EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
MGP_SPRETEiJ_G0016722 (Gene tree)
Gene ID
-
Gene Symbol
R3hdm2
Alias
1300003K24Rik
Full Name
R3H domain containing 2
Gene Type
protein_coding
Species
Mus_spretus
Status
putative
Strand
Plus strand
Length
119055 bases
Position
chr10:128568076-128687130
Accession
1919000
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_SPRETEiJ_P0026304R3HPF01424.226.3e-1011
MGP_SPRETEiJ_P0026298R3HPF01424.226.5e-1011
MGP_SPRETEiJ_P0026299R3HPF01424.226.6e-1011
MGP_SPRETEiJ_P0026294R3HPF01424.226.7e-1011
MGP_SPRETEiJ_P0026295R3HPF01424.226.7e-1011
MGP_SPRETEiJ_P0026303R3HPF01424.226.7e-1011
MGP_SPRETEiJ_P0026296R3HPF01424.227e-1011
MGP_SPRETEiJ_P0026302R3HPF01424.227e-1011
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_SPRETEiJ_T0026311-462-MGP_SPRETEiJ_P0026311154 (aa)-UPI0001F79454
MGP_SPRETEiJ_T0026312-939-MGP_SPRETEiJ_P0026312263 (aa)--
MGP_SPRETEiJ_T0026310-542--- (aa)--
MGP_SPRETEiJ_T0026308-880--- (aa)--
MGP_SPRETEiJ_T0026309-763--- (aa)--
MGP_SPRETEiJ_T0026306-395--- (aa)--
MGP_SPRETEiJ_T0026307-2913-MGP_SPRETEiJ_P0026307745 (aa)--
MGP_SPRETEiJ_T0026304-2943-MGP_SPRETEiJ_P0026304980 (aa)--
MGP_SPRETEiJ_T0026305-273-MGP_SPRETEiJ_P002630591 (aa)-UPI0001F79452
MGP_SPRETEiJ_T0026302-3746-MGP_SPRETEiJ_P00263021028 (aa)--
MGP_SPRETEiJ_T0026303-3661-MGP_SPRETEiJ_P0026303994 (aa)--
MGP_SPRETEiJ_T0026300-447-MGP_SPRETEiJ_P002630098 (aa)-UPI0001F7944C
MGP_SPRETEiJ_T0026301-2912-MGP_SPRETEiJ_P0026301102 (aa)--
MGP_SPRETEiJ_T0026298-4183-MGP_SPRETEiJ_P00262981001 (aa)--
MGP_SPRETEiJ_T0026299-3645-MGP_SPRETEiJ_P00262991014 (aa)--
MGP_SPRETEiJ_T0026293-340-MGP_SPRETEiJ_P002629327 (aa)-UPI0001F79449
MGP_SPRETEiJ_T0026294-4080-MGP_SPRETEiJ_P00262941046 (aa)--
MGP_SPRETEiJ_T0026295-3968-MGP_SPRETEiJ_P00262951046 (aa)--
MGP_SPRETEiJ_T0026296-3914-MGP_SPRETEiJ_P00262961028 (aa)--
MGP_SPRETEiJ_T0026297-322-MGP_SPRETEiJ_P002629762 (aa)-UPI0001F7944B
Gene Model
Click here to download MGP_SPRETEiJ_G0016722's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0016722's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_SPRETEiJ_G0016722R3hdm29657.457MGP_SPRETEiJ_G0015350R3hdm19759.149
MGP_SPRETEiJ_G0016722R3hdm26156.936MGP_SPRETEiJ_G0033908Arpp218661.088
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
MGP_SPRETEiJ_G0016722R3hdm210095.266ENSG00000179912R3HDM2100100.000Homo_sapiens
MGP_SPRETEiJ_G0016722R3hdm25738.361ENSAPOG00000021873-8837.690Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0016722R3hdm29965.317ENSAPOG00000020341r3hdm29965.593Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0016722R3hdm210093.613ENSAMEG00000004812R3HDM210094.376Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0016722R3hdm29365.775ENSACIG00000016146r3hdm29866.417Amphilophus_citrinellus
MGP_SPRETEiJ_G0016722R3hdm29965.225ENSAOCG00000023694r3hdm29965.501Amphiprion_ocellaris
MGP_SPRETEiJ_G0016722R3hdm26736.450ENSAOCG00000003840-9337.725Amphiprion_ocellaris
MGP_SPRETEiJ_G0016722R3hdm26137.688ENSAPEG00000014325-8739.785Amphiprion_percula
MGP_SPRETEiJ_G0016722R3hdm29965.108ENSAPEG00000008851r3hdm210068.035Amphiprion_percula
MGP_SPRETEiJ_G0016722R3hdm29963.532ENSATEG00000025024r3hdm210068.096Anabas_testudineus
MGP_SPRETEiJ_G0016722R3hdm210080.724ENSACAG00000006388R3HDM210081.115Anolis_carolinensis
MGP_SPRETEiJ_G0016722R3hdm210095.069ENSANAG00000025397-10095.069Aotus_nancymaae
MGP_SPRETEiJ_G0016722R3hdm29890.452ENSANAG00000031310-10090.452Aotus_nancymaae
MGP_SPRETEiJ_G0016722R3hdm29964.044ENSACLG00000019106r3hdm29965.625Astatotilapia_calliptera
MGP_SPRETEiJ_G0016722R3hdm28870.822ENSAMXG00000017180r3hdm29961.875Astyanax_mexicanus
MGP_SPRETEiJ_G0016722R3hdm210094.769ENSBTAG00000018361R3HDM210094.769Bos_taurus
MGP_SPRETEiJ_G0016722R3hdm210094.773ENSCJAG00000007365R3HDM210094.773Callithrix_jacchus
MGP_SPRETEiJ_G0016722R3hdm210094.181ENSCAFG00000000215R3HDM210094.576Canis_familiaris
MGP_SPRETEiJ_G0016722R3hdm210093.763ENSCAFG00020023713R3HDM210094.165Canis_lupus_dingo
MGP_SPRETEiJ_G0016722R3hdm210094.266ENSCHIG00000014022R3HDM210094.266Capra_hircus
MGP_SPRETEiJ_G0016722R3hdm210092.998ENSTSYG00000001449R3HDM210093.491Carlito_syrichta
MGP_SPRETEiJ_G0016722R3hdm210092.412ENSCPOG00000009217R3HDM210092.412Cavia_porcellus
MGP_SPRETEiJ_G0016722R3hdm28994.673ENSCCAG00000026083R3HDM210094.438Cebus_capucinus
MGP_SPRETEiJ_G0016722R3hdm210095.069ENSCATG00000036929R3HDM210095.069Cercocebus_atys
MGP_SPRETEiJ_G0016722R3hdm210093.881ENSCLAG00000011997R3HDM210093.881Chinchilla_lanigera
MGP_SPRETEiJ_G0016722R3hdm210095.525ENSCSAG00000004911R3HDM210095.525Chlorocebus_sabaeus
MGP_SPRETEiJ_G0016722R3hdm27689.484ENSCHOG00000005636R3HDM29190.675Choloepus_hoffmanni
MGP_SPRETEiJ_G0016722R3hdm210080.037ENSCPBG00000013922R3HDM210080.966Chrysemys_picta_bellii
MGP_SPRETEiJ_G0016722R3hdm210094.668ENSCANG00000043807R3HDM210094.668Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0016722R3hdm210095.473ENSCGRG00001017324R3hdm210095.473Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0016722R3hdm210095.612ENSCGRG00000003862R3hdm210095.612Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0016722R3hdm29665.679ENSCSEG00000010925r3hdm210064.713Cynoglossus_semilaevis
MGP_SPRETEiJ_G0016722R3hdm29963.143ENSCVAG00000009058r3hdm29964.540Cyprinodon_variegatus
MGP_SPRETEiJ_G0016722R3hdm29363.559ENSDARG00000102610r3hdm29964.762Danio_rerio
MGP_SPRETEiJ_G0016722R3hdm210094.579ENSDNOG00000015033R3HDM210095.082Dasypus_novemcinctus
MGP_SPRETEiJ_G0016722R3hdm29494.805ENSDORG00000011462R3hdm29994.805Dipodomys_ordii
MGP_SPRETEiJ_G0016722R3hdm210094.742ENSEASG00005007091R3HDM210094.742Equus_asinus_asinus
MGP_SPRETEiJ_G0016722R3hdm210094.551ENSECAG00000003157R3HDM210094.551Equus_caballus
MGP_SPRETEiJ_G0016722R3hdm29863.000ENSELUG00000015969r3hdm29864.455Esox_lucius
MGP_SPRETEiJ_G0016722R3hdm210094.264ENSFCAG00000000192R3HDM29994.250Felis_catus
MGP_SPRETEiJ_G0016722R3hdm28977.419ENSFALG00000000255R3HDM210075.741Ficedula_albicollis
MGP_SPRETEiJ_G0016722R3hdm210093.314ENSFDAG00000019385R3HDM210094.269Fukomys_damarensis
MGP_SPRETEiJ_G0016722R3hdm29962.238ENSFHEG00000016484r3hdm29964.483Fundulus_heteroclitus
MGP_SPRETEiJ_G0016722R3hdm29564.833ENSGMOG00000007961r3hdm210064.637Gadus_morhua
MGP_SPRETEiJ_G0016722R3hdm210079.672ENSGALG00000043736R3HDM210079.301Gallus_gallus
MGP_SPRETEiJ_G0016722R3hdm26236.501ENSGAFG00000015558-8835.958Gambusia_affinis
MGP_SPRETEiJ_G0016722R3hdm29964.603ENSGAFG00000013887r3hdm210064.151Gambusia_affinis
MGP_SPRETEiJ_G0016722R3hdm29566.667ENSGACG00000006442r3hdm210068.039Gasterosteus_aculeatus
MGP_SPRETEiJ_G0016722R3hdm210080.316ENSGAGG00000017797R3HDM210080.976Gopherus_agassizii
MGP_SPRETEiJ_G0016722R3hdm210095.168ENSGGOG00000015007R3HDM210095.168Gorilla_gorilla
MGP_SPRETEiJ_G0016722R3hdm28886.462ENSHGLG00000010421-9786.462Heterocephalus_glaber_female
MGP_SPRETEiJ_G0016722R3hdm210093.786ENSHGLG00000010434-10093.786Heterocephalus_glaber_female
MGP_SPRETEiJ_G0016722R3hdm29682.445ENSHGLG00100018871-9983.088Heterocephalus_glaber_male
MGP_SPRETEiJ_G0016722R3hdm210093.690ENSHGLG00100004183-10093.690Heterocephalus_glaber_male
MGP_SPRETEiJ_G0016722R3hdm29962.749ENSHCOG00000001142r3hdm29664.080Hippocampus_comes
MGP_SPRETEiJ_G0016722R3hdm29962.231ENSIPUG00000023873r3hdm29963.977Ictalurus_punctatus
MGP_SPRETEiJ_G0016722R3hdm210092.551ENSSTOG00000013424R3HDM210093.469Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0016722R3hdm210094.264ENSJJAG00000010001R3hdm210094.646Jaculus_jaculus
MGP_SPRETEiJ_G0016722R3hdm29964.483ENSKMAG00000012695r3hdm29967.263Kryptolebias_marmoratus
MGP_SPRETEiJ_G0016722R3hdm29964.673ENSLBEG00000013115r3hdm29664.857Labrus_bergylta
MGP_SPRETEiJ_G0016722R3hdm29572.773ENSLACG00000019064r3hdm210072.510Latimeria_chalumnae
MGP_SPRETEiJ_G0016722R3hdm210070.432ENSLOCG00000005976r3hdm210071.611Lepisosteus_oculatus
MGP_SPRETEiJ_G0016722R3hdm210093.403ENSLAFG00000006510R3HDM210093.403Loxodonta_africana
MGP_SPRETEiJ_G0016722R3hdm210095.102ENSMFAG00000036385R3HDM210095.102Macaca_fascicularis
MGP_SPRETEiJ_G0016722R3hdm210095.315ENSMMUG00000021789R3HDM210095.315Macaca_mulatta
MGP_SPRETEiJ_G0016722R3hdm210095.365ENSMNEG00000025314R3HDM210095.365Macaca_nemestrina
MGP_SPRETEiJ_G0016722R3hdm210095.168ENSMLEG00000028915R3HDM210095.168Mandrillus_leucophaeus
MGP_SPRETEiJ_G0016722R3hdm25537.049ENSMAMG00000011755-8837.087Mastacembelus_armatus
MGP_SPRETEiJ_G0016722R3hdm29963.861ENSMAMG00000009793r3hdm29964.587Mastacembelus_armatus
MGP_SPRETEiJ_G0016722R3hdm29964.044ENSMZEG00005007319r3hdm29965.625Maylandia_zebra
MGP_SPRETEiJ_G0016722R3hdm210095.074ENSMICG00000012389R3HDM210095.074Microcebus_murinus
MGP_SPRETEiJ_G0016722R3hdm210095.331ENSMOCG00000014425R3hdm210095.331Microtus_ochrogaster
MGP_SPRETEiJ_G0016722R3hdm29467.055ENSMMOG00000007448r3hdm29967.055Mola_mola
MGP_SPRETEiJ_G0016722R3hdm28676.190ENSMALG00000010211r3hdm29768.300Monopterus_albus
MGP_SPRETEiJ_G0016722R3hdm210098.948MGP_CAROLIEiJ_G0015896R3hdm210098.948Mus_caroli
MGP_SPRETEiJ_G0016722R3hdm210099.618ENSMUSG00000025404R3hdm210099.618Mus_musculus
MGP_SPRETEiJ_G0016722R3hdm210097.992MGP_PahariEiJ_G0031189R3hdm210097.992Mus_pahari
MGP_SPRETEiJ_G0016722R3hdm29892.718ENSMPUG00000001818R3HDM29793.107Mustela_putorius_furo
MGP_SPRETEiJ_G0016722R3hdm210093.786ENSMLUG00000004980R3HDM210093.786Myotis_lucifugus
MGP_SPRETEiJ_G0016722R3hdm210095.411ENSNGAG00000018800R3hdm210095.411Nannospalax_galili
MGP_SPRETEiJ_G0016722R3hdm29464.346ENSNBRG00000004483r3hdm29966.490Neolamprologus_brichardi
MGP_SPRETEiJ_G0016722R3hdm210094.970ENSNLEG00000017351R3HDM210094.970Nomascus_leucogenys
MGP_SPRETEiJ_G0016722R3hdm29980.439ENSMEUG00000008588R3HDM210080.439Notamacropus_eugenii
MGP_SPRETEiJ_G0016722R3hdm210087.143ENSOPRG00000013670R3HDM210087.143Ochotona_princeps
MGP_SPRETEiJ_G0016722R3hdm29964.677ENSONIG00000005075r3hdm29966.372Oreochromis_niloticus
MGP_SPRETEiJ_G0016722R3hdm210094.179ENSOCUG00000013258R3HDM210094.179Oryctolagus_cuniculus
MGP_SPRETEiJ_G0016722R3hdm29964.411ENSORLG00000005502r3hdm29964.875Oryzias_latipes
MGP_SPRETEiJ_G0016722R3hdm29964.226ENSORLG00020017069r3hdm29964.690Oryzias_latipes_hni
MGP_SPRETEiJ_G0016722R3hdm29964.319ENSORLG00015012735r3hdm29964.782Oryzias_latipes_hsok
MGP_SPRETEiJ_G0016722R3hdm29960.917ENSOMEG00000018079r3hdm29962.000Oryzias_melastigma
MGP_SPRETEiJ_G0016722R3hdm29681.042ENSOGAG00000027966-9981.042Otolemur_garnettii
MGP_SPRETEiJ_G0016722R3hdm210094.675ENSOGAG00000012055R3HDM210094.675Otolemur_garnettii
MGP_SPRETEiJ_G0016722R3hdm210093.781ENSOARG00000006929R3HDM210093.781Ovis_aries
MGP_SPRETEiJ_G0016722R3hdm210095.266ENSPPAG00000034395R3HDM210095.266Pan_paniscus
MGP_SPRETEiJ_G0016722R3hdm210094.181ENSPPRG00000009240R3HDM210094.576Panthera_pardus
MGP_SPRETEiJ_G0016722R3hdm210094.181ENSPTIG00000008752R3HDM210094.576Panthera_tigris_altaica
MGP_SPRETEiJ_G0016722R3hdm210095.204ENSPTRG00000046457R3HDM210095.204Pan_troglodytes
MGP_SPRETEiJ_G0016722R3hdm29893.876ENSPANG00000024002R3HDM210093.876Papio_anubis
MGP_SPRETEiJ_G0016722R3hdm29966.826ENSPKIG00000003171r3hdm29967.337Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0016722R3hdm26372.500ENSPSIG00000006954R3HDM210073.594Pelodiscus_sinensis
MGP_SPRETEiJ_G0016722R3hdm29367.697ENSPMGG00000007061r3hdm29968.017Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0016722R3hdm210094.747ENSPEMG00000015964R3hdm210094.747Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0016722R3hdm210088.666ENSPCIG00000023841R3HDM210088.666Phascolarctos_cinereus
MGP_SPRETEiJ_G0016722R3hdm29575.263ENSPFOG00000006077r3hdm29576.369Poecilia_formosa
MGP_SPRETEiJ_G0016722R3hdm29963.756ENSPLAG00000002971r3hdm29964.480Poecilia_latipinna
MGP_SPRETEiJ_G0016722R3hdm25538.270ENSPMEG00000014457-8637.724Poecilia_mexicana
MGP_SPRETEiJ_G0016722R3hdm29963.756ENSPMEG00000005330r3hdm29964.480Poecilia_mexicana
MGP_SPRETEiJ_G0016722R3hdm29963.897ENSPREG00000008424r3hdm29964.608Poecilia_reticulata
MGP_SPRETEiJ_G0016722R3hdm29891.971ENSPPYG00000004685R3HDM28191.971Pongo_abelii
MGP_SPRETEiJ_G0016722R3hdm28893.015ENSPCAG00000014642R3HDM210085.772Procavia_capensis
MGP_SPRETEiJ_G0016722R3hdm210094.675ENSPCOG00000013201R3HDM210094.675Propithecus_coquereli
MGP_SPRETEiJ_G0016722R3hdm210094.168ENSPVAG00000003967R3HDM210094.168Pteropus_vampyrus
MGP_SPRETEiJ_G0016722R3hdm29464.004ENSPNYG00000013479r3hdm210066.006Pundamilia_nyererei
MGP_SPRETEiJ_G0016722R3hdm29963.771ENSPNAG00000017473r3hdm29965.374Pygocentrus_nattereri
MGP_SPRETEiJ_G0016722R3hdm210096.944ENSRNOG00000007801R3hdm210096.944Rattus_norvegicus
MGP_SPRETEiJ_G0016722R3hdm210092.604ENSRBIG00000037403R3HDM210092.308Rhinopithecus_bieti
MGP_SPRETEiJ_G0016722R3hdm210095.220ENSRROG00000022271R3HDM210095.168Rhinopithecus_roxellana
MGP_SPRETEiJ_G0016722R3hdm210095.069ENSSBOG00000023547R3HDM210095.069Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0016722R3hdm210085.945ENSSHAG00000003511R3HDM29989.367Sarcophilus_harrisii
MGP_SPRETEiJ_G0016722R3hdm29469.671ENSSFOG00015011219r3hdm29969.561Scleropages_formosus
MGP_SPRETEiJ_G0016722R3hdm29964.167ENSSMAG00000012073r3hdm210065.254Scophthalmus_maximus
MGP_SPRETEiJ_G0016722R3hdm29965.757ENSSDUG00000019269r3hdm210066.030Seriola_dumerili
MGP_SPRETEiJ_G0016722R3hdm25836.336ENSSDUG00000009188-9134.795Seriola_dumerili
MGP_SPRETEiJ_G0016722R3hdm29965.743ENSSLDG00000005252r3hdm210066.064Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0016722R3hdm29288.007ENSSARG00000003958R3HDM29488.007Sorex_araneus
MGP_SPRETEiJ_G0016722R3hdm210077.810ENSSPUG00000014132R3HDM210078.004Sphenodon_punctatus
MGP_SPRETEiJ_G0016722R3hdm29964.794ENSSPAG00000022594r3hdm210067.098Stegastes_partitus
MGP_SPRETEiJ_G0016722R3hdm210094.467ENSSSCG00000026498R3HDM210094.755Sus_scrofa
MGP_SPRETEiJ_G0016722R3hdm27380.104ENSTGUG00000015881R3HDM210080.104Taeniopygia_guttata
MGP_SPRETEiJ_G0016722R3hdm29562.256ENSTRUG00000015075r3hdm29964.651Takifugu_rubripes
MGP_SPRETEiJ_G0016722R3hdm28781.322ENSTNIG00000007057r3hdm28977.586Tetraodon_nigroviridis
MGP_SPRETEiJ_G0016722R3hdm28194.982ENSTBEG00000015967R3HDM28194.982Tupaia_belangeri
MGP_SPRETEiJ_G0016722R3hdm29687.872ENSTTRG00000013082R3HDM210080.880Tursiops_truncatus
MGP_SPRETEiJ_G0016722R3hdm210093.774ENSUAMG00000020913R3HDM210094.553Ursus_americanus
MGP_SPRETEiJ_G0016722R3hdm210088.855ENSUMAG00000019179R3HDM210089.759Ursus_maritimus
MGP_SPRETEiJ_G0016722R3hdm210088.337ENSVPAG00000008656R3HDM210088.337Vicugna_pacos
MGP_SPRETEiJ_G0016722R3hdm29893.866ENSVVUG00000018014R3HDM29794.255Vulpes_vulpes
MGP_SPRETEiJ_G0016722R3hdm210073.226ENSXETG00000017153r3hdm210073.700Xenopus_tropicalis
MGP_SPRETEiJ_G0016722R3hdm28662.955ENSXCOG00000013882r3hdm210063.605Xiphophorus_couchianus
MGP_SPRETEiJ_G0016722R3hdm26236.350ENSXMAG00000002994-8835.661Xiphophorus_maculatus
MGP_SPRETEiJ_G0016722R3hdm29964.081ENSXMAG00000017978r3hdm29964.977Xiphophorus_maculatus

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