EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0016400 (Gene tree)
Gene ID: -
Gene Symbol: Mex3d
Alias: Rkhd1
Full Name: mex3 RNA binding family member D
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Minus strand
Length: 7265 bases
Position: chr10:79246477-79253741
Accession: 2681847
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0025103	KH_1	PF00013.29	3.7e-25	1	2
MGP_SPRETEiJ_P0025103	KH_1	PF00013.29	3.7e-25	2	2
MGP_SPRETEiJ_P0025104	KH_1	PF00013.29	5.8e-25	1	2
MGP_SPRETEiJ_P0025104	KH_1	PF00013.29	5.8e-25	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0025105	-	1358	-	MGP_SPRETEiJ_P0025105	267 (aa)	-	-
MGP_SPRETEiJ_T0025104	-	3208	-	MGP_SPRETEiJ_P0025104	718 (aa)	-	-
MGP_SPRETEiJ_T0025103	-	3218	-	MGP_SPRETEiJ_P0025103	611 (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0016400's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0016400's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_SPRETEiJ_G0016400	Mex3d	80	51.829	MGP_SPRETEiJ_G0023303	Mex3c	68	51.485

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0016400	Mex3d	89	79.747	ENSG00000181588	MEX3D	97	81.224	Homo_sapiens
MGP_SPRETEiJ_G0016400	Mex3d	88	51.171	ENSAPOG00000000124	MEX3D	99	51.150	Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0016400	Mex3d	73	80.095	ENSACIG00000017738	-	78	67.857	Amphilophus_citrinellus
MGP_SPRETEiJ_G0016400	Mex3d	82	53.757	ENSAOCG00000015529	MEX3D	96	54.183	Amphiprion_ocellaris
MGP_SPRETEiJ_G0016400	Mex3d	82	53.757	ENSAPEG00000012520	MEX3D	96	54.183	Amphiprion_percula
MGP_SPRETEiJ_G0016400	Mex3d	85	49.912	ENSATEG00000015620	MEX3D	96	50.087	Anabas_testudineus
MGP_SPRETEiJ_G0016400	Mex3d	83	77.515	ENSANAG00000035413	-	86	77.515	Aotus_nancymaae
MGP_SPRETEiJ_G0016400	Mex3d	87	51.083	ENSACLG00000002826	MEX3D	93	51.259	Astatotilapia_calliptera
MGP_SPRETEiJ_G0016400	Mex3d	70	75.556	ENSAMXG00000042500	MEX3D	95	54.581	Astyanax_mexicanus
MGP_SPRETEiJ_G0016400	Mex3d	89	76.840	ENSBTAG00000040334	MEX3D	82	79.856	Bos_taurus
MGP_SPRETEiJ_G0016400	Mex3d	87	80.556	ENSCJAG00000045432	MEX3D	83	80.108	Callithrix_jacchus
MGP_SPRETEiJ_G0016400	Mex3d	77	78.755	ENSCAFG00000023712	MEX3D	100	78.970	Canis_familiaris
MGP_SPRETEiJ_G0016400	Mex3d	85	79.310	ENSCAFG00020017245	MEX3D	84	77.215	Canis_lupus_dingo
MGP_SPRETEiJ_G0016400	Mex3d	88	77.920	ENSCHIG00000012929	MEX3D	82	80.036	Capra_hircus
MGP_SPRETEiJ_G0016400	Mex3d	88	80.769	ENSCCAG00000028942	MEX3D	99	80.755	Cebus_capucinus
MGP_SPRETEiJ_G0016400	Mex3d	89	81.125	ENSCATG00000029350	MEX3D	87	80.944	Cercocebus_atys
MGP_SPRETEiJ_G0016400	Mex3d	89	81.307	ENSCSAG00000011984	MEX3D	89	81.125	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0016400	Mex3d	88	62.731	ENSCPBG00000018438	MEX3D	82	64.404	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0016400	Mex3d	100	95.018	ENSCGRG00001023775	Mex3d	100	94.843	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0016400	Mex3d	98	94.825	ENSCGRG00000018060	Mex3d	100	94.825	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0016400	Mex3d	82	48.555	ENSCSEG00000014157	MEX3D	95	52.115	Cynoglossus_semilaevis
MGP_SPRETEiJ_G0016400	Mex3d	72	67.925	ENSCVAG00000021251	MEX3D	89	48.950	Cyprinodon_variegatus
MGP_SPRETEiJ_G0016400	Mex3d	60	73.947	ENSDNOG00000041317	-	99	73.485	Dasypus_novemcinctus
MGP_SPRETEiJ_G0016400	Mex3d	88	80.762	ENSEASG00005021741	MEX3D	82	82.033	Equus_asinus_asinus
MGP_SPRETEiJ_G0016400	Mex3d	88	81.056	ENSECAG00000030546	MEX3D	59	82.332	Equus_caballus
MGP_SPRETEiJ_G0016400	Mex3d	85	49.156	ENSELUG00000008214	MEX3D	97	53.308	Esox_lucius
MGP_SPRETEiJ_G0016400	Mex3d	85	79.808	ENSFCAG00000043755	MEX3D	98	80.000	Felis_catus
MGP_SPRETEiJ_G0016400	Mex3d	56	95.000	ENSFDAG00000009670	-	100	84.158	Fukomys_damarensis
MGP_SPRETEiJ_G0016400	Mex3d	82	66.075	ENSGALG00000052296	MEX3D	90	64.554	Gallus_gallus
MGP_SPRETEiJ_G0016400	Mex3d	90	50.528	ENSGAFG00000008425	MEX3D	91	69.057	Gambusia_affinis
MGP_SPRETEiJ_G0016400	Mex3d	80	51.471	ENSGACG00000015299	MEX3D	94	52.622	Gasterosteus_aculeatus
MGP_SPRETEiJ_G0016400	Mex3d	88	62.915	ENSGAGG00000001233	MEX3D	80	63.670	Gopherus_agassizii
MGP_SPRETEiJ_G0016400	Mex3d	85	79.038	ENSGGOG00000001083	-	100	79.079	Gorilla_gorilla
MGP_SPRETEiJ_G0016400	Mex3d	87	51.625	ENSHBUG00000021600	MEX3D	93	51.986	Haplochromis_burtoni
MGP_SPRETEiJ_G0016400	Mex3d	87	79.742	ENSHGLG00000015152	MEX3D	92	79.228	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0016400	Mex3d	85	52.102	ENSHCOG00000001289	MEX3D	83	52.899	Hippocampus_comes
MGP_SPRETEiJ_G0016400	Mex3d	72	72.222	ENSIPUG00000019444	MEX3D	89	53.475	Ictalurus_punctatus
MGP_SPRETEiJ_G0016400	Mex3d	86	85.633	ENSSTOG00000025299	MEX3D	100	85.633	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0016400	Mex3d	92	84.806	ENSJJAG00000024350	Mex3d	97	84.806	Jaculus_jaculus
MGP_SPRETEiJ_G0016400	Mex3d	63	57.692	ENSKMAG00000006645	MEX3D	98	52.007	Kryptolebias_marmoratus
MGP_SPRETEiJ_G0016400	Mex3d	87	49.911	ENSLBEG00000000974	MEX3D	84	52.043	Labrus_bergylta
MGP_SPRETEiJ_G0016400	Mex3d	85	59.579	ENSLACG00000016407	MEX3D	81	58.716	Latimeria_chalumnae
MGP_SPRETEiJ_G0016400	Mex3d	87	79.182	ENSMFAG00000043798	MEX3D	100	78.996	Macaca_fascicularis
MGP_SPRETEiJ_G0016400	Mex3d	87	82.189	ENSMMUG00000043577	MEX3D	96	78.661	Macaca_mulatta
MGP_SPRETEiJ_G0016400	Mex3d	89	70.109	ENSMNEG00000043766	MEX3D	87	70.652	Macaca_nemestrina
MGP_SPRETEiJ_G0016400	Mex3d	90	48.662	ENSMAMG00000009575	MEX3D	88	49.435	Mastacembelus_armatus
MGP_SPRETEiJ_G0016400	Mex3d	87	49.404	ENSMZEG00005025626	MEX3D	86	50.943	Maylandia_zebra
MGP_SPRETEiJ_G0016400	Mex3d	77	64.681	ENSMGAG00000002325	MEX3D	100	63.907	Meleagris_gallopavo
MGP_SPRETEiJ_G0016400	Mex3d	100	91.360	ENSMAUG00000014977	Mex3d	100	90.760	Mesocricetus_auratus
MGP_SPRETEiJ_G0016400	Mex3d	85	83.430	ENSMICG00000036648	MEX3D	83	81.555	Microcebus_murinus
MGP_SPRETEiJ_G0016400	Mex3d	100	92.051	ENSMOCG00000010308	Mex3d	100	92.051	Microtus_ochrogaster
MGP_SPRETEiJ_G0016400	Mex3d	87	64.510	ENSMODG00000004116	MEX3D	97	66.606	Monodelphis_domestica
MGP_SPRETEiJ_G0016400	Mex3d	82	52.148	ENSMALG00000020525	MEX3D	95	53.089	Monopterus_albus
MGP_SPRETEiJ_G0016400	Mex3d	100	99.304	MGP_CAROLIEiJ_G0015582	Mex3d	100	99.304	Mus_caroli
MGP_SPRETEiJ_G0016400	Mex3d	100	99.673	ENSMUSG00000048696	Mex3d	100	99.582	Mus_musculus
MGP_SPRETEiJ_G0016400	Mex3d	76	75.375	ENSMLUG00000017018	MEX3D	96	75.161	Myotis_lucifugus
MGP_SPRETEiJ_G0016400	Mex3d	100	83.850	ENSNGAG00000021771	Mex3d	100	83.850	Nannospalax_galili
MGP_SPRETEiJ_G0016400	Mex3d	75	71.111	ENSNBRG00000020089	MEX3D	92	51.444	Neolamprologus_brichardi
MGP_SPRETEiJ_G0016400	Mex3d	64	84.000	ENSNLEG00000001719	-	99	83.243	Nomascus_leucogenys
MGP_SPRETEiJ_G0016400	Mex3d	78	65.839	ENSMEUG00000016404	-	100	66.119	Notamacropus_eugenii
MGP_SPRETEiJ_G0016400	Mex3d	67	79.208	ENSOPRG00000008708	-	94	80.977	Ochotona_princeps
MGP_SPRETEiJ_G0016400	Mex3d	85	79.886	ENSODEG00000012631	MEX3D	94	79.044	Octodon_degus
MGP_SPRETEiJ_G0016400	Mex3d	56	71.965	ENSOANG00000011764	-	95	70.219	Ornithorhynchus_anatinus
MGP_SPRETEiJ_G0016400	Mex3d	85	51.756	ENSORLG00000015223	MEX3D	85	52.473	Oryzias_latipes
MGP_SPRETEiJ_G0016400	Mex3d	85	52.336	ENSORLG00020017489	MEX3D	85	52.783	Oryzias_latipes_hni
MGP_SPRETEiJ_G0016400	Mex3d	88	51.737	ENSORLG00015017429	MEX3D	89	54.175	Oryzias_latipes_hsok
MGP_SPRETEiJ_G0016400	Mex3d	73	67.797	ENSOMEG00000020682	MEX3D	99	52.110	Oryzias_melastigma
MGP_SPRETEiJ_G0016400	Mex3d	84	82.592	ENSOGAG00000032843	MEX3D	100	81.868	Otolemur_garnettii
MGP_SPRETEiJ_G0016400	Mex3d	53	96.296	ENSPPRG00000024256	MEX3D	80	90.541	Panthera_pardus
MGP_SPRETEiJ_G0016400	Mex3d	90	80.645	ENSPTRG00000010208	MEX3D	92	80.645	Pan_troglodytes
MGP_SPRETEiJ_G0016400	Mex3d	88	77.407	ENSPANG00000025407	MEX3D	82	76.667	Papio_anubis
MGP_SPRETEiJ_G0016400	Mex3d	81	52.673	ENSPKIG00000011176	-	90	51.060	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0016400	Mex3d	82	51.068	ENSPKIG00000018608	MEX3D	91	53.728	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0016400	Mex3d	76	68.519	ENSPMGG00000017213	-	87	49.171	Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0016400	Mex3d	87	65.619	ENSPCIG00000000826	MEX3D	76	65.295	Phascolarctos_cinereus
MGP_SPRETEiJ_G0016400	Mex3d	85	52.000	ENSPFOG00000013402	MEX3D	97	52.415	Poecilia_formosa
MGP_SPRETEiJ_G0016400	Mex3d	85	50.669	ENSPLAG00000018945	MEX3D	93	67.925	Poecilia_latipinna
MGP_SPRETEiJ_G0016400	Mex3d	85	50.575	ENSPMEG00000009307	MEX3D	90	67.925	Poecilia_mexicana
MGP_SPRETEiJ_G0016400	Mex3d	74	67.925	ENSPREG00000017736	MEX3D	93	52.533	Poecilia_reticulata
MGP_SPRETEiJ_G0016400	Mex3d	81	81.489	ENSPPYG00000009324	-	97	81.526	Pongo_abelii
MGP_SPRETEiJ_G0016400	Mex3d	58	80.398	ENSPCAG00000010972	-	100	81.818	Procavia_capensis
MGP_SPRETEiJ_G0016400	Mex3d	91	81.607	ENSPCOG00000021111	MEX3D	93	81.607	Propithecus_coquereli
MGP_SPRETEiJ_G0016400	Mex3d	87	51.986	ENSPNYG00000006622	-	93	52.622	Pundamilia_nyererei
MGP_SPRETEiJ_G0016400	Mex3d	86	50.377	ENSPNAG00000027243	MEX3D	95	53.774	Pygocentrus_nattereri
MGP_SPRETEiJ_G0016400	Mex3d	99	97.049	ENSRNOG00000030830	Mex3d	98	96.904	Rattus_norvegicus
MGP_SPRETEiJ_G0016400	Mex3d	53	87.346	ENSRBIG00000035383	-	99	88.272	Rhinopithecus_bieti
MGP_SPRETEiJ_G0016400	Mex3d	82	53.620	ENSSFOG00015003876	mex3d	86	52.220	Scleropages_formosus
MGP_SPRETEiJ_G0016400	Mex3d	63	58.333	ENSSMAG00000003087	MEX3D	87	51.309	Scophthalmus_maximus
MGP_SPRETEiJ_G0016400	Mex3d	80	50.301	ENSSDUG00000015559	MEX3D	81	51.205	Seriola_dumerili
MGP_SPRETEiJ_G0016400	Mex3d	87	49.060	ENSSLDG00000010251	MEX3D	85	49.500	Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0016400	Mex3d	90	59.964	ENSSPUG00000015849	MEX3D	83	61.319	Sphenodon_punctatus
MGP_SPRETEiJ_G0016400	Mex3d	90	50.853	ENSSPAG00000005264	MEX3D	98	49.754	Stegastes_partitus
MGP_SPRETEiJ_G0016400	Mex3d	89	80.364	ENSSSCG00000021750	MEX3D	83	81.455	Sus_scrofa
MGP_SPRETEiJ_G0016400	Mex3d	80	63.599	ENSTGUG00000000201	MEX3D	99	63.747	Taeniopygia_guttata
MGP_SPRETEiJ_G0016400	Mex3d	85	49.808	ENSTRUG00000007986	MEX3D	95	51.654	Takifugu_rubripes
MGP_SPRETEiJ_G0016400	Mex3d	82	50.662	ENSTNIG00000015325	MEX3D	94	53.308	Tetraodon_nigroviridis
MGP_SPRETEiJ_G0016400	Mex3d	81	80.606	ENSTTRG00000008132	MEX3D	97	81.087	Tursiops_truncatus
MGP_SPRETEiJ_G0016400	Mex3d	62	71.111	ENSXCOG00000008198	MEX3D	90	71.111	Xiphophorus_couchianus
MGP_SPRETEiJ_G0016400	Mex3d	85	52.471	ENSXMAG00000025266	MEX3D	96	53.383	Xiphophorus_maculatus