EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0016447 (Gene tree)
Gene ID: -
Gene Symbol: Mrpl54
Alias: 0610008M19Rik|D10Sut1e
Full Name: mitochondrial ribosomal protein L54
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Minus strand
Length: 2244 bases
Position: chr10:80191985-80194228
Accession: 1913297
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0025273	Ribosomal_L37	PF08561.10	1.3e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0025274	-	531	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0025273	-	604	-	MGP_SPRETEiJ_P0025273	135 (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0016447's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0016447's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0016447	Mrpl54	100	68.116	ENSG00000183617	MRPL54	100	65.942	Homo_sapiens
MGP_SPRETEiJ_G0016447	Mrpl54	75	61.386	ENSAPOG00000022643	mrpl54	73	61.386	Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0016447	Mrpl54	100	69.565	ENSAMEG00000005908	MRPL54	100	68.116	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0016447	Mrpl54	65	65.909	ENSACIG00000006438	mrpl54	73	64.356	Amphilophus_citrinellus
MGP_SPRETEiJ_G0016447	Mrpl54	63	62.353	ENSAOCG00000006430	mrpl54	73	60.396	Amphiprion_ocellaris
MGP_SPRETEiJ_G0016447	Mrpl54	63	62.353	ENSAPEG00000023406	mrpl54	73	60.396	Amphiprion_percula
MGP_SPRETEiJ_G0016447	Mrpl54	63	58.824	ENSATEG00000004969	mrpl54	62	58.824	Anabas_testudineus
MGP_SPRETEiJ_G0016447	Mrpl54	78	60.952	ENSACAG00000017747	-	98	60.952	Anolis_carolinensis
MGP_SPRETEiJ_G0016447	Mrpl54	100	68.841	ENSANAG00000028692	MRPL54	100	68.116	Aotus_nancymaae
MGP_SPRETEiJ_G0016447	Mrpl54	65	64.773	ENSACLG00000001877	mrpl54	73	63.366	Astatotilapia_calliptera
MGP_SPRETEiJ_G0016447	Mrpl54	61	63.415	ENSAMXG00000018143	mrpl54	85	53.333	Astyanax_mexicanus
MGP_SPRETEiJ_G0016447	Mrpl54	100	68.841	ENSBTAG00000008396	MRPL54	100	69.565	Bos_taurus
MGP_SPRETEiJ_G0016447	Mrpl54	56	40.000	WBGene00009128	mrpl-54	59	40.000	Caenorhabditis_elegans
MGP_SPRETEiJ_G0016447	Mrpl54	100	69.565	ENSCJAG00000014998	MRPL54	100	68.841	Callithrix_jacchus
MGP_SPRETEiJ_G0016447	Mrpl54	100	68.841	ENSCAFG00000019192	MRPL54	100	67.391	Canis_familiaris
MGP_SPRETEiJ_G0016447	Mrpl54	100	68.841	ENSCAFG00020018333	MRPL54	100	67.391	Canis_lupus_dingo
MGP_SPRETEiJ_G0016447	Mrpl54	100	70.922	ENSCHIG00000026538	MRPL54	100	70.922	Capra_hircus
MGP_SPRETEiJ_G0016447	Mrpl54	70	78.947	ENSCAPG00000012166	MRPL54	93	79.545	Cavia_aperea
MGP_SPRETEiJ_G0016447	Mrpl54	100	65.942	ENSCPOG00000031082	MRPL54	100	64.493	Cavia_porcellus
MGP_SPRETEiJ_G0016447	Mrpl54	100	68.116	ENSCCAG00000000138	MRPL54	100	67.391	Cebus_capucinus
MGP_SPRETEiJ_G0016447	Mrpl54	100	68.841	ENSCATG00000014066	MRPL54	100	69.565	Cercocebus_atys
MGP_SPRETEiJ_G0016447	Mrpl54	100	68.889	ENSCLAG00000007908	MRPL54	100	68.889	Chinchilla_lanigera
MGP_SPRETEiJ_G0016447	Mrpl54	100	69.565	ENSCSAG00000010950	MRPL54	100	70.290	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0016447	Mrpl54	75	65.347	ENSCPBG00000017103	MRPL54	58	65.347	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0016447	Mrpl54	84	34.783	ENSCING00000019896	-	54	37.662	Ciona_intestinalis
MGP_SPRETEiJ_G0016447	Mrpl54	78	34.286	ENSCSAVG00000009604	-	58	36.905	Ciona_savignyi
MGP_SPRETEiJ_G0016447	Mrpl54	100	71.014	ENSCANG00000027841	MRPL54	100	69.565	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0016447	Mrpl54	100	78.261	ENSCGRG00001019482	Mrpl54	100	76.812	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0016447	Mrpl54	100	78.261	ENSCGRG00000010923	Mrpl54	100	76.812	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0016447	Mrpl54	79	61.321	ENSCSEG00000019883	mrpl54	71	61.321	Cynoglossus_semilaevis
MGP_SPRETEiJ_G0016447	Mrpl54	99	51.471	ENSCVAG00000002210	mrpl54	91	52.206	Cyprinodon_variegatus
MGP_SPRETEiJ_G0016447	Mrpl54	76	61.165	ENSDARG00000071468	mrpl54	76	61.165	Danio_rerio
MGP_SPRETEiJ_G0016447	Mrpl54	99	66.667	ENSDNOG00000007387	MRPL54	100	65.693	Dasypus_novemcinctus
MGP_SPRETEiJ_G0016447	Mrpl54	100	70.370	ENSDORG00000005326	Mrpl54	100	68.148	Dipodomys_ordii
MGP_SPRETEiJ_G0016447	Mrpl54	58	46.154	FBgn0034579	mRpL54	59	46.154	Drosophila_melanogaster
MGP_SPRETEiJ_G0016447	Mrpl54	96	69.173	ENSETEG00000017500	MRPL54	99	66.917	Echinops_telfairi
MGP_SPRETEiJ_G0016447	Mrpl54	64	54.023	ENSEBUG00000003179	mrpl54	75	54.023	Eptatretus_burgeri
MGP_SPRETEiJ_G0016447	Mrpl54	100	68.613	ENSEASG00005022283	MRPL54	100	68.613	Equus_asinus_asinus
MGP_SPRETEiJ_G0016447	Mrpl54	100	68.613	ENSECAG00000001515	MRPL54	100	68.613	Equus_caballus
MGP_SPRETEiJ_G0016447	Mrpl54	75	61.386	ENSELUG00000022358	mrpl54	73	61.386	Esox_lucius
MGP_SPRETEiJ_G0016447	Mrpl54	100	71.739	ENSFCAG00000007144	MRPL54	100	70.290	Felis_catus
MGP_SPRETEiJ_G0016447	Mrpl54	74	65.347	ENSFALG00000011660	MRPL54	79	71.765	Ficedula_albicollis
MGP_SPRETEiJ_G0016447	Mrpl54	100	65.217	ENSFDAG00000020803	MRPL54	100	63.768	Fukomys_damarensis
MGP_SPRETEiJ_G0016447	Mrpl54	81	58.182	ENSGALG00000027611	MRPL54	89	58.182	Gallus_gallus
MGP_SPRETEiJ_G0016447	Mrpl54	65	56.818	ENSGAFG00000016193	mrpl54	73	57.426	Gambusia_affinis
MGP_SPRETEiJ_G0016447	Mrpl54	66	67.416	ENSGAGG00000020238	MRPL54	69	67.045	Gopherus_agassizii
MGP_SPRETEiJ_G0016447	Mrpl54	100	68.841	ENSGGOG00000014722	MRPL54	100	66.667	Gorilla_gorilla
MGP_SPRETEiJ_G0016447	Mrpl54	65	64.773	ENSHBUG00000009028	mrpl54	60	63.366	Haplochromis_burtoni
MGP_SPRETEiJ_G0016447	Mrpl54	100	68.889	ENSHGLG00000006157	MRPL54	100	65.926	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0016447	Mrpl54	100	68.889	ENSHGLG00100000788	MRPL54	100	65.926	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0016447	Mrpl54	65	60.227	ENSHCOG00000000536	mrpl54	71	59.406	Hippocampus_comes
MGP_SPRETEiJ_G0016447	Mrpl54	65	61.364	ENSIPUG00000024854	mrpl54	75	60.577	Ictalurus_punctatus
MGP_SPRETEiJ_G0016447	Mrpl54	70	82.105	ENSSTOG00000022378	MRPL54	90	82.955	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0016447	Mrpl54	100	73.188	ENSJJAG00000020405	Mrpl54	100	71.739	Jaculus_jaculus
MGP_SPRETEiJ_G0016447	Mrpl54	100	48.921	ENSKMAG00000022310	mrpl54	63	61.364	Kryptolebias_marmoratus
MGP_SPRETEiJ_G0016447	Mrpl54	75	61.386	ENSLBEG00000005935	mrpl54	76	60.577	Labrus_bergylta
MGP_SPRETEiJ_G0016447	Mrpl54	81	60.000	ENSLACG00000013912	MRPL54	75	64.356	Latimeria_chalumnae
MGP_SPRETEiJ_G0016447	Mrpl54	65	67.045	ENSLOCG00000003860	mrpl54	73	66.337	Lepisosteus_oculatus
MGP_SPRETEiJ_G0016447	Mrpl54	100	69.065	ENSLAFG00000029657	MRPL54	100	67.626	Loxodonta_africana
MGP_SPRETEiJ_G0016447	Mrpl54	100	69.565	ENSMFAG00000003311	MRPL54	100	70.290	Macaca_fascicularis
MGP_SPRETEiJ_G0016447	Mrpl54	100	69.565	ENSMMUG00000044080	MRPL54	100	70.290	Macaca_mulatta
MGP_SPRETEiJ_G0016447	Mrpl54	100	69.565	ENSMNEG00000039499	MRPL54	100	70.290	Macaca_nemestrina
MGP_SPRETEiJ_G0016447	Mrpl54	75	59.406	ENSMAMG00000003291	mrpl54	77	59.406	Mastacembelus_armatus
MGP_SPRETEiJ_G0016447	Mrpl54	65	64.773	ENSMZEG00005009023	mrpl54	60	63.366	Maylandia_zebra
MGP_SPRETEiJ_G0016447	Mrpl54	63	63.529	ENSMGAG00000000951	MRPL54	88	63.529	Meleagris_gallopavo
MGP_SPRETEiJ_G0016447	Mrpl54	100	81.481	ENSMAUG00000009543	Mrpl54	100	81.481	Mesocricetus_auratus
MGP_SPRETEiJ_G0016447	Mrpl54	100	71.739	ENSMICG00000034581	MRPL54	87	71.014	Microcebus_murinus
MGP_SPRETEiJ_G0016447	Mrpl54	100	81.159	ENSMOCG00000017895	Mrpl54	100	79.710	Microtus_ochrogaster
MGP_SPRETEiJ_G0016447	Mrpl54	70	58.511	ENSMMOG00000020370	mrpl54	73	58.416	Mola_mola
MGP_SPRETEiJ_G0016447	Mrpl54	81	77.273	ENSMODG00000000602	MRPL54	81	71.818	Monodelphis_domestica
MGP_SPRETEiJ_G0016447	Mrpl54	65	62.500	ENSMALG00000020280	mrpl54	80	58.407	Monopterus_albus
MGP_SPRETEiJ_G0016447	Mrpl54	100	98.519	MGP_CAROLIEiJ_G0015629	Mrpl54	100	98.519	Mus_caroli
MGP_SPRETEiJ_G0016447	Mrpl54	100	98.519	ENSMUSG00000034932	Mrpl54	100	98.519	Mus_musculus
MGP_SPRETEiJ_G0016447	Mrpl54	99	94.030	MGP_PahariEiJ_G0031042	Mrpl54	99	94.030	Mus_pahari
MGP_SPRETEiJ_G0016447	Mrpl54	64	81.395	ENSMLUG00000010801	MRPL54	83	79.545	Myotis_lucifugus
MGP_SPRETEiJ_G0016447	Mrpl54	100	71.223	ENSNGAG00000021044	Mrpl54	100	69.784	Nannospalax_galili
MGP_SPRETEiJ_G0016447	Mrpl54	65	63.636	ENSNBRG00000000568	mrpl54	73	62.376	Neolamprologus_brichardi
MGP_SPRETEiJ_G0016447	Mrpl54	99	66.418	ENSMEUG00000013033	MRPL54	99	66.418	Notamacropus_eugenii
MGP_SPRETEiJ_G0016447	Mrpl54	100	69.630	ENSOPRG00000010035	-	100	68.889	Ochotona_princeps
MGP_SPRETEiJ_G0016447	Mrpl54	100	69.565	ENSODEG00000013969	MRPL54	100	68.116	Octodon_degus
MGP_SPRETEiJ_G0016447	Mrpl54	65	64.773	ENSONIG00000002312	mrpl54	65	63.366	Oreochromis_niloticus
MGP_SPRETEiJ_G0016447	Mrpl54	72	57.732	ENSORLG00000016960	mrpl54	71	59.091	Oryzias_latipes
MGP_SPRETEiJ_G0016447	Mrpl54	78	54.286	ENSORLG00020014934	mrpl54	85	59.091	Oryzias_latipes_hni
MGP_SPRETEiJ_G0016447	Mrpl54	72	56.701	ENSORLG00015010788	mrpl54	69	57.955	Oryzias_latipes_hsok
MGP_SPRETEiJ_G0016447	Mrpl54	65	59.091	ENSOMEG00000009005	mrpl54	73	59.406	Oryzias_melastigma
MGP_SPRETEiJ_G0016447	Mrpl54	99	72.263	ENSOGAG00000026254	-	100	70.803	Otolemur_garnettii
MGP_SPRETEiJ_G0016447	Mrpl54	100	71.739	ENSOGAG00000033519	-	100	70.290	Otolemur_garnettii
MGP_SPRETEiJ_G0016447	Mrpl54	100	68.116	ENSPPAG00000042418	MRPL54	100	65.942	Pan_paniscus
MGP_SPRETEiJ_G0016447	Mrpl54	100	68.889	ENSPPRG00000012325	MRPL54	100	66.667	Panthera_pardus
MGP_SPRETEiJ_G0016447	Mrpl54	100	70.922	ENSPTIG00000017727	MRPL54	100	69.504	Panthera_tigris_altaica
MGP_SPRETEiJ_G0016447	Mrpl54	100	68.116	ENSPTRG00000010276	MRPL54	100	65.942	Pan_troglodytes
MGP_SPRETEiJ_G0016447	Mrpl54	100	69.565	ENSPANG00000033944	MRPL54	100	70.290	Papio_anubis
MGP_SPRETEiJ_G0016447	Mrpl54	74	57.000	ENSPKIG00000009984	mrpl54	51	59.091	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0016447	Mrpl54	66	66.292	ENSPSIG00000013587	MRPL54	93	65.909	Pelodiscus_sinensis
MGP_SPRETEiJ_G0016447	Mrpl54	65	60.227	ENSPMGG00000015972	mrpl54	66	59.406	Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0016447	Mrpl54	100	78.986	ENSPEMG00000022929	Mrpl54	100	77.536	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0016447	Mrpl54	100	65.441	ENSPCIG00000025383	MRPL54	100	65.441	Phascolarctos_cinereus
MGP_SPRETEiJ_G0016447	Mrpl54	75	58.416	ENSPFOG00000007409	mrpl54	73	58.416	Poecilia_formosa
MGP_SPRETEiJ_G0016447	Mrpl54	75	58.416	ENSPLAG00000001640	mrpl54	73	58.416	Poecilia_latipinna
MGP_SPRETEiJ_G0016447	Mrpl54	75	58.416	ENSPLAG00000001633	mrpl54	73	58.416	Poecilia_latipinna
MGP_SPRETEiJ_G0016447	Mrpl54	75	58.416	ENSPMEG00000021078	mrpl54	73	58.416	Poecilia_mexicana
MGP_SPRETEiJ_G0016447	Mrpl54	75	58.416	ENSPMEG00000021068	mrpl54	73	58.416	Poecilia_mexicana
MGP_SPRETEiJ_G0016447	Mrpl54	75	57.426	ENSPREG00000012425	mrpl54	73	57.426	Poecilia_reticulata
MGP_SPRETEiJ_G0016447	Mrpl54	100	68.841	ENSPPYG00000009386	MRPL54	100	66.667	Pongo_abelii
MGP_SPRETEiJ_G0016447	Mrpl54	100	69.565	ENSPCAG00000000690	MRPL54	100	68.116	Procavia_capensis
MGP_SPRETEiJ_G0016447	Mrpl54	100	73.188	ENSPCOG00000027550	MRPL54	100	71.739	Propithecus_coquereli
MGP_SPRETEiJ_G0016447	Mrpl54	65	63.636	ENSPNYG00000022006	mrpl54	60	62.376	Pundamilia_nyererei
MGP_SPRETEiJ_G0016447	Mrpl54	86	56.034	ENSPNAG00000000077	mrpl54	82	56.034	Pygocentrus_nattereri
MGP_SPRETEiJ_G0016447	Mrpl54	100	88.889	ENSRNOG00000020464	Mrpl54	100	88.889	Rattus_norvegicus
MGP_SPRETEiJ_G0016447	Mrpl54	100	69.565	ENSRBIG00000027038	MRPL54	100	68.116	Rhinopithecus_bieti
MGP_SPRETEiJ_G0016447	Mrpl54	100	69.565	ENSRROG00000018776	MRPL54	100	68.116	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0016447	Mrpl54	100	68.116	ENSSBOG00000028081	MRPL54	100	67.391	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0016447	Mrpl54	83	75.221	ENSSHAG00000002557	MRPL54	83	72.566	Sarcophilus_harrisii
MGP_SPRETEiJ_G0016447	Mrpl54	66	58.427	ENSSFOG00015008073	mrpl54	63	57.955	Scleropages_formosus
MGP_SPRETEiJ_G0016447	Mrpl54	65	62.500	ENSSMAG00000009226	mrpl54	77	60.377	Scophthalmus_maximus
MGP_SPRETEiJ_G0016447	Mrpl54	75	63.366	ENSSDUG00000009545	mrpl54	64	63.636	Seriola_dumerili
MGP_SPRETEiJ_G0016447	Mrpl54	75	63.366	ENSSLDG00000001781	mrpl54	64	63.636	Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0016447	Mrpl54	65	65.909	ENSSPUG00000015361	MRPL54	67	65.909	Sphenodon_punctatus
MGP_SPRETEiJ_G0016447	Mrpl54	75	57.426	ENSSPAG00000015601	mrpl54	73	57.426	Stegastes_partitus
MGP_SPRETEiJ_G0016447	Mrpl54	75	57.426	ENSSPAG00000003775	-	73	57.426	Stegastes_partitus
MGP_SPRETEiJ_G0016447	Mrpl54	80	76.577	ENSSSCG00000024242	MRPL54	100	67.391	Sus_scrofa
MGP_SPRETEiJ_G0016447	Mrpl54	65	57.955	ENSTRUG00000004609	mrpl54	73	56.436	Takifugu_rubripes
MGP_SPRETEiJ_G0016447	Mrpl54	65	54.545	ENSTNIG00000015468	mrpl54	73	54.455	Tetraodon_nigroviridis
MGP_SPRETEiJ_G0016447	Mrpl54	100	69.630	ENSTTRG00000004410	MRPL54	100	69.630	Tursiops_truncatus
MGP_SPRETEiJ_G0016447	Mrpl54	100	69.565	ENSUAMG00000021572	MRPL54	100	68.116	Ursus_americanus
MGP_SPRETEiJ_G0016447	Mrpl54	100	70.290	ENSUMAG00000007416	MRPL54	100	69.565	Ursus_maritimus
MGP_SPRETEiJ_G0016447	Mrpl54	100	70.290	ENSVVUG00000004420	MRPL54	100	68.841	Vulpes_vulpes
MGP_SPRETEiJ_G0016447	Mrpl54	96	58.915	ENSXETG00000033250	MRPL54	95	58.915	Xenopus_tropicalis
MGP_SPRETEiJ_G0016447	Mrpl54	65	59.091	ENSXMAG00000003500	mrpl54	73	59.406	Xiphophorus_maculatus