EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0016636 (Gene tree)
Gene ID: -
Gene Symbol: Zfc3h1
Alias: Ccdc131|Psrc2
Full Name: zinc finger%2C C3H1-type containing
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Plus strand
Length: 64672 bases
Position: chr10:115693146-115757817
Accession: 2446143
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0026007	zf-C3H1	PF10650.9	5.3e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0026007	-	6965	-	MGP_SPRETEiJ_P0026007	1994 (aa)	-	-
MGP_SPRETEiJ_T0026012	-	672	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0026013	-	420	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0026010	-	1991	-	MGP_SPRETEiJ_P0026010	599 (aa)	-	-
MGP_SPRETEiJ_T0026011	-	1548	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0026009	-	6104	-	MGP_SPRETEiJ_P0026009	1969 (aa)	-	-
MGP_SPRETEiJ_T0026008	-	6008	-	MGP_SPRETEiJ_P0026008	1937 (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0016636's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0016636's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0016636	Zfc3h1	99	91.324	ENSG00000133858	ZFC3H1	99	90.768	Homo_sapiens
MGP_SPRETEiJ_G0016636	Zfc3h1	99	91.182	ENSAMEG00000000498	ZFC3H1	99	90.777	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0016636	Zfc3h1	98	43.990	ENSACIG00000015672	ZFC3H1	95	45.239	Amphilophus_citrinellus
MGP_SPRETEiJ_G0016636	Zfc3h1	98	49.556	ENSAOCG00000022567	ZFC3H1	92	48.536	Amphiprion_ocellaris
MGP_SPRETEiJ_G0016636	Zfc3h1	94	50.248	ENSATEG00000015391	ZFC3H1	91	50.405	Anabas_testudineus
MGP_SPRETEiJ_G0016636	Zfc3h1	90	72.231	ENSAPLG00000016116	ZFC3H1	99	71.953	Anas_platyrhynchos
MGP_SPRETEiJ_G0016636	Zfc3h1	99	67.165	ENSACAG00000007327	ZFC3H1	96	68.130	Anolis_carolinensis
MGP_SPRETEiJ_G0016636	Zfc3h1	99	90.722	ENSANAG00000038329	ZFC3H1	99	90.115	Aotus_nancymaae
MGP_SPRETEiJ_G0016636	Zfc3h1	94	48.899	ENSACLG00000021274	ZFC3H1	94	49.245	Astatotilapia_calliptera
MGP_SPRETEiJ_G0016636	Zfc3h1	95	46.257	ENSAMXG00000042831	-	98	46.242	Astyanax_mexicanus
MGP_SPRETEiJ_G0016636	Zfc3h1	99	91.073	ENSBTAG00000012267	ZFC3H1	99	90.366	Bos_taurus
MGP_SPRETEiJ_G0016636	Zfc3h1	99	90.873	ENSCJAG00000001384	ZFC3H1	99	90.316	Callithrix_jacchus
MGP_SPRETEiJ_G0016636	Zfc3h1	99	89.789	ENSCAFG00000000453	ZFC3H1	96	91.332	Canis_familiaris
MGP_SPRETEiJ_G0016636	Zfc3h1	99	89.839	ENSCAFG00020016502	ZFC3H1	99	89.250	Canis_lupus_dingo
MGP_SPRETEiJ_G0016636	Zfc3h1	99	91.224	ENSCHIG00000020097	ZFC3H1	99	90.416	Capra_hircus
MGP_SPRETEiJ_G0016636	Zfc3h1	99	89.484	ENSTSYG00000005471	ZFC3H1	99	88.828	Carlito_syrichta
MGP_SPRETEiJ_G0016636	Zfc3h1	99	87.325	ENSCPOG00000009504	ZFC3H1	99	86.516	Cavia_porcellus
MGP_SPRETEiJ_G0016636	Zfc3h1	99	90.772	ENSCCAG00000035967	ZFC3H1	99	90.216	Cebus_capucinus
MGP_SPRETEiJ_G0016636	Zfc3h1	99	91.123	ENSCATG00000016321	ZFC3H1	99	90.567	Cercocebus_atys
MGP_SPRETEiJ_G0016636	Zfc3h1	99	91.333	ENSCLAG00000007646	ZFC3H1	99	90.376	Chinchilla_lanigera
MGP_SPRETEiJ_G0016636	Zfc3h1	99	90.973	ENSCSAG00000004100	ZFC3H1	99	90.416	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0016636	Zfc3h1	99	72.192	ENSCPBG00000013449	ZFC3H1	91	74.767	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0016636	Zfc3h1	99	91.123	ENSCANG00000030229	ZFC3H1	99	90.567	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0016636	Zfc3h1	99	89.685	ENSCGRG00001011660	Zfc3h1	99	89.935	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0016636	Zfc3h1	90	94.908	ENSCGRG00000006894	Zfc3h1	99	94.908	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0016636	Zfc3h1	93	39.672	ENSCSEG00000021462	ZFC3H1	95	40.975	Cynoglossus_semilaevis
MGP_SPRETEiJ_G0016636	Zfc3h1	93	48.199	ENSCVAG00000019629	-	94	48.758	Cyprinodon_variegatus
MGP_SPRETEiJ_G0016636	Zfc3h1	99	90.471	ENSDNOG00000010314	ZFC3H1	99	90.065	Dasypus_novemcinctus
MGP_SPRETEiJ_G0016636	Zfc3h1	83	39.665	ENSEBUG00000003491	-	61	40.281	Eptatretus_burgeri
MGP_SPRETEiJ_G0016636	Zfc3h1	99	90.171	ENSEASG00005008229	ZFC3H1	99	89.558	Equus_asinus_asinus
MGP_SPRETEiJ_G0016636	Zfc3h1	99	90.222	ENSECAG00000026833	ZFC3H1	99	89.608	Equus_caballus
MGP_SPRETEiJ_G0016636	Zfc3h1	99	46.715	ENSELUG00000013421	-	92	51.293	Esox_lucius
MGP_SPRETEiJ_G0016636	Zfc3h1	99	91.320	ENSFCAG00000024198	ZFC3H1	99	91.169	Felis_catus
MGP_SPRETEiJ_G0016636	Zfc3h1	99	69.795	ENSFALG00000010320	ZFC3H1	95	71.771	Ficedula_albicollis
MGP_SPRETEiJ_G0016636	Zfc3h1	99	90.672	ENSFDAG00000017503	ZFC3H1	99	90.271	Fukomys_damarensis
MGP_SPRETEiJ_G0016636	Zfc3h1	87	49.239	ENSGMOG00000004527	-	85	49.464	Gadus_morhua
MGP_SPRETEiJ_G0016636	Zfc3h1	99	71.128	ENSGALG00000010177	ZFC3H1	96	72.675	Gallus_gallus
MGP_SPRETEiJ_G0016636	Zfc3h1	68	47.742	ENSGAFG00000013283	-	96	48.404	Gambusia_affinis
MGP_SPRETEiJ_G0016636	Zfc3h1	99	46.943	ENSGACG00000007651	ZFC3H1	96	47.766	Gasterosteus_aculeatus
MGP_SPRETEiJ_G0016636	Zfc3h1	99	71.565	ENSGAGG00000013798	ZFC3H1	96	74.507	Gopherus_agassizii
MGP_SPRETEiJ_G0016636	Zfc3h1	99	90.973	ENSGGOG00000025994	ZFC3H1	99	90.517	Gorilla_gorilla
MGP_SPRETEiJ_G0016636	Zfc3h1	99	90.476	ENSHGLG00000014297	ZFC3H1	99	90.376	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0016636	Zfc3h1	99	90.326	ENSHGLG00100006263	ZFC3H1	99	90.226	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0016636	Zfc3h1	60	43.056	ENSHCOG00000009144	-	74	49.254	Hippocampus_comes
MGP_SPRETEiJ_G0016636	Zfc3h1	99	91.872	ENSSTOG00000002650	ZFC3H1	99	91.721	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0016636	Zfc3h1	97	47.843	ENSKMAG00000021476	-	91	48.100	Kryptolebias_marmoratus
MGP_SPRETEiJ_G0016636	Zfc3h1	79	48.387	ENSLBEG00000012352	-	81	54.274	Labrus_bergylta
MGP_SPRETEiJ_G0016636	Zfc3h1	95	61.671	ENSLACG00000002585	ZFC3H1	95	62.071	Latimeria_chalumnae
MGP_SPRETEiJ_G0016636	Zfc3h1	99	56.287	ENSLOCG00000016238	ZFC3H1	98	56.660	Lepisosteus_oculatus
MGP_SPRETEiJ_G0016636	Zfc3h1	99	89.619	ENSLAFG00000005820	ZFC3H1	100	90.010	Loxodonta_africana
MGP_SPRETEiJ_G0016636	Zfc3h1	99	91.224	ENSMFAG00000039403	ZFC3H1	99	90.667	Macaca_fascicularis
MGP_SPRETEiJ_G0016636	Zfc3h1	99	91.224	ENSMMUG00000020943	ZFC3H1	99	90.667	Macaca_mulatta
MGP_SPRETEiJ_G0016636	Zfc3h1	99	91.174	ENSMNEG00000008807	ZFC3H1	99	90.617	Macaca_nemestrina
MGP_SPRETEiJ_G0016636	Zfc3h1	99	91.123	ENSMLEG00000029967	ZFC3H1	99	90.567	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0016636	Zfc3h1	99	51.017	ENSMAMG00000021320	ZFC3H1	88	50.581	Mastacembelus_armatus
MGP_SPRETEiJ_G0016636	Zfc3h1	90	73.222	ENSMGAG00000010716	ZFC3H1	100	73.389	Meleagris_gallopavo
MGP_SPRETEiJ_G0016636	Zfc3h1	99	91.174	ENSMICG00000009137	ZFC3H1	99	90.617	Microcebus_murinus
MGP_SPRETEiJ_G0016636	Zfc3h1	99	79.023	ENSMODG00000020408	ZFC3H1	95	80.468	Monodelphis_domestica
MGP_SPRETEiJ_G0016636	Zfc3h1	100	98.000	MGP_CAROLIEiJ_G0015814	Zfc3h1	100	98.000	Mus_caroli
MGP_SPRETEiJ_G0016636	Zfc3h1	100	99.498	ENSMUSG00000034163	Zfc3h1	100	99.498	Mus_musculus
MGP_SPRETEiJ_G0016636	Zfc3h1	99	95.607	MGP_PahariEiJ_G0031273	Zfc3h1	99	95.607	Mus_pahari
MGP_SPRETEiJ_G0016636	Zfc3h1	99	91.119	ENSMPUG00000017488	ZFC3H1	99	90.918	Mustela_putorius_furo
MGP_SPRETEiJ_G0016636	Zfc3h1	99	87.982	ENSMLUG00000011723	ZFC3H1	99	87.860	Myotis_lucifugus
MGP_SPRETEiJ_G0016636	Zfc3h1	99	90.818	ENSNGAG00000017623	Zfc3h1	99	90.166	Nannospalax_galili
MGP_SPRETEiJ_G0016636	Zfc3h1	99	90.572	ENSNLEG00000004372	ZFC3H1	99	90.015	Nomascus_leucogenys
MGP_SPRETEiJ_G0016636	Zfc3h1	77	88.084	ENSOPRG00000008075	ZFC3H1	77	88.084	Ochotona_princeps
MGP_SPRETEiJ_G0016636	Zfc3h1	53	47.417	ENSONIG00000018271	ZFC3H1	99	48.045	Oreochromis_niloticus
MGP_SPRETEiJ_G0016636	Zfc3h1	99	90.667	ENSOCUG00000004591	ZFC3H1	99	90.467	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0016636	Zfc3h1	94	46.779	ENSORLG00000000155	-	86	47.248	Oryzias_latipes
MGP_SPRETEiJ_G0016636	Zfc3h1	94	46.779	ENSORLG00015020699	-	85	47.714	Oryzias_latipes_hsok
MGP_SPRETEiJ_G0016636	Zfc3h1	95	46.949	ENSOMEG00000015403	-	82	47.631	Oryzias_melastigma
MGP_SPRETEiJ_G0016636	Zfc3h1	99	90.030	ENSOGAG00000033606	ZFC3H1	99	89.474	Otolemur_garnettii
MGP_SPRETEiJ_G0016636	Zfc3h1	99	91.023	ENSOARG00000014589	ZFC3H1	99	90.361	Ovis_aries
MGP_SPRETEiJ_G0016636	Zfc3h1	99	91.123	ENSPPAG00000029409	ZFC3H1	99	90.567	Pan_paniscus
MGP_SPRETEiJ_G0016636	Zfc3h1	99	91.269	ENSPPRG00000010196	ZFC3H1	99	91.119	Panthera_pardus
MGP_SPRETEiJ_G0016636	Zfc3h1	99	91.269	ENSPTIG00000006898	ZFC3H1	99	91.119	Panthera_tigris_altaica
MGP_SPRETEiJ_G0016636	Zfc3h1	99	91.174	ENSPTRG00000005224	ZFC3H1	99	90.617	Pan_troglodytes
MGP_SPRETEiJ_G0016636	Zfc3h1	99	88.867	ENSPANG00000009558	ZFC3H1	99	88.309	Papio_anubis
MGP_SPRETEiJ_G0016636	Zfc3h1	99	51.399	ENSPKIG00000023219	ZFC3H1	96	51.510	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0016636	Zfc3h1	99	71.980	ENSPSIG00000012997	ZFC3H1	99	76.638	Pelodiscus_sinensis
MGP_SPRETEiJ_G0016636	Zfc3h1	93	45.680	ENSPMGG00000007504	ZFC3H1	94	48.194	Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0016636	Zfc3h1	99	79.081	ENSPCIG00000025066	ZFC3H1	96	80.935	Phascolarctos_cinereus
MGP_SPRETEiJ_G0016636	Zfc3h1	93	46.642	ENSPFOG00000001903	-	94	47.965	Poecilia_formosa
MGP_SPRETEiJ_G0016636	Zfc3h1	79	48.453	ENSPLAG00000015995	-	93	50.038	Poecilia_latipinna
MGP_SPRETEiJ_G0016636	Zfc3h1	89	46.431	ENSPMEG00000007517	-	95	43.996	Poecilia_mexicana
MGP_SPRETEiJ_G0016636	Zfc3h1	92	46.908	ENSPREG00000016974	ZFC3H1	94	48.274	Poecilia_reticulata
MGP_SPRETEiJ_G0016636	Zfc3h1	99	91.123	ENSPPYG00000004773	ZFC3H1	99	90.567	Pongo_abelii
MGP_SPRETEiJ_G0016636	Zfc3h1	90	83.803	ENSPCAG00000003723	ZFC3H1	90	84.370	Procavia_capensis
MGP_SPRETEiJ_G0016636	Zfc3h1	99	90.873	ENSPCOG00000019879	ZFC3H1	99	90.316	Propithecus_coquereli
MGP_SPRETEiJ_G0016636	Zfc3h1	94	89.650	ENSPVAG00000012354	ZFC3H1	94	89.650	Pteropus_vampyrus
MGP_SPRETEiJ_G0016636	Zfc3h1	93	48.771	ENSPNYG00000005977	ZFC3H1	85	49.272	Pundamilia_nyererei
MGP_SPRETEiJ_G0016636	Zfc3h1	91	48.984	ENSPNAG00000017704	-	97	46.113	Pygocentrus_nattereri
MGP_SPRETEiJ_G0016636	Zfc3h1	93	87.622	ENSRNOG00000053060	Zfc3h1	99	87.622	Rattus_norvegicus
MGP_SPRETEiJ_G0016636	Zfc3h1	99	88.465	ENSRBIG00000028462	ZFC3H1	99	87.908	Rhinopithecus_bieti
MGP_SPRETEiJ_G0016636	Zfc3h1	99	91.073	ENSRROG00000040039	ZFC3H1	99	90.517	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0016636	Zfc3h1	99	89.669	ENSSBOG00000032676	ZFC3H1	99	89.012	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0016636	Zfc3h1	99	77.928	ENSSHAG00000002431	ZFC3H1	98	80.902	Sarcophilus_harrisii
MGP_SPRETEiJ_G0016636	Zfc3h1	92	51.883	ENSSFOG00015018112	ZFC3H1	95	52.970	Scleropages_formosus
MGP_SPRETEiJ_G0016636	Zfc3h1	79	49.170	ENSSMAG00000019783	ZFC3H1	94	48.612	Scophthalmus_maximus
MGP_SPRETEiJ_G0016636	Zfc3h1	94	50.708	ENSSDUG00000000244	ZFC3H1	92	50.530	Seriola_dumerili
MGP_SPRETEiJ_G0016636	Zfc3h1	89	50.000	ENSSLDG00000018408	ZFC3H1	92	50.690	Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0016636	Zfc3h1	81	92.857	ENSSARG00000008639	ZFC3H1	82	92.857	Sorex_araneus
MGP_SPRETEiJ_G0016636	Zfc3h1	83	48.817	ENSSPAG00000001916	-	88	49.598	Stegastes_partitus
MGP_SPRETEiJ_G0016636	Zfc3h1	99	90.617	ENSSSCG00000000509	ZFC3H1	99	92.144	Sus_scrofa
MGP_SPRETEiJ_G0016636	Zfc3h1	100	69.527	ENSTGUG00000007206	ZFC3H1	100	70.609	Taeniopygia_guttata
MGP_SPRETEiJ_G0016636	Zfc3h1	60	48.384	ENSTRUG00000004528	-	89	48.865	Takifugu_rubripes
MGP_SPRETEiJ_G0016636	Zfc3h1	83	95.588	ENSTBEG00000016441	ZFC3H1	84	95.588	Tupaia_belangeri
MGP_SPRETEiJ_G0016636	Zfc3h1	99	88.961	ENSTTRG00000007328	ZFC3H1	99	88.761	Tursiops_truncatus
MGP_SPRETEiJ_G0016636	Zfc3h1	99	91.370	ENSUAMG00000001880	ZFC3H1	99	91.219	Ursus_americanus
MGP_SPRETEiJ_G0016636	Zfc3h1	99	90.713	ENSUMAG00000021131	ZFC3H1	99	90.612	Ursus_maritimus
MGP_SPRETEiJ_G0016636	Zfc3h1	90	92.402	ENSVVUG00000008655	ZFC3H1	99	92.402	Vulpes_vulpes
MGP_SPRETEiJ_G0016636	Zfc3h1	95	57.947	ENSXETG00000033302	ZFC3H1	99	57.009	Xenopus_tropicalis
MGP_SPRETEiJ_G0016636	Zfc3h1	93	48.093	ENSXMAG00000006933	-	94	47.821	Xiphophorus_maculatus