EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0016531 (Gene tree)
Gene ID: -
Gene Symbol: Utp20
Alias: 3830408P06Rik|DRIM|mDRIM
Full Name: UTP20 small subunit processome component
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Minus strand
Length: 95530 bases
Position: chr10:87880287-87975816
Accession: 1917933
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0025628	DRIM	PF07539.12	3.3e-175	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0025628	-	8838	-	MGP_SPRETEiJ_P0025628	2790 (aa)	-	-
MGP_SPRETEiJ_T0025629	-	2694	-	MGP_SPRETEiJ_P0025629	850 (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0016531's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0016531's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0016531	Utp20	98	92.857	ENSG00000120800	UTP20	100	85.960	Homo_sapiens
MGP_SPRETEiJ_G0016531	Utp20	93	69.048	ENSAPOG00000002429	utp20	99	56.485	Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0016531	Utp20	98	97.619	ENSAMEG00000016416	UTP20	100	85.520	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0016531	Utp20	89	76.190	ENSACIG00000007987	utp20	99	56.024	Amphilophus_citrinellus
MGP_SPRETEiJ_G0016531	Utp20	52	69.048	ENSAOCG00000015055	utp20	96	56.999	Amphiprion_ocellaris
MGP_SPRETEiJ_G0016531	Utp20	94	69.048	ENSAPEG00000011605	utp20	99	56.650	Amphiprion_percula
MGP_SPRETEiJ_G0016531	Utp20	91	76.190	ENSATEG00000005601	utp20	99	55.359	Anabas_testudineus
MGP_SPRETEiJ_G0016531	Utp20	96	82.143	ENSAPLG00000015651	UTP20	100	67.441	Anas_platyrhynchos
MGP_SPRETEiJ_G0016531	Utp20	98	78.571	ENSACAG00000011671	UTP20	100	66.643	Anolis_carolinensis
MGP_SPRETEiJ_G0016531	Utp20	98	92.857	ENSANAG00000027152	UTP20	100	83.184	Aotus_nancymaae
MGP_SPRETEiJ_G0016531	Utp20	88	71.429	ENSACLG00000008064	utp20	99	59.307	Astatotilapia_calliptera
MGP_SPRETEiJ_G0016531	Utp20	90	73.810	ENSAMXG00000021039	utp20	99	55.962	Astyanax_mexicanus
MGP_SPRETEiJ_G0016531	Utp20	98	97.619	ENSBTAG00000003239	UTP20	100	85.064	Bos_taurus
MGP_SPRETEiJ_G0016531	Utp20	98	92.857	ENSCJAG00000001913	UTP20	100	84.871	Callithrix_jacchus
MGP_SPRETEiJ_G0016531	Utp20	98	90.476	ENSCAFG00000006964	UTP20	100	84.946	Canis_familiaris
MGP_SPRETEiJ_G0016531	Utp20	98	90.476	ENSCAFG00020024305	UTP20	100	84.946	Canis_lupus_dingo
MGP_SPRETEiJ_G0016531	Utp20	98	95.238	ENSCHIG00000009221	UTP20	100	84.354	Capra_hircus
MGP_SPRETEiJ_G0016531	Utp20	98	92.857	ENSTSYG00000003040	UTP20	100	83.691	Carlito_syrichta
MGP_SPRETEiJ_G0016531	Utp20	85	100.000	ENSCAPG00000014920	UTP20	100	74.344	Cavia_aperea
MGP_SPRETEiJ_G0016531	Utp20	98	95.238	ENSCPOG00000003129	UTP20	100	76.656	Cavia_porcellus
MGP_SPRETEiJ_G0016531	Utp20	98	90.476	ENSCCAG00000031422	UTP20	100	85.602	Cebus_capucinus
MGP_SPRETEiJ_G0016531	Utp20	94	92.857	ENSCATG00000035636	UTP20	100	82.666	Cercocebus_atys
MGP_SPRETEiJ_G0016531	Utp20	98	92.857	ENSCLAG00000011569	UTP20	100	79.685	Chinchilla_lanigera
MGP_SPRETEiJ_G0016531	Utp20	98	92.857	ENSCSAG00000003388	UTP20	100	85.673	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0016531	Utp20	92	90.909	ENSCHOG00000003532	UTP20	94	90.909	Choloepus_hoffmanni
MGP_SPRETEiJ_G0016531	Utp20	93	74.219	ENSCPBG00000004844	UTP20	99	69.604	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0016531	Utp20	93	30.303	ENSCSAVG00000008252	-	97	30.159	Ciona_savignyi
MGP_SPRETEiJ_G0016531	Utp20	98	92.857	ENSCANG00000034768	UTP20	100	82.660	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0016531	Utp20	98	100.000	ENSCGRG00001017151	Utp20	100	91.150	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0016531	Utp20	98	100.000	ENSCGRG00000008595	Utp20	100	90.723	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0016531	Utp20	90	71.429	ENSCSEG00000014760	utp20	99	53.584	Cynoglossus_semilaevis
MGP_SPRETEiJ_G0016531	Utp20	90	73.810	ENSCVAG00000001727	utp20	99	54.201	Cyprinodon_variegatus
MGP_SPRETEiJ_G0016531	Utp20	90	71.429	ENSDARG00000099280	utp20	99	56.625	Danio_rerio
MGP_SPRETEiJ_G0016531	Utp20	98	92.857	ENSDNOG00000016845	UTP20	100	83.048	Dasypus_novemcinctus
MGP_SPRETEiJ_G0016531	Utp20	96	100.000	ENSDORG00000014762	Utp20	99	87.013	Dipodomys_ordii
MGP_SPRETEiJ_G0016531	Utp20	94	86.784	ENSETEG00000019983	UTP20	94	88.326	Echinops_telfairi
MGP_SPRETEiJ_G0016531	Utp20	98	92.857	ENSEASG00005019981	UTP20	99	88.571	Equus_asinus_asinus
MGP_SPRETEiJ_G0016531	Utp20	98	92.857	ENSECAG00000006876	UTP20	99	88.571	Equus_caballus
MGP_SPRETEiJ_G0016531	Utp20	71	89.362	ENSEEUG00000003774	UTP20	75	82.947	Erinaceus_europaeus
MGP_SPRETEiJ_G0016531	Utp20	93	72.093	ENSELUG00000000798	utp20	99	56.147	Esox_lucius
MGP_SPRETEiJ_G0016531	Utp20	98	92.857	ENSFCAG00000006150	UTP20	100	85.167	Felis_catus
MGP_SPRETEiJ_G0016531	Utp20	93	68.750	ENSFALG00000011135	UTP20	100	65.974	Ficedula_albicollis
MGP_SPRETEiJ_G0016531	Utp20	97	95.238	ENSFDAG00000007567	UTP20	100	67.000	Fukomys_damarensis
MGP_SPRETEiJ_G0016531	Utp20	86	78.571	ENSFHEG00000004142	utp20	99	54.579	Fundulus_heteroclitus
MGP_SPRETEiJ_G0016531	Utp20	90	78.571	ENSGMOG00000006762	utp20	100	52.347	Gadus_morhua
MGP_SPRETEiJ_G0016531	Utp20	98	71.429	ENSGALG00000011643	UTP20	100	67.486	Gallus_gallus
MGP_SPRETEiJ_G0016531	Utp20	89	81.250	ENSGAFG00000006986	utp20	99	53.774	Gambusia_affinis
MGP_SPRETEiJ_G0016531	Utp20	91	71.429	ENSGACG00000019092	utp20	100	55.000	Gasterosteus_aculeatus
MGP_SPRETEiJ_G0016531	Utp20	73	67.969	ENSGAGG00000011169	UTP20	97	69.602	Gopherus_agassizii
MGP_SPRETEiJ_G0016531	Utp20	98	92.857	ENSGGOG00000004904	UTP20	100	84.860	Gorilla_gorilla
MGP_SPRETEiJ_G0016531	Utp20	90	71.429	ENSHBUG00000010613	utp20	99	55.673	Haplochromis_burtoni
MGP_SPRETEiJ_G0016531	Utp20	98	95.238	ENSHGLG00000006422	UTP20	100	79.198	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0016531	Utp20	98	95.238	ENSHGLG00100001086	UTP20	100	77.185	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0016531	Utp20	94	69.048	ENSHCOG00000005421	utp20	99	54.184	Hippocampus_comes
MGP_SPRETEiJ_G0016531	Utp20	91	80.952	ENSIPUG00000013717	utp20	99	56.241	Ictalurus_punctatus
MGP_SPRETEiJ_G0016531	Utp20	98	92.857	ENSSTOG00000015995	UTP20	100	86.072	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0016531	Utp20	98	95.238	ENSJJAG00000019321	Utp20	100	85.464	Jaculus_jaculus
MGP_SPRETEiJ_G0016531	Utp20	87	71.429	ENSKMAG00000005972	utp20	99	53.459	Kryptolebias_marmoratus
MGP_SPRETEiJ_G0016531	Utp20	91	73.810	ENSLBEG00000000781	utp20	99	54.237	Labrus_bergylta
MGP_SPRETEiJ_G0016531	Utp20	78	73.810	ENSLACG00000010098	UTP20	100	63.437	Latimeria_chalumnae
MGP_SPRETEiJ_G0016531	Utp20	84	73.810	ENSLOCG00000015197	utp20	99	59.019	Lepisosteus_oculatus
MGP_SPRETEiJ_G0016531	Utp20	98	92.857	ENSLAFG00000012983	UTP20	100	83.642	Loxodonta_africana
MGP_SPRETEiJ_G0016531	Utp20	98	92.857	ENSMFAG00000037766	UTP20	100	85.709	Macaca_fascicularis
MGP_SPRETEiJ_G0016531	Utp20	98	92.857	ENSMMUG00000012891	UTP20	100	85.852	Macaca_mulatta
MGP_SPRETEiJ_G0016531	Utp20	98	92.857	ENSMNEG00000037418	UTP20	100	83.632	Macaca_nemestrina
MGP_SPRETEiJ_G0016531	Utp20	98	92.857	ENSMLEG00000029148	UTP20	100	83.286	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0016531	Utp20	93	73.810	ENSMAMG00000002063	utp20	99	55.536	Mastacembelus_armatus
MGP_SPRETEiJ_G0016531	Utp20	90	71.429	ENSMZEG00005018123	utp20	99	56.148	Maylandia_zebra
MGP_SPRETEiJ_G0016531	Utp20	98	71.429	ENSMGAG00000011726	UTP20	100	67.248	Meleagris_gallopavo
MGP_SPRETEiJ_G0016531	Utp20	65	91.172	ENSMAUG00000011898	Utp20	100	90.894	Mesocricetus_auratus
MGP_SPRETEiJ_G0016531	Utp20	98	92.857	ENSMICG00000015736	UTP20	100	82.576	Microcebus_murinus
MGP_SPRETEiJ_G0016531	Utp20	98	97.619	ENSMOCG00000015242	Utp20	100	87.818	Microtus_ochrogaster
MGP_SPRETEiJ_G0016531	Utp20	93	76.190	ENSMMOG00000003360	utp20	100	52.648	Mola_mola
MGP_SPRETEiJ_G0016531	Utp20	98	92.857	ENSMODG00000003141	UTP20	100	72.472	Monodelphis_domestica
MGP_SPRETEiJ_G0016531	Utp20	91	73.810	ENSMALG00000002723	utp20	99	55.350	Monopterus_albus
MGP_SPRETEiJ_G0016531	Utp20	100	98.244	MGP_CAROLIEiJ_G0015713	Utp20	100	98.244	Mus_caroli
MGP_SPRETEiJ_G0016531	Utp20	100	99.606	ENSMUSG00000004356	Utp20	100	99.606	Mus_musculus
MGP_SPRETEiJ_G0016531	Utp20	98	100.000	MGP_PahariEiJ_G0031372	Utp20	100	97.204	Mus_pahari
MGP_SPRETEiJ_G0016531	Utp20	98	95.238	ENSMPUG00000011641	UTP20	100	85.172	Mustela_putorius_furo
MGP_SPRETEiJ_G0016531	Utp20	98	95.238	ENSMLUG00000002313	UTP20	100	85.112	Myotis_lucifugus
MGP_SPRETEiJ_G0016531	Utp20	98	97.619	ENSNGAG00000013738	Utp20	100	88.288	Nannospalax_galili
MGP_SPRETEiJ_G0016531	Utp20	86	71.429	ENSNBRG00000019464	utp20	99	72.308	Neolamprologus_brichardi
MGP_SPRETEiJ_G0016531	Utp20	98	90.551	ENSNLEG00000006166	UTP20	100	85.668	Nomascus_leucogenys
MGP_SPRETEiJ_G0016531	Utp20	89	100.000	ENSMEUG00000015457	UTP20	91	100.000	Notamacropus_eugenii
MGP_SPRETEiJ_G0016531	Utp20	86	93.631	ENSOPRG00000010546	UTP20	87	93.631	Ochotona_princeps
MGP_SPRETEiJ_G0016531	Utp20	98	95.238	ENSODEG00000013411	UTP20	100	80.007	Octodon_degus
MGP_SPRETEiJ_G0016531	Utp20	93	71.429	ENSONIG00000009910	utp20	100	55.807	Oreochromis_niloticus
MGP_SPRETEiJ_G0016531	Utp20	98	76.923	ENSOANG00000005578	UTP20	99	71.689	Ornithorhynchus_anatinus
MGP_SPRETEiJ_G0016531	Utp20	98	92.857	ENSOCUG00000010475	UTP20	100	85.770	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0016531	Utp20	89	71.429	ENSORLG00000008900	utp20	99	54.430	Oryzias_latipes
MGP_SPRETEiJ_G0016531	Utp20	89	69.048	ENSORLG00020005879	utp20	99	55.516	Oryzias_latipes_hni
MGP_SPRETEiJ_G0016531	Utp20	89	71.429	ENSORLG00015002843	utp20	99	51.595	Oryzias_latipes_hsok
MGP_SPRETEiJ_G0016531	Utp20	86	69.048	ENSOMEG00000023583	utp20	99	53.229	Oryzias_melastigma
MGP_SPRETEiJ_G0016531	Utp20	98	95.238	ENSOGAG00000015130	UTP20	100	84.090	Otolemur_garnettii
MGP_SPRETEiJ_G0016531	Utp20	98	97.619	ENSOARG00000014722	UTP20	100	84.712	Ovis_aries
MGP_SPRETEiJ_G0016531	Utp20	98	92.857	ENSPPAG00000001381	UTP20	100	85.837	Pan_paniscus
MGP_SPRETEiJ_G0016531	Utp20	98	92.857	ENSPPRG00000001026	UTP20	100	85.417	Panthera_pardus
MGP_SPRETEiJ_G0016531	Utp20	98	92.857	ENSPTIG00000020972	UTP20	100	85.274	Panthera_tigris_altaica
MGP_SPRETEiJ_G0016531	Utp20	98	92.857	ENSPTRG00000005349	UTP20	100	85.960	Pan_troglodytes
MGP_SPRETEiJ_G0016531	Utp20	98	92.857	ENSPANG00000020388	UTP20	100	85.745	Papio_anubis
MGP_SPRETEiJ_G0016531	Utp20	92	73.810	ENSPKIG00000007196	utp20	99	55.453	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0016531	Utp20	93	74.219	ENSPSIG00000016689	UTP20	100	68.951	Pelodiscus_sinensis
MGP_SPRETEiJ_G0016531	Utp20	93	71.429	ENSPMGG00000004066	utp20	99	54.565	Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0016531	Utp20	98	97.619	ENSPEMG00000024120	Utp20	100	90.645	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0016531	Utp20	61	49.324	ENSPMAG00000003948	-	100	50.423	Petromyzon_marinus
MGP_SPRETEiJ_G0016531	Utp20	98	92.857	ENSPCIG00000009298	UTP20	100	71.479	Phascolarctos_cinereus
MGP_SPRETEiJ_G0016531	Utp20	87	62.963	ENSPFOG00000003312	utp20	100	53.840	Poecilia_formosa
MGP_SPRETEiJ_G0016531	Utp20	89	73.810	ENSPLAG00000012874	utp20	99	55.388	Poecilia_latipinna
MGP_SPRETEiJ_G0016531	Utp20	89	73.810	ENSPMEG00000005915	utp20	99	54.631	Poecilia_mexicana
MGP_SPRETEiJ_G0016531	Utp20	90	73.810	ENSPREG00000013285	utp20	99	53.343	Poecilia_reticulata
MGP_SPRETEiJ_G0016531	Utp20	96	89.655	ENSPPYG00000004871	UTP20	100	85.708	Pongo_abelii
MGP_SPRETEiJ_G0016531	Utp20	83	91.919	ENSPCAG00000012791	UTP20	85	91.919	Procavia_capensis
MGP_SPRETEiJ_G0016531	Utp20	98	95.238	ENSPCOG00000024948	UTP20	100	85.340	Propithecus_coquereli
MGP_SPRETEiJ_G0016531	Utp20	98	95.238	ENSPVAG00000008113	UTP20	100	83.489	Pteropus_vampyrus
MGP_SPRETEiJ_G0016531	Utp20	90	71.429	ENSPNYG00000011561	utp20	99	55.520	Pundamilia_nyererei
MGP_SPRETEiJ_G0016531	Utp20	90	80.952	ENSPNAG00000006176	utp20	99	56.343	Pygocentrus_nattereri
MGP_SPRETEiJ_G0016531	Utp20	98	97.619	ENSRNOG00000005823	Utp20	100	94.265	Rattus_norvegicus
MGP_SPRETEiJ_G0016531	Utp20	98	92.857	ENSRBIG00000025384	UTP20	100	83.983	Rhinopithecus_bieti
MGP_SPRETEiJ_G0016531	Utp20	98	92.857	ENSRROG00000041254	UTP20	100	85.673	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0016531	Utp20	98	92.857	ENSSBOG00000035762	UTP20	100	85.336	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0016531	Utp20	98	69.275	ENSSHAG00000002298	UTP20	99	69.264	Sarcophilus_harrisii
MGP_SPRETEiJ_G0016531	Utp20	98	69.048	ENSSFOG00015001674	utp20	100	58.381	Scleropages_formosus
MGP_SPRETEiJ_G0016531	Utp20	86	74.419	ENSSMAG00000016460	utp20	99	52.740	Scophthalmus_maximus
MGP_SPRETEiJ_G0016531	Utp20	93	73.810	ENSSDUG00000013730	utp20	99	56.475	Seriola_dumerili
MGP_SPRETEiJ_G0016531	Utp20	93	73.810	ENSSLDG00000012844	utp20	99	56.371	Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0016531	Utp20	70	95.238	ENSSARG00000002796	-	60	96.296	Sorex_araneus
MGP_SPRETEiJ_G0016531	Utp20	97	75.000	ENSSPUG00000004513	UTP20	99	66.917	Sphenodon_punctatus
MGP_SPRETEiJ_G0016531	Utp20	92	69.048	ENSSPAG00000014674	utp20	99	56.199	Stegastes_partitus
MGP_SPRETEiJ_G0016531	Utp20	98	95.238	ENSSSCG00000000869	UTP20	100	85.458	Sus_scrofa
MGP_SPRETEiJ_G0016531	Utp20	70	73.810	ENSTGUG00000009053	-	100	67.739	Taeniopygia_guttata
MGP_SPRETEiJ_G0016531	Utp20	94	75.610	ENSTRUG00000005849	utp20	99	55.618	Takifugu_rubripes
MGP_SPRETEiJ_G0016531	Utp20	90	71.429	ENSTNIG00000006921	utp20	100	53.890	Tetraodon_nigroviridis
MGP_SPRETEiJ_G0016531	Utp20	72	100.000	ENSTBEG00000011917	UTP20	92	79.742	Tupaia_belangeri
MGP_SPRETEiJ_G0016531	Utp20	92	100.000	ENSTTRG00000017195	UTP20	98	85.167	Tursiops_truncatus
MGP_SPRETEiJ_G0016531	Utp20	98	95.238	ENSUAMG00000016363	UTP20	100	85.617	Ursus_americanus
MGP_SPRETEiJ_G0016531	Utp20	98	95.238	ENSUMAG00000000077	UTP20	100	84.902	Ursus_maritimus
MGP_SPRETEiJ_G0016531	Utp20	89	85.987	ENSVPAG00000011620	UTP20	92	85.223	Vicugna_pacos
MGP_SPRETEiJ_G0016531	Utp20	98	90.476	ENSVVUG00000018110	UTP20	100	84.659	Vulpes_vulpes
MGP_SPRETEiJ_G0016531	Utp20	97	72.441	ENSXETG00000032346	UTP20	100	62.237	Xenopus_tropicalis
MGP_SPRETEiJ_G0016531	Utp20	89	68.293	ENSXMAG00000006503	utp20	99	53.161	Xiphophorus_maculatus