SPRETEiJ_G0016381	Sbno2	100	93.991	ENSMAUG00000008034	Sbno2	100	93.991	Mesocricetus_auratus
MGP_SPRETEiJ_G0016381	Sbno2	99	84.757	ENSMICG00000013071	SBNO2	99	84.256	Microcebus_murinus
MGP_SPRETEiJ_G0016381	Sbno2	100	95.404	ENSMOCG00000010504	Sbno2	100	95.404	Microtus_ochrogaster
MGP_SPRETEiJ_G0016381	Sbno2	98	75.258	ENSMODG00000005382	SBNO2	100	70.289	Monodelphis_domestica
MGP_SPRETEiJ_G0016381	Sbno2	76	64.969	ENSMALG00000021831	si:ch73-63e15.2	97	63.996	Monopterus_albus
MGP_SPRETEiJ_G0016381	Sbno2	100	99.481	ENSMUSG00000035673	Sbno2	100	99.512	Mus_musculus
MGP_SPRETEiJ_G0016381	Sbno2	100	98.591	MGP_PahariEiJ_G0030976	Sbno2	100	98.591	Mus_pahari
MGP_SPRETEiJ_G0016381	Sbno2	85	84.381	ENSMPUG00000008747	SBNO2	100	84.011	Mustela_putorius_furo
MGP_SPRETEiJ_G0016381	Sbno2	99	89.904	ENSNGAG00000004308	Sbno2	100	87.769	Nannospalax_galili
MGP_SPRETEiJ_G0016381	Sbno2	87	66.936	ENSNBRG00000022968	si:ch73-63e15.2	93	72.653	Neolamprologus_brichardi
MGP_SPRETEiJ_G0016381	Sbno2	92	86.486	ENSNLEG00000001305	SBNO2	99	81.670	Nomascus_leucogenys
MGP_SPRETEiJ_G0016381	Sbno2	75	73.623	ENSMEUG00000013511	-	78	73.623	Notamacropus_eugenii
MGP_SPRETEiJ_G0016381	Sbno2	92	86.022	ENSOPRG00000017238	SBNO2	100	83.755	Ochotona_princeps
MGP_SPRETEiJ_G0016381	Sbno2	97	84.710	ENSODEG00000011822	SBNO2	99	84.036	Octodon_degus
MGP_SPRETEiJ_G0016381	Sbno2	95	66.557	ENSONIG00000002490	si:ch73-63e15.2	91	68.312	Oreochromis_niloticus
MGP_SPRETEiJ_G0016381	Sbno2	90	68.003	ENSORLG00000000913	si:ch73-63e15.2	77	67.185	Oryzias_latipes
MGP_SPRETEiJ_G0016381	Sbno2	90	67.910	ENSORLG00020010978	si:ch73-63e15.2	77	67.185	Oryzias_latipes_hni
MGP_SPRETEiJ_G0016381	Sbno2	90	68.035	ENSORLG00015000202	si:ch73-63e15.2	77	67.358	Oryzias_latipes_hsok
MGP_SPRETEiJ_G0016381	Sbno2	91	67.298	ENSOMEG00000000359	si:ch73-63e15.2	73	67.040	Oryzias_melastigma
MGP_SPRETEiJ_G0016381	Sbno2	99	80.934	ENSOARG00000011130	SBNO2	100	78.029	Ovis_aries
MGP_SPRETEiJ_G0016381	Sbno2	98	82.814	ENSPPAG00000032482	SBNO2	97	82.510	Pan_paniscus
MGP_SPRETEiJ_G0016381	Sbno2	95	84.795	ENSPTRG00000010185	SBNO2	99	83.078	Pan_troglodytes
MGP_SPRETEiJ_G0016381	Sbno2	100	78.079	ENSPANG00000009658	SBNO2	99	78.988	Papio_anubis
MGP_SPRETEiJ_G0016381	Sbno2	83	69.943	ENSPKIG00000009707	-	90	67.663	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0016381	Sbno2	96	64.720	ENSPKIG00000024201	si:ch73-63e15.2	82	67.688	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0016381	Sbno2	77	78.274	ENSPSIG00000002852	SBNO2	100	77.868	Pelodiscus_sinensis
MGP_SPRETEiJ_G0016381	Sbno2	90	67.252	ENSPMGG00000014375	si:ch73-63e15.2	87	67.252	Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0016381	Sbno2	100	90.815	ENSPEMG00000024122	Sbno2	100	91.111	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0016381	Sbno2	99	74.415	ENSPCIG00000011264	SBNO2	100	71.084	Phascolarctos_cinereus
MGP_SPRETEiJ_G0016381	Sbno2	94	66.309	ENSPFOG00000004096	si:ch73-63e15.2	99	67.386	Poecilia_formosa
MGP_SPRETEiJ_G0016381	Sbno2	90	68.398	ENSPLAG00000014653	si:ch73-63e15.2	76	67.764	Poecilia_latipinna
MGP_SPRETEiJ_G0016381	Sbno2	94	66.417	ENSPMEG00000002129	si:ch73-63e15.2	90	69.570	Poecilia_mexicana
MGP_SPRETEiJ_G0016381	Sbno2	94	66.529	ENSPREG00000006755	si:ch73-63e15.2	75	65.922	Poecilia_reticulata
MGP_SPRETEiJ_G0016381	Sbno2	98	76.155	ENSPCAG00000012256	SBNO2	99	75.615	Procavia_capensis
MGP_SPRETEiJ_G0016381	Sbno2	99	78.679	ENSPCOG00000015216	SBNO2	100	77.859	Propithecus_coquereli
MGP_SPRETEiJ_G0016381	Sbno2	95	66.417	ENSPNYG00000019926	si:ch73-63e15.2	76	68.685	Pundamilia_nyererei
MGP_SPRETEiJ_G0016381	Sbno2	97	66.047	ENSPNAG00000020260	si:ch73-63e15.2	83	68.362	Pygocentrus_nattereri
MGP_SPRETEiJ_G0016381	Sbno2	96	64.677	ENSPNAG00000026609	sbno2a	82	70.035	Pygocentrus_nattereri
MGP_SPRETEiJ_G0016381	Sbno2	100	97.113	ENSRNOG00000013987	Sbno2	100	97.113	Rattus_norvegicus
MGP_SPRETEiJ_G0016381	Sbno2	99	75.439	ENSRBIG00000009740	SBNO2	95	76.087	Rhinopithecus_bieti
MGP_SPRETEiJ_G0016381	Sbno2	90	84.053	ENSRROG00000044671	SBNO2	98	84.917	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0016381	Sbno2	100	79.897	ENSSBOG00000023562	SBNO2	99	80.876	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0016381	Sbno2	89	78.364	ENSSHAG00000010241	SBNO2	97	78.211	Sarcophilus_harrisii
MGP_SPRETEiJ_G0016381	Sbno2	90	66.637	ENSSFOG00015005861	si:ch73-63e15.2	92	66.464	Scleropages_formosus
MGP_SPRETEiJ_G0016381	Sbno2	94	66.364	ENSSMAG00000012489	si:ch73-63e15.2	73	68.522	Scophthalmus_maximus
MGP_SPRETEiJ_G0016381	Sbno2	94	66.530	ENSSDUG00000003527	si:ch73-63e15.2	73	69.191	Seriola_dumerili
MGP_SPRETEiJ_G0016381	Sbno2	94	66.612	ENSSLDG00000004623	si:ch73-63e15.2	73	69.278	Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0016381	Sbno2	90	69.679	ENSSPAG00000017717	si:ch73-63e15.2	74	69.565	Stegastes_partitus
MGP_SPRETEiJ_G0016381	Sbno2	98	85.362	ENSSSCG00000030042	SBNO2	97	85.147	Sus_scrofa
MGP_SPRETEiJ_G0016381	Sbno2	89	68.323	ENSTRUG00000018193	si:ch73-63e15.2	86	67.762	Takifugu_rubripes
MGP_SPRETEiJ_G0016381	Sbno2	89	84.965	ENSUAMG00000006568	SBNO2	91	92.671	Ursus_americanus
MGP_SPRETEiJ_G0016381	Sbno2	97	84.325	ENSVVUG00000022823	SBNO2	100	80.014	Vulpes_vulpes
MGP_SPRETEiJ_G0016381	Sbno2	81	78.854	ENSXETG00000021579	sbno2	91	78.063	Xenopus_tropicalis
MGP_SPRETEiJ_G0016381	Sbno2	75	70.242	ENSXCOG00000009209	si:ch73-63e15.2	91	69.108	Xiphophorus_couchianus
MGP_SPRETEiJ_G0016381	Sbno2	94	66.333	ENSXMAG00000012091	si:ch73-63e15.2	81	70.673	Xiphophorus_maculatus