EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0016699 (Gene tree)
Gene ID: -
Gene Symbol: Tsfm
Alias: 2310050B20Rik|9430024O13Rik|EF-TS|EF-Tsmt
Full Name: Ts translation elongation factor%2C mitochondrial
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Minus strand
Length: 20539 bases
Position: chr10:128146222-128166760
Accession: 1913649
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0026221	EF_TS	PF00889.19	1.1e-26	1	1
MGP_SPRETEiJ_P0026225	EF_TS	PF00889.19	2.3e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0026221	-	1205	-	MGP_SPRETEiJ_P0026221	324 (aa)	-	-
MGP_SPRETEiJ_T0026220	-	655	-	MGP_SPRETEiJ_P0026220	206 (aa)	-	-
MGP_SPRETEiJ_T0026223	-	833	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0026222	-	641	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0026225	-	1271	-	MGP_SPRETEiJ_P0026225	193 (aa)	-	-
MGP_SPRETEiJ_T0026224	-	656	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0026226	-	675	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0016699's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0016699's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0016699	Tsfm	96	86.901	ENSG00000123297	TSFM	100	92.262	Homo_sapiens
MGP_SPRETEiJ_G0016699	Tsfm	96	54.301	ENSAPOG00000014844	tsfm	97	52.090	Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0016699	Tsfm	99	83.854	ENSAMEG00000005452	TSFM	100	84.308	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0016699	Tsfm	96	55.376	ENSACIG00000001066	tsfm	98	53.698	Amphilophus_citrinellus
MGP_SPRETEiJ_G0016699	Tsfm	96	52.432	ENSAOCG00000007132	tsfm	97	52.090	Amphiprion_ocellaris
MGP_SPRETEiJ_G0016699	Tsfm	96	53.055	ENSAPEG00000015755	tsfm	97	53.055	Amphiprion_percula
MGP_SPRETEiJ_G0016699	Tsfm	96	54.301	ENSATEG00000001497	tsfm	99	52.038	Anabas_testudineus
MGP_SPRETEiJ_G0016699	Tsfm	87	67.832	ENSACAG00000013044	TSFM	87	67.832	Anolis_carolinensis
MGP_SPRETEiJ_G0016699	Tsfm	96	87.540	ENSANAG00000038019	TSFM	100	86.769	Aotus_nancymaae
MGP_SPRETEiJ_G0016699	Tsfm	96	55.376	ENSACLG00000000139	tsfm	99	52.830	Astatotilapia_calliptera
MGP_SPRETEiJ_G0016699	Tsfm	88	51.916	ENSAMXG00000001713	tsfm	89	51.916	Astyanax_mexicanus
MGP_SPRETEiJ_G0016699	Tsfm	93	86.755	ENSBTAG00000016912	TSFM	88	81.416	Bos_taurus
MGP_SPRETEiJ_G0016699	Tsfm	84	34.000	WBGene00010094	tsfm-1	92	34.000	Caenorhabditis_elegans
MGP_SPRETEiJ_G0016699	Tsfm	96	86.624	ENSCJAG00000006600	TSFM	100	85.890	Callithrix_jacchus
MGP_SPRETEiJ_G0016699	Tsfm	86	85.357	ENSCAFG00000000293	-	91	84.589	Canis_familiaris
MGP_SPRETEiJ_G0016699	Tsfm	86	85.357	ENSCAFG00020022844	TSFM	79	78.528	Canis_lupus_dingo
MGP_SPRETEiJ_G0016699	Tsfm	96	83.871	ENSCHIG00000013850	TSFM	100	83.951	Capra_hircus
MGP_SPRETEiJ_G0016699	Tsfm	73	89.787	ENSTSYG00000028892	TSFM	94	88.980	Carlito_syrichta
MGP_SPRETEiJ_G0016699	Tsfm	60	72.539	ENSCAPG00000007733	-	100	72.195	Cavia_aperea
MGP_SPRETEiJ_G0016699	Tsfm	92	85.619	ENSCPOG00000037732	TSFM	100	84.404	Cavia_porcellus
MGP_SPRETEiJ_G0016699	Tsfm	98	84.817	ENSCCAG00000033254	TSFM	100	85.846	Cebus_capucinus
MGP_SPRETEiJ_G0016699	Tsfm	99	84.375	ENSCATG00000016867	TSFM	100	86.462	Cercocebus_atys
MGP_SPRETEiJ_G0016699	Tsfm	92	77.441	ENSCLAG00000009226	TSFM	100	76.615	Chinchilla_lanigera
MGP_SPRETEiJ_G0016699	Tsfm	99	84.375	ENSCSAG00000004601	TSFM	100	86.462	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0016699	Tsfm	74	86.620	ENSCHOG00000002360	TSFM	81	88.235	Choloepus_hoffmanni
MGP_SPRETEiJ_G0016699	Tsfm	90	71.717	ENSCPBG00000018147	TSFM	88	71.717	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0016699	Tsfm	86	33.442	ENSCING00000001275	-	91	33.442	Ciona_intestinalis
MGP_SPRETEiJ_G0016699	Tsfm	74	33.566	ENSCSAVG00000007722	-	99	31.944	Ciona_savignyi
MGP_SPRETEiJ_G0016699	Tsfm	80	86.047	ENSCANG00000030298	TSFM	92	90.323	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0016699	Tsfm	99	88.482	ENSCGRG00001023000	TSFM	100	87.423	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0016699	Tsfm	99	88.482	ENSCGRG00000006566	TSFM	100	87.423	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0016699	Tsfm	74	54.167	ENSCSEG00000003376	tsfm	82	54.167	Cynoglossus_semilaevis
MGP_SPRETEiJ_G0016699	Tsfm	89	54.167	ENSCVAG00000001340	tsfm	92	54.167	Cyprinodon_variegatus
MGP_SPRETEiJ_G0016699	Tsfm	98	55.026	ENSDARG00000060748	tsfm	98	50.949	Danio_rerio
MGP_SPRETEiJ_G0016699	Tsfm	99	79.688	ENSDNOG00000049415	TSFM	100	81.538	Dasypus_novemcinctus
MGP_SPRETEiJ_G0016699	Tsfm	77	87.500	ENSDORG00000007272	Tsfm	94	87.500	Dipodomys_ordii
MGP_SPRETEiJ_G0016699	Tsfm	79	46.405	FBgn0032646	mEFTs	87	39.860	Drosophila_melanogaster
MGP_SPRETEiJ_G0016699	Tsfm	97	80.317	ENSETEG00000002686	-	100	79.692	Echinops_telfairi
MGP_SPRETEiJ_G0016699	Tsfm	96	79.511	ENSEASG00005007292	TSFM	83	79.351	Equus_asinus_asinus
MGP_SPRETEiJ_G0016699	Tsfm	90	85.567	ENSECAG00000010520	TSFM	83	85.149	Equus_caballus
MGP_SPRETEiJ_G0016699	Tsfm	98	73.545	ENSEEUG00000004147	-	100	73.545	Erinaceus_europaeus
MGP_SPRETEiJ_G0016699	Tsfm	81	56.818	ENSELUG00000015481	tsfm	90	56.140	Esox_lucius
MGP_SPRETEiJ_G0016699	Tsfm	89	87.197	ENSFCAG00000023794	TSFM	100	83.692	Felis_catus
MGP_SPRETEiJ_G0016699	Tsfm	100	82.154	ENSFDAG00000016548	TSFM	100	82.154	Fukomys_damarensis
MGP_SPRETEiJ_G0016699	Tsfm	96	54.301	ENSFHEG00000013458	tsfm	98	53.205	Fundulus_heteroclitus
MGP_SPRETEiJ_G0016699	Tsfm	85	52.190	ENSGMOG00000000868	tsfm	93	52.190	Gadus_morhua
MGP_SPRETEiJ_G0016699	Tsfm	96	53.226	ENSGAFG00000021764	tsfm	98	52.244	Gambusia_affinis
MGP_SPRETEiJ_G0016699	Tsfm	89	51.034	ENSGACG00000000697	tsfm	92	51.971	Gasterosteus_aculeatus
MGP_SPRETEiJ_G0016699	Tsfm	92	71.192	ENSGAGG00000020897	TSFM	89	71.192	Gopherus_agassizii
MGP_SPRETEiJ_G0016699	Tsfm	96	87.540	ENSGGOG00000001415	TSFM	100	86.769	Gorilla_gorilla
MGP_SPRETEiJ_G0016699	Tsfm	96	54.839	ENSHBUG00000021738	tsfm	99	52.516	Haplochromis_burtoni
MGP_SPRETEiJ_G0016699	Tsfm	95	84.142	ENSHGLG00000008559	TSFM	100	83.077	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0016699	Tsfm	95	84.142	ENSHGLG00100005643	TSFM	100	83.077	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0016699	Tsfm	61	64.407	ENSHCOG00000019566	-	78	68.519	Hippocampus_comes
MGP_SPRETEiJ_G0016699	Tsfm	85	54.015	ENSHCOG00000021049	tsfm	88	54.015	Hippocampus_comes
MGP_SPRETEiJ_G0016699	Tsfm	92	42.000	ENSIPUG00000019836	tsfm	86	42.000	Ictalurus_punctatus
MGP_SPRETEiJ_G0016699	Tsfm	96	84.516	ENSSTOG00000001159	TSFM	100	84.000	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0016699	Tsfm	99	82.407	ENSJJAG00000012907	Tsfm	99	82.407	Jaculus_jaculus
MGP_SPRETEiJ_G0016699	Tsfm	88	54.895	ENSKMAG00000018906	tsfm	90	54.895	Kryptolebias_marmoratus
MGP_SPRETEiJ_G0016699	Tsfm	96	53.514	ENSLBEG00000019779	tsfm	97	51.768	Labrus_bergylta
MGP_SPRETEiJ_G0016699	Tsfm	88	67.586	ENSLACG00000018125	TSFM	89	67.586	Latimeria_chalumnae
MGP_SPRETEiJ_G0016699	Tsfm	90	43.960	ENSLOCG00000006608	tsfm	91	44.966	Lepisosteus_oculatus
MGP_SPRETEiJ_G0016699	Tsfm	94	85.621	ENSLAFG00000015177	TSFM	100	83.692	Loxodonta_africana
MGP_SPRETEiJ_G0016699	Tsfm	99	84.375	ENSMFAG00000036132	TSFM	100	86.462	Macaca_fascicularis
MGP_SPRETEiJ_G0016699	Tsfm	99	84.375	ENSMMUG00000005893	TSFM	100	86.462	Macaca_mulatta
MGP_SPRETEiJ_G0016699	Tsfm	99	84.375	ENSMNEG00000026351	TSFM	100	86.462	Macaca_nemestrina
MGP_SPRETEiJ_G0016699	Tsfm	96	86.901	ENSMLEG00000029811	TSFM	100	86.154	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0016699	Tsfm	95	57.297	ENSMAMG00000002230	tsfm	97	54.777	Mastacembelus_armatus
MGP_SPRETEiJ_G0016699	Tsfm	96	54.839	ENSMZEG00005008170	tsfm	99	52.516	Maylandia_zebra
MGP_SPRETEiJ_G0016699	Tsfm	100	87.692	ENSMAUG00000011705	Tsfm	100	87.692	Mesocricetus_auratus
MGP_SPRETEiJ_G0016699	Tsfm	99	82.292	ENSMICG00000003812	TSFM	100	83.692	Microcebus_murinus
MGP_SPRETEiJ_G0016699	Tsfm	99	89.005	ENSMOCG00000006104	Tsfm	100	89.506	Microtus_ochrogaster
MGP_SPRETEiJ_G0016699	Tsfm	89	53.633	ENSMMOG00000021854	tsfm	91	53.633	Mola_mola
MGP_SPRETEiJ_G0016699	Tsfm	100	73.538	ENSMODG00000021351	TSFM	95	73.538	Monodelphis_domestica
MGP_SPRETEiJ_G0016699	Tsfm	93	53.000	ENSMALG00000015046	tsfm	94	53.000	Monopterus_albus
MGP_SPRETEiJ_G0016699	Tsfm	100	98.148	MGP_CAROLIEiJ_G0015873	Tsfm	100	98.148	Mus_caroli
MGP_SPRETEiJ_G0016699	Tsfm	100	99.482	ENSMUSG00000040521	Tsfm	100	99.482	Mus_musculus
MGP_SPRETEiJ_G0016699	Tsfm	100	97.927	MGP_PahariEiJ_G0031212	Tsfm	100	97.927	Mus_pahari
MGP_SPRETEiJ_G0016699	Tsfm	98	85.263	ENSMPUG00000002051	TSFM	99	85.449	Mustela_putorius_furo
MGP_SPRETEiJ_G0016699	Tsfm	87	87.986	ENSMLUG00000005940	TSFM	100	84.259	Myotis_lucifugus
MGP_SPRETEiJ_G0016699	Tsfm	100	84.969	ENSNGAG00000014356	Tsfm	100	84.969	Nannospalax_galili
MGP_SPRETEiJ_G0016699	Tsfm	96	54.839	ENSNBRG00000016413	tsfm	99	52.201	Neolamprologus_brichardi
MGP_SPRETEiJ_G0016699	Tsfm	96	88.498	ENSNLEG00000017178	TSFM	100	87.692	Nomascus_leucogenys
MGP_SPRETEiJ_G0016699	Tsfm	75	78.740	ENSMEUG00000004047	TSFM	70	78.740	Notamacropus_eugenii
MGP_SPRETEiJ_G0016699	Tsfm	97	77.083	ENSOPRG00000006670	TSFM	100	77.168	Ochotona_princeps
MGP_SPRETEiJ_G0016699	Tsfm	97	82.278	ENSODEG00000001882	TSFM	100	81.538	Octodon_degus
MGP_SPRETEiJ_G0016699	Tsfm	97	47.003	ENSONIG00000019100	tsfm	98	47.003	Oreochromis_niloticus
MGP_SPRETEiJ_G0016699	Tsfm	91	73.604	ENSOCUG00000012512	TSFM	75	77.116	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0016699	Tsfm	96	51.125	ENSORLG00000030201	tsfm	98	51.125	Oryzias_latipes
MGP_SPRETEiJ_G0016699	Tsfm	88	53.846	ENSORLG00020004740	tsfm	98	50.804	Oryzias_latipes_hni
MGP_SPRETEiJ_G0016699	Tsfm	88	53.659	ENSORLG00015022703	tsfm	98	50.161	Oryzias_latipes_hsok
MGP_SPRETEiJ_G0016699	Tsfm	85	54.015	ENSOMEG00000008934	tsfm	86	54.015	Oryzias_melastigma
MGP_SPRETEiJ_G0016699	Tsfm	99	81.481	ENSOGAG00000012235	TSFM	99	81.481	Otolemur_garnettii
MGP_SPRETEiJ_G0016699	Tsfm	99	80.628	ENSOARG00000005095	TSFM	100	81.416	Ovis_aries
MGP_SPRETEiJ_G0016699	Tsfm	99	84.375	ENSPPAG00000043428	TSFM	100	86.462	Pan_paniscus
MGP_SPRETEiJ_G0016699	Tsfm	89	87.197	ENSPPRG00000009667	TSFM	100	83.692	Panthera_pardus
MGP_SPRETEiJ_G0016699	Tsfm	89	87.543	ENSPTIG00000015290	TSFM	100	84.000	Panthera_tigris_altaica
MGP_SPRETEiJ_G0016699	Tsfm	99	84.375	ENSPTRG00000005152	TSFM	100	86.462	Pan_troglodytes
MGP_SPRETEiJ_G0016699	Tsfm	98	84.817	ENSPANG00000007866	TSFM	97	85.127	Papio_anubis
MGP_SPRETEiJ_G0016699	Tsfm	84	53.285	ENSPKIG00000008495	tsfm	85	53.285	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0016699	Tsfm	64	69.953	ENSPSIG00000015776	TSFM	96	69.953	Pelodiscus_sinensis
MGP_SPRETEiJ_G0016699	Tsfm	89	50.685	ENSPMGG00000007022	tsfm	92	50.685	Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0016699	Tsfm	98	87.368	ENSPEMG00000000414	Tsfm	100	86.728	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0016699	Tsfm	90	78.498	ENSPCIG00000023619	TSFM	92	78.498	Phascolarctos_cinereus
MGP_SPRETEiJ_G0016699	Tsfm	96	52.941	ENSPFOG00000010782	tsfm	98	52.244	Poecilia_formosa
MGP_SPRETEiJ_G0016699	Tsfm	91	53.535	ENSPLAG00000008105	tsfm	94	53.872	Poecilia_latipinna
MGP_SPRETEiJ_G0016699	Tsfm	96	52.688	ENSPMEG00000002567	tsfm	98	52.885	Poecilia_mexicana
MGP_SPRETEiJ_G0016699	Tsfm	96	52.151	ENSPREG00000016696	tsfm	98	52.244	Poecilia_reticulata
MGP_SPRETEiJ_G0016699	Tsfm	99	84.896	ENSPPYG00000004708	TSFM	85	87.077	Pongo_abelii
MGP_SPRETEiJ_G0016699	Tsfm	93	83.280	ENSPCAG00000003789	TSFM	100	81.548	Procavia_capensis
MGP_SPRETEiJ_G0016699	Tsfm	91	86.054	ENSPCOG00000021606	TSFM	100	83.692	Propithecus_coquereli
MGP_SPRETEiJ_G0016699	Tsfm	91	87.755	ENSPVAG00000012141	TSFM	100	85.231	Pteropus_vampyrus
MGP_SPRETEiJ_G0016699	Tsfm	96	54.839	ENSPNYG00000001230	tsfm	99	52.516	Pundamilia_nyererei
MGP_SPRETEiJ_G0016699	Tsfm	93	54.645	ENSPNAG00000003241	tsfm	98	50.962	Pygocentrus_nattereri
MGP_SPRETEiJ_G0016699	Tsfm	98	94.737	ENSRNOG00000048843	Tsfm	100	87.037	Rattus_norvegicus
MGP_SPRETEiJ_G0016699	Tsfm	92	88.215	ENSRBIG00000037278	TSFM	100	86.462	Rhinopithecus_bieti
MGP_SPRETEiJ_G0016699	Tsfm	99	84.896	ENSRROG00000031769	TSFM	100	86.769	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0016699	Tsfm	96	74.441	ENSSBOG00000021465	TSFM	100	74.154	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0016699	Tsfm	100	72.807	ENSSHAG00000009664	TSFM	100	72.807	Sarcophilus_harrisii
MGP_SPRETEiJ_G0016699	Tsfm	85	55.109	ENSSFOG00015014457	tsfm	88	55.109	Scleropages_formosus
MGP_SPRETEiJ_G0016699	Tsfm	94	54.945	ENSSMAG00000002467	tsfm	96	53.465	Scophthalmus_maximus
MGP_SPRETEiJ_G0016699	Tsfm	96	54.595	ENSSDUG00000006833	tsfm	97	52.090	Seriola_dumerili
MGP_SPRETEiJ_G0016699	Tsfm	97	53.476	ENSSLDG00000000715	tsfm	98	51.757	Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0016699	Tsfm	61	36.667	ENSSLDG00000005996	-	73	36.667	Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0016699	Tsfm	78	69.036	ENSSARG00000000785	-	85	68.447	Sorex_araneus
MGP_SPRETEiJ_G0016699	Tsfm	85	69.286	ENSSPUG00000006435	TSFM	100	69.286	Sphenodon_punctatus
MGP_SPRETEiJ_G0016699	Tsfm	96	53.514	ENSSPAG00000002548	tsfm	97	52.412	Stegastes_partitus
MGP_SPRETEiJ_G0016699	Tsfm	96	86.174	ENSSSCG00000037767	TSFM	88	82.891	Sus_scrofa
MGP_SPRETEiJ_G0016699	Tsfm	88	55.439	ENSTRUG00000003081	tsfm	91	55.439	Takifugu_rubripes
MGP_SPRETEiJ_G0016699	Tsfm	92	54.667	ENSTNIG00000014578	tsfm	95	54.667	Tetraodon_nigroviridis
MGP_SPRETEiJ_G0016699	Tsfm	97	72.619	ENSTBEG00000011603	TSFM	100	72.832	Tupaia_belangeri
MGP_SPRETEiJ_G0016699	Tsfm	94	87.789	ENSTTRG00000008351	TSFM	100	83.841	Tursiops_truncatus
MGP_SPRETEiJ_G0016699	Tsfm	90	87.285	ENSUAMG00000013142	TSFM	100	84.000	Ursus_americanus
MGP_SPRETEiJ_G0016699	Tsfm	90	86.942	ENSUMAG00000020123	TSFM	100	83.692	Ursus_maritimus
MGP_SPRETEiJ_G0016699	Tsfm	73	90.099	ENSVPAG00000000209	TSFM	72	90.099	Vicugna_pacos
MGP_SPRETEiJ_G0016699	Tsfm	83	84.502	ENSVVUG00000016735	TSFM	91	83.746	Vulpes_vulpes
MGP_SPRETEiJ_G0016699	Tsfm	90	64.407	ENSXETG00000009653	tsfm	98	64.407	Xenopus_tropicalis
MGP_SPRETEiJ_G0016699	Tsfm	96	53.763	ENSXMAG00000018468	tsfm	98	52.885	Xiphophorus_maculatus