EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0016590 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Minus strand
Length: 882 bases
Position: chr10:100117778-100118659
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0025868	RRM_1	PF00076.22	3.3e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0025868	-	882	-	MGP_SPRETEiJ_P0025868	226 (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0016590's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0016590's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_SPRETEiJ_G0016590	-	54	69.672	MGP_SPRETEiJ_G0015679	Alyref2	78	53.097
MGP_SPRETEiJ_G0016590	-	54	77.049	MGP_SPRETEiJ_G0018373	Alyref	69	58.850

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0016590	-	55	77.419	ENSG00000183684	ALYREF	67	57.269	Homo_sapiens
MGP_SPRETEiJ_G0016590	-	50	71.545	ENSAPOG00000018455	ALYREF	71	51.899	Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0016590	-	54	76.230	ENSAMEG00000017463	ALYREF	72	57.080	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0016590	-	54	75.410	ENSACAG00000010526	ALYREF	69	54.425	Anolis_carolinensis
MGP_SPRETEiJ_G0016590	-	55	78.226	ENSANAG00000022638	-	72	57.727	Aotus_nancymaae
MGP_SPRETEiJ_G0016590	-	54	68.033	ENSANAG00000028229	-	51	60.390	Aotus_nancymaae
MGP_SPRETEiJ_G0016590	-	55	77.419	ENSBTAG00000008498	ALYREF	69	58.150	Bos_taurus
MGP_SPRETEiJ_G0016590	-	54	77.049	ENSCJAG00000039942	ALYREF	55	72.115	Callithrix_jacchus
MGP_SPRETEiJ_G0016590	-	55	77.419	ENSCAFG00000005877	ALYREF	69	58.150	Canis_familiaris
MGP_SPRETEiJ_G0016590	-	55	77.419	ENSCAFG00020009815	ALYREF	58	77.119	Canis_lupus_dingo
MGP_SPRETEiJ_G0016590	-	55	77.419	ENSCHIG00000017396	ALYREF	67	57.456	Capra_hircus
MGP_SPRETEiJ_G0016590	-	54	77.049	ENSTSYG00000002272	ALYREF	70	57.078	Carlito_syrichta
MGP_SPRETEiJ_G0016590	-	54	76.230	ENSCPOG00000013710	ALYREF	76	57.080	Cavia_porcellus
MGP_SPRETEiJ_G0016590	-	55	77.419	ENSCCAG00000020578	-	55	72.115	Cebus_capucinus
MGP_SPRETEiJ_G0016590	-	55	71.774	ENSCCAG00000030237	-	78	52.212	Cebus_capucinus
MGP_SPRETEiJ_G0016590	-	55	77.419	ENSCATG00000033169	ALYREF	55	72.115	Cercocebus_atys
MGP_SPRETEiJ_G0016590	-	54	76.230	ENSCLAG00000015026	ALYREF	78	56.195	Chinchilla_lanigera
MGP_SPRETEiJ_G0016590	-	55	77.419	ENSCSAG00000002216	ALYREF	67	57.269	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0016590	-	55	77.419	ENSCANG00000034056	ALYREF	86	55.251	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0016590	-	58	75.385	ENSCGRG00001018191	-	77	57.965	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0016590	-	55	77.419	ENSCGRG00000015871	-	90	56.410	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0016590	-	54	77.869	ENSDNOG00000002563	ALYREF	75	57.269	Dasypus_novemcinctus
MGP_SPRETEiJ_G0016590	-	54	77.236	ENSDORG00000025849	-	73	58.150	Dipodomys_ordii
MGP_SPRETEiJ_G0016590	-	58	75.385	ENSETEG00000016596	ALYREF	100	57.965	Echinops_telfairi
MGP_SPRETEiJ_G0016590	-	55	77.419	ENSEASG00005005824	ALYREF	54	77.119	Equus_asinus_asinus
MGP_SPRETEiJ_G0016590	-	55	77.419	ENSECAG00000018754	ALYREF	54	77.119	Equus_caballus
MGP_SPRETEiJ_G0016590	-	55	77.419	ENSFCAG00000022549	ALYREF	68	57.709	Felis_catus
MGP_SPRETEiJ_G0016590	-	54	76.230	ENSFDAG00000001213	ALYREF	79	57.727	Fukomys_damarensis
MGP_SPRETEiJ_G0016590	-	55	75.806	ENSGALG00000007237	ALYREF	70	56.388	Gallus_gallus
MGP_SPRETEiJ_G0016590	-	54	75.410	ENSGAGG00000008536	ALYREF	69	54.825	Gopherus_agassizii
MGP_SPRETEiJ_G0016590	-	55	77.419	ENSGGOG00000013935	ALYREF	55	72.115	Gorilla_gorilla
MGP_SPRETEiJ_G0016590	-	55	75.806	ENSHGLG00000008293	ALYREF	77	56.195	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0016590	-	55	75.806	ENSHGLG00100006949	ALYREF	76	56.828	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0016590	-	100	49.138	ENSHCOG00000015046	ALYREF	70	51.489	Hippocampus_comes
MGP_SPRETEiJ_G0016590	-	56	77.165	ENSJJAG00000004134	-	69	58.850	Jaculus_jaculus
MGP_SPRETEiJ_G0016590	-	51	74.790	ENSLACG00000005694	ALYREF	71	53.448	Latimeria_chalumnae
MGP_SPRETEiJ_G0016590	-	55	78.226	ENSLAFG00000003083	ALYREF	95	58.407	Loxodonta_africana
MGP_SPRETEiJ_G0016590	-	55	77.419	ENSMFAG00000001394	ALYREF	69	57.269	Macaca_fascicularis
MGP_SPRETEiJ_G0016590	-	55	77.419	ENSMMUG00000012884	ALYREF	55	72.115	Macaca_mulatta
MGP_SPRETEiJ_G0016590	-	55	77.419	ENSMNEG00000043666	ALYREF	53	72.115	Macaca_nemestrina
MGP_SPRETEiJ_G0016590	-	55	77.419	ENSMLEG00000043353	ALYREF	82	54.425	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0016590	-	55	77.419	ENSMAUG00000020552	-	87	57.965	Mesocricetus_auratus
MGP_SPRETEiJ_G0016590	-	55	77.419	ENSMICG00000017403	ALYREF	55	72.115	Microcebus_murinus
MGP_SPRETEiJ_G0016590	-	55	77.419	ENSMOCG00000016792	-	79	57.965	Microtus_ochrogaster
MGP_SPRETEiJ_G0016590	-	54	77.049	ENSMODG00000003030	ALYREF	58	56.637	Monodelphis_domestica
MGP_SPRETEiJ_G0016590	-	100	49.367	ENSMALG00000019408	ALYREF	71	51.452	Monopterus_albus
MGP_SPRETEiJ_G0016590	-	54	68.852	MGP_CAROLIEiJ_G0014874	Alyref2	78	54.425	Mus_caroli
MGP_SPRETEiJ_G0016590	-	54	77.049	MGP_CAROLIEiJ_G0017529	Alyref	69	58.850	Mus_caroli
MGP_SPRETEiJ_G0016590	-	100	81.739	ENSMUSG00000094314	Gm4301	80	82.609	Mus_musculus
MGP_SPRETEiJ_G0016590	-	54	77.049	ENSMUSG00000025134	Alyref	69	58.850	Mus_musculus
MGP_SPRETEiJ_G0016590	-	100	79.646	ENSMUSG00000097878	Gm8764	78	78.319	Mus_musculus
MGP_SPRETEiJ_G0016590	-	100	81.304	ENSMUSG00000112856	Gm4305	80	82.174	Mus_musculus
MGP_SPRETEiJ_G0016590	-	100	80.973	ENSMUSG00000091779	Gm21293	79	79.204	Mus_musculus
MGP_SPRETEiJ_G0016590	-	100	80.531	ENSMUSG00000090854	Gm4340	79	80.088	Mus_musculus
MGP_SPRETEiJ_G0016590	-	100	79.646	ENSMUSG00000095022	Gm20765	79	78.319	Mus_musculus
MGP_SPRETEiJ_G0016590	-	100	81.739	ENSMUSG00000096640	Gm4312	80	82.609	Mus_musculus
MGP_SPRETEiJ_G0016590	-	100	81.304	ENSMUSG00000096744	Gm4307	80	82.174	Mus_musculus
MGP_SPRETEiJ_G0016590	-	100	79.646	ENSMUSG00000097427	Gm6763	78	78.319	Mus_musculus
MGP_SPRETEiJ_G0016590	-	100	79.646	ENSMUSG00000097550	Gm21304	79	78.319	Mus_musculus
MGP_SPRETEiJ_G0016590	-	100	63.717	ENSMUSG00000086727	4931428L18Rik	77	63.274	Mus_musculus
MGP_SPRETEiJ_G0016590	-	100	80.000	ENSMUSG00000091101	Gm4302	80	80.851	Mus_musculus
MGP_SPRETEiJ_G0016590	-	100	79.646	ENSMUSG00000094144	Gm21312	79	78.319	Mus_musculus
MGP_SPRETEiJ_G0016590	-	100	63.717	ENSMUSG00000117091	AC153137.1	77	61.947	Mus_musculus
MGP_SPRETEiJ_G0016590	-	100	81.304	ENSMUSG00000112931	Gm4303	80	82.174	Mus_musculus
MGP_SPRETEiJ_G0016590	-	54	71.311	ENSMUSG00000060244	Alyref2	78	53.982	Mus_musculus
MGP_SPRETEiJ_G0016590	-	50	78.947	MGP_PahariEiJ_G0018656	-	60	78.947	Mus_pahari
MGP_SPRETEiJ_G0016590	-	54	77.049	MGP_PahariEiJ_G0018655	-	69	58.850	Mus_pahari
MGP_SPRETEiJ_G0016590	-	57	82.171	MGP_PahariEiJ_G0027255	-	57	82.171	Mus_pahari
MGP_SPRETEiJ_G0016590	-	57	82.171	MGP_PahariEiJ_G0027254	-	59	82.171	Mus_pahari
MGP_SPRETEiJ_G0016590	-	99	42.276	ENSMLUG00000022869	-	50	56.552	Myotis_lucifugus
MGP_SPRETEiJ_G0016590	-	54	60.484	ENSMLUG00000028343	-	63	59.701	Myotis_lucifugus
MGP_SPRETEiJ_G0016590	-	98	40.724	ENSMLUG00000015043	-	56	57.143	Myotis_lucifugus
MGP_SPRETEiJ_G0016590	-	98	40.724	ENSMLUG00000024471	-	51	55.479	Myotis_lucifugus
MGP_SPRETEiJ_G0016590	-	100	48.945	ENSMLUG00000027516	-	59	48.444	Myotis_lucifugus
MGP_SPRETEiJ_G0016590	-	52	63.559	ENSMLUG00000002626	-	69	44.595	Myotis_lucifugus
MGP_SPRETEiJ_G0016590	-	100	47.234	ENSMLUG00000026271	-	60	46.396	Myotis_lucifugus
MGP_SPRETEiJ_G0016590	-	100	46.186	ENSMLUG00000024976	-	60	47.534	Myotis_lucifugus
MGP_SPRETEiJ_G0016590	-	54	77.049	ENSMLUG00000009555	-	66	57.080	Myotis_lucifugus
MGP_SPRETEiJ_G0016590	-	55	77.419	ENSNLEG00000010313	ALYREF	55	72.115	Nomascus_leucogenys
MGP_SPRETEiJ_G0016590	-	54	74.400	ENSODEG00000008359	ALYREF	70	57.391	Octodon_degus
MGP_SPRETEiJ_G0016590	-	56	68.613	ENSORLG00000012331	ALYREF	62	64.375	Oryzias_latipes
MGP_SPRETEiJ_G0016590	-	55	78.400	ENSOGAG00000012409	ALYREF	76	59.031	Otolemur_garnettii
MGP_SPRETEiJ_G0016590	-	55	77.419	ENSOARG00000017932	ALYREF	67	58.150	Ovis_aries
MGP_SPRETEiJ_G0016590	-	55	77.419	ENSPPRG00000010829	ALYREF	68	57.709	Panthera_pardus
MGP_SPRETEiJ_G0016590	-	55	77.419	ENSPTIG00000006399	ALYREF	81	72.414	Panthera_tigris_altaica
MGP_SPRETEiJ_G0016590	-	55	77.419	ENSPTRG00000009774	ALYREF	55	72.115	Pan_troglodytes
MGP_SPRETEiJ_G0016590	-	55	77.419	ENSPANG00000019265	ALYREF	55	72.115	Papio_anubis
MGP_SPRETEiJ_G0016590	-	55	77.419	ENSPPYG00000008749	ALYREF	67	57.269	Pongo_abelii
MGP_SPRETEiJ_G0016590	-	55	77.419	ENSPCOG00000020874	ALYREF	55	72.115	Propithecus_coquereli
MGP_SPRETEiJ_G0016590	-	55	77.419	ENSPVAG00000017866	ALYREF	69	57.965	Pteropus_vampyrus
MGP_SPRETEiJ_G0016590	-	55	77.419	ENSRBIG00000039651	ALYREF	70	57.273	Rhinopithecus_bieti
MGP_SPRETEiJ_G0016590	-	55	77.419	ENSRROG00000045364	ALYREF	74	56.140	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0016590	-	54	77.049	ENSSHAG00000010459	ALYREF	92	57.709	Sarcophilus_harrisii
MGP_SPRETEiJ_G0016590	-	55	57.576	ENSSLDG00000005386	-	50	57.576	Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0016590	-	54	76.230	ENSSPUG00000004600	ALYREF	69	55.947	Sphenodon_punctatus
MGP_SPRETEiJ_G0016590	-	50	70.732	ENSSPAG00000011178	ALYREF	57	62.195	Stegastes_partitus
MGP_SPRETEiJ_G0016590	-	55	77.419	ENSSSCG00000032655	ALYREF	70	58.150	Sus_scrofa
MGP_SPRETEiJ_G0016590	-	100	48.291	ENSTRUG00000008828	ALYREF	60	62.658	Takifugu_rubripes
MGP_SPRETEiJ_G0016590	-	54	77.049	ENSTBEG00000005834	ALYREF	100	57.269	Tupaia_belangeri
MGP_SPRETEiJ_G0016590	-	54	74.590	ENSTTRG00000012275	ALYREF	69	56.444	Tursiops_truncatus
MGP_SPRETEiJ_G0016590	-	57	73.077	ENSXETG00000005391	alyref	75	54.626	Xenopus_tropicalis