EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0016767 (Gene tree)
Gene ID: -
Gene Symbol: Zc3h10
Alias: -
Full Name: zinc finger CCCH type containing 10
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Minus strand
Length: 5822 bases
Position: chr10:129914383-129920204
Accession: 2143670
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0026454	zf-CCCH	PF00642.24	2.7e-12	1	2
MGP_SPRETEiJ_P0026454	zf-CCCH	PF00642.24	2.7e-12	2	2
MGP_SPRETEiJ_P0026454	zf-CCCH_2	PF14608.6	5.3e-09	1	3
MGP_SPRETEiJ_P0026454	zf-CCCH_2	PF14608.6	5.3e-09	2	3
MGP_SPRETEiJ_P0026454	zf-CCCH_2	PF14608.6	5.3e-09	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0026456	-	992	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0026457	-	565	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0026454	-	3726	-	MGP_SPRETEiJ_P0026454	435 (aa)	-	-
MGP_SPRETEiJ_T0026455	-	757	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0016767's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0016767's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0016767	Zc3h10	100	96.552	ENSG00000135482	ZC3H10	100	96.552	Homo_sapiens
MGP_SPRETEiJ_G0016767	Zc3h10	86	73.913	ENSAPOG00000013862	zc3h10	75	75.463	Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0016767	Zc3h10	100	97.011	ENSAMEG00000019365	ZC3H10	100	97.011	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0016767	Zc3h10	81	76.389	ENSACIG00000022311	zc3h10	86	76.562	Amphilophus_citrinellus
MGP_SPRETEiJ_G0016767	Zc3h10	86	73.913	ENSAOCG00000021782	zc3h10	93	61.677	Amphiprion_ocellaris
MGP_SPRETEiJ_G0016767	Zc3h10	86	73.913	ENSAPEG00000010972	zc3h10	93	61.677	Amphiprion_percula
MGP_SPRETEiJ_G0016767	Zc3h10	89	73.478	ENSATEG00000024754	zc3h10	68	73.148	Anabas_testudineus
MGP_SPRETEiJ_G0016767	Zc3h10	100	73.165	ENSACAG00000005020	ZC3H10	94	79.040	Anolis_carolinensis
MGP_SPRETEiJ_G0016767	Zc3h10	100	96.322	ENSANAG00000004774	ZC3H10	100	96.322	Aotus_nancymaae
MGP_SPRETEiJ_G0016767	Zc3h10	82	76.562	ENSACLG00000001913	zc3h10	86	47.619	Astatotilapia_calliptera
MGP_SPRETEiJ_G0016767	Zc3h10	85	71.739	ENSAMXG00000000266	zc3h10	60	76.744	Astyanax_mexicanus
MGP_SPRETEiJ_G0016767	Zc3h10	100	96.092	ENSBTAG00000009542	ZC3H10	100	96.092	Bos_taurus
MGP_SPRETEiJ_G0016767	Zc3h10	100	96.782	ENSCJAG00000045638	ZC3H10	100	96.782	Callithrix_jacchus
MGP_SPRETEiJ_G0016767	Zc3h10	100	96.092	ENSCAFG00000000104	ZC3H10	100	96.092	Canis_familiaris
MGP_SPRETEiJ_G0016767	Zc3h10	100	96.092	ENSCAFG00020025996	ZC3H10	100	96.092	Canis_lupus_dingo
MGP_SPRETEiJ_G0016767	Zc3h10	100	96.322	ENSCHIG00000003359	ZC3H10	100	96.322	Capra_hircus
MGP_SPRETEiJ_G0016767	Zc3h10	100	97.241	ENSTSYG00000014379	ZC3H10	100	97.241	Carlito_syrichta
MGP_SPRETEiJ_G0016767	Zc3h10	92	95.489	ENSCAPG00000002936	ZC3H10	100	95.489	Cavia_aperea
MGP_SPRETEiJ_G0016767	Zc3h10	100	96.092	ENSCPOG00000032639	ZC3H10	100	96.092	Cavia_porcellus
MGP_SPRETEiJ_G0016767	Zc3h10	100	95.402	ENSCCAG00000020214	-	100	95.172	Cebus_capucinus
MGP_SPRETEiJ_G0016767	Zc3h10	100	96.782	ENSCATG00000012691	ZC3H10	100	96.782	Cercocebus_atys
MGP_SPRETEiJ_G0016767	Zc3h10	100	96.782	ENSCLAG00000011346	ZC3H10	100	96.782	Chinchilla_lanigera
MGP_SPRETEiJ_G0016767	Zc3h10	100	96.782	ENSCSAG00000018893	ZC3H10	100	96.782	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0016767	Zc3h10	100	72.414	ENSCPBG00000012828	ZC3H10	95	77.834	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0016767	Zc3h10	100	96.782	ENSCANG00000007357	ZC3H10	100	96.782	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0016767	Zc3h10	100	97.701	ENSCGRG00001004310	Zc3h10	100	97.701	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0016767	Zc3h10	100	97.701	ENSCGRG00000015981	Zc3h10	100	97.701	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0016767	Zc3h10	91	71.918	ENSCSEG00000003687	zc3h10	86	45.885	Cynoglossus_semilaevis
MGP_SPRETEiJ_G0016767	Zc3h10	89	75.397	ENSCVAG00000001548	zc3h10	86	46.154	Cyprinodon_variegatus
MGP_SPRETEiJ_G0016767	Zc3h10	83	75.000	ENSDARG00000030335	zc3h10	87	77.519	Danio_rerio
MGP_SPRETEiJ_G0016767	Zc3h10	100	96.782	ENSDNOG00000040571	ZC3H10	100	96.782	Dasypus_novemcinctus
MGP_SPRETEiJ_G0016767	Zc3h10	100	96.092	ENSDORG00000001081	Zc3h10	100	96.092	Dipodomys_ordii
MGP_SPRETEiJ_G0016767	Zc3h10	100	96.552	ENSEASG00005003533	ZC3H10	100	96.552	Equus_asinus_asinus
MGP_SPRETEiJ_G0016767	Zc3h10	100	96.782	ENSECAG00000013003	ZC3H10	100	96.782	Equus_caballus
MGP_SPRETEiJ_G0016767	Zc3h10	100	96.552	ENSFDAG00000012558	ZC3H10	100	96.552	Fukomys_damarensis
MGP_SPRETEiJ_G0016767	Zc3h10	89	74.219	ENSFHEG00000021836	zc3h10	93	64.935	Fundulus_heteroclitus
MGP_SPRETEiJ_G0016767	Zc3h10	100	72.706	ENSGALG00000037941	ZC3H10	95	78.141	Gallus_gallus
MGP_SPRETEiJ_G0016767	Zc3h10	89	75.000	ENSGAFG00000002137	zc3h10	81	46.122	Gambusia_affinis
MGP_SPRETEiJ_G0016767	Zc3h10	88	76.984	ENSGACG00000000638	zc3h10	90	66.334	Gasterosteus_aculeatus
MGP_SPRETEiJ_G0016767	Zc3h10	100	72.644	ENSGAGG00000020590	ZC3H10	95	78.086	Gopherus_agassizii
MGP_SPRETEiJ_G0016767	Zc3h10	100	96.322	ENSGGOG00000039636	ZC3H10	100	96.322	Gorilla_gorilla
MGP_SPRETEiJ_G0016767	Zc3h10	100	97.011	ENSHGLG00000015956	ZC3H10	100	97.011	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0016767	Zc3h10	100	97.011	ENSHGLG00100013005	ZC3H10	100	97.011	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0016767	Zc3h10	83	74.884	ENSHCOG00000020331	zc3h10	99	57.789	Hippocampus_comes
MGP_SPRETEiJ_G0016767	Zc3h10	91	59.081	ENSIPUG00000001697	zc3h10	85	74.419	Ictalurus_punctatus
MGP_SPRETEiJ_G0016767	Zc3h10	100	96.782	ENSSTOG00000007753	ZC3H10	100	96.782	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0016767	Zc3h10	100	95.632	ENSJJAG00000001726	Zc3h10	100	95.632	Jaculus_jaculus
MGP_SPRETEiJ_G0016767	Zc3h10	89	75.969	ENSKMAG00000017905	zc3h10	85	45.929	Kryptolebias_marmoratus
MGP_SPRETEiJ_G0016767	Zc3h10	79	77.344	ENSLBEG00000018281	zc3h10	59	77.344	Labrus_bergylta
MGP_SPRETEiJ_G0016767	Zc3h10	100	65.604	ENSLACG00000002390	ZC3H10	100	64.009	Latimeria_chalumnae
MGP_SPRETEiJ_G0016767	Zc3h10	100	95.632	ENSLAFG00000014817	ZC3H10	100	95.632	Loxodonta_africana
MGP_SPRETEiJ_G0016767	Zc3h10	100	96.782	ENSMFAG00000027256	ZC3H10	100	96.782	Macaca_fascicularis
MGP_SPRETEiJ_G0016767	Zc3h10	100	96.782	ENSMMUG00000021084	ZC3H10	100	96.782	Macaca_mulatta
MGP_SPRETEiJ_G0016767	Zc3h10	100	96.782	ENSMNEG00000025282	ZC3H10	100	96.782	Macaca_nemestrina
MGP_SPRETEiJ_G0016767	Zc3h10	100	96.782	ENSMLEG00000027930	ZC3H10	100	96.782	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0016767	Zc3h10	81	76.190	ENSMAMG00000003284	zc3h10	61	77.778	Mastacembelus_armatus
MGP_SPRETEiJ_G0016767	Zc3h10	100	97.471	ENSMAUG00000008505	Zc3h10	100	97.471	Mesocricetus_auratus
MGP_SPRETEiJ_G0016767	Zc3h10	100	97.011	ENSMOCG00000019869	Zc3h10	100	97.011	Microtus_ochrogaster
MGP_SPRETEiJ_G0016767	Zc3h10	83	74.627	ENSMMOG00000021874	zc3h10	86	47.412	Mola_mola
MGP_SPRETEiJ_G0016767	Zc3h10	85	76.959	ENSMALG00000016443	zc3h10	85	46.074	Monopterus_albus
MGP_SPRETEiJ_G0016767	Zc3h10	100	99.310	MGP_CAROLIEiJ_G0015942	Zc3h10	100	99.310	Mus_caroli
MGP_SPRETEiJ_G0016767	Zc3h10	100	99.540	ENSMUSG00000039810	Zc3h10	100	99.540	Mus_musculus
MGP_SPRETEiJ_G0016767	Zc3h10	100	99.540	MGP_PahariEiJ_G0031142	Zc3h10	100	99.540	Mus_pahari
MGP_SPRETEiJ_G0016767	Zc3h10	100	96.552	ENSMPUG00000018496	ZC3H10	100	96.552	Mustela_putorius_furo
MGP_SPRETEiJ_G0016767	Zc3h10	100	91.954	ENSMLUG00000006564	ZC3H10	100	92.184	Myotis_lucifugus
MGP_SPRETEiJ_G0016767	Zc3h10	100	97.471	ENSNGAG00000011848	Zc3h10	100	97.471	Nannospalax_galili
MGP_SPRETEiJ_G0016767	Zc3h10	79	76.562	ENSNBRG00000020931	zc3h10	86	47.521	Neolamprologus_brichardi
MGP_SPRETEiJ_G0016767	Zc3h10	100	86.957	ENSMEUG00000001222	ZC3H10	100	88.330	Notamacropus_eugenii
MGP_SPRETEiJ_G0016767	Zc3h10	100	96.552	ENSODEG00000007942	ZC3H10	100	96.552	Octodon_degus
MGP_SPRETEiJ_G0016767	Zc3h10	100	65.702	ENSONIG00000019154	zc3h10	90	66.830	Oreochromis_niloticus
MGP_SPRETEiJ_G0016767	Zc3h10	100	95.183	ENSOCUG00000017349	ZC3H10	100	95.183	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0016767	Zc3h10	89	73.043	ENSORLG00000014596	zc3h10	87	46.138	Oryzias_latipes
MGP_SPRETEiJ_G0016767	Zc3h10	89	72.609	ENSORLG00020000559	zc3h10	87	45.929	Oryzias_latipes_hni
MGP_SPRETEiJ_G0016767	Zc3h10	97	44.618	ENSORLG00015014077	zc3h10	87	46.138	Oryzias_latipes_hsok
MGP_SPRETEiJ_G0016767	Zc3h10	88	72.609	ENSOMEG00000023135	zc3h10	87	46.347	Oryzias_melastigma
MGP_SPRETEiJ_G0016767	Zc3h10	100	95.632	ENSOGAG00000030676	ZC3H10	100	95.632	Otolemur_garnettii
MGP_SPRETEiJ_G0016767	Zc3h10	100	93.333	ENSOARG00000010330	ZC3H10	100	93.333	Ovis_aries
MGP_SPRETEiJ_G0016767	Zc3h10	100	96.552	ENSPPAG00000023790	ZC3H10	100	96.552	Pan_paniscus
MGP_SPRETEiJ_G0016767	Zc3h10	100	97.701	ENSPTIG00000006237	ZC3H10	100	97.701	Panthera_tigris_altaica
MGP_SPRETEiJ_G0016767	Zc3h10	100	96.552	ENSPTRG00000005078	ZC3H10	100	96.552	Pan_troglodytes
MGP_SPRETEiJ_G0016767	Zc3h10	100	96.782	ENSPANG00000029620	ZC3H10	100	96.782	Papio_anubis
MGP_SPRETEiJ_G0016767	Zc3h10	84	76.429	ENSPKIG00000007158	zc3h10	84	47.314	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0016767	Zc3h10	86	69.624	ENSPSIG00000000811	ZC3H10	82	74.850	Pelodiscus_sinensis
MGP_SPRETEiJ_G0016767	Zc3h10	94	67.290	ENSPMGG00000010570	zc3h10	92	64.563	Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0016767	Zc3h10	100	97.471	ENSPEMG00000008278	Zc3h10	100	97.471	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0016767	Zc3h10	100	85.616	ENSPCIG00000007018	ZC3H10	100	88.356	Phascolarctos_cinereus
MGP_SPRETEiJ_G0016767	Zc3h10	89	74.219	ENSPFOG00000006164	zc3h10	85	45.773	Poecilia_formosa
MGP_SPRETEiJ_G0016767	Zc3h10	91	66.058	ENSPLAG00000001248	zc3h10	85	45.773	Poecilia_latipinna
MGP_SPRETEiJ_G0016767	Zc3h10	89	74.219	ENSPMEG00000002660	zc3h10	85	45.267	Poecilia_mexicana
MGP_SPRETEiJ_G0016767	Zc3h10	89	74.219	ENSPREG00000015323	zc3h10	85	45.979	Poecilia_reticulata
MGP_SPRETEiJ_G0016767	Zc3h10	100	77.241	ENSPPYG00000004644	ZC3H10	100	76.782	Pongo_abelii
MGP_SPRETEiJ_G0016767	Zc3h10	100	96.092	ENSPCAG00000005636	ZC3H10	100	96.092	Procavia_capensis
MGP_SPRETEiJ_G0016767	Zc3h10	100	95.632	ENSPCOG00000012389	ZC3H10	100	95.632	Propithecus_coquereli
MGP_SPRETEiJ_G0016767	Zc3h10	100	95.402	ENSPVAG00000007566	ZC3H10	100	95.402	Pteropus_vampyrus
MGP_SPRETEiJ_G0016767	Zc3h10	79	76.562	ENSPNYG00000021193	zc3h10	86	47.619	Pundamilia_nyererei
MGP_SPRETEiJ_G0016767	Zc3h10	76	79.208	ENSPNAG00000013796	zc3h10	57	77.500	Pygocentrus_nattereri
MGP_SPRETEiJ_G0016767	Zc3h10	100	98.391	ENSRNOG00000040281	Zc3h10	100	98.391	Rattus_norvegicus
MGP_SPRETEiJ_G0016767	Zc3h10	100	96.552	ENSRBIG00000019615	ZC3H10	100	96.552	Rhinopithecus_bieti
MGP_SPRETEiJ_G0016767	Zc3h10	100	96.552	ENSRROG00000013225	ZC3H10	100	96.552	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0016767	Zc3h10	100	96.782	ENSSBOG00000019876	ZC3H10	100	96.782	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0016767	Zc3h10	100	86.270	ENSSHAG00000005568	ZC3H10	100	87.643	Sarcophilus_harrisii
MGP_SPRETEiJ_G0016767	Zc3h10	79	78.571	ENSSFOG00015015320	zc3h10	92	64.118	Scleropages_formosus
MGP_SPRETEiJ_G0016767	Zc3h10	79	75.576	ENSSMAG00000003388	zc3h10	87	45.791	Scophthalmus_maximus
MGP_SPRETEiJ_G0016767	Zc3h10	82	75.781	ENSSDUG00000006067	zc3h10	86	46.721	Seriola_dumerili
MGP_SPRETEiJ_G0016767	Zc3h10	82	75.781	ENSSLDG00000002721	zc3h10	86	46.721	Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0016767	Zc3h10	73	97.973	ENSSARG00000007208	ZC3H10	73	97.973	Sorex_araneus
MGP_SPRETEiJ_G0016767	Zc3h10	100	72.874	ENSSPUG00000014715	ZC3H10	94	77.078	Sphenodon_punctatus
MGP_SPRETEiJ_G0016767	Zc3h10	83	76.852	ENSSPAG00000001210	zc3h10	61	76.562	Stegastes_partitus
MGP_SPRETEiJ_G0016767	Zc3h10	100	96.552	ENSSSCG00000033568	ZC3H10	100	96.552	Sus_scrofa
MGP_SPRETEiJ_G0016767	Zc3h10	88	76.744	ENSTRUG00000009733	zc3h10	86	46.862	Takifugu_rubripes
MGP_SPRETEiJ_G0016767	Zc3h10	91	67.874	ENSTNIG00000014558	zc3h10	95	66.667	Tetraodon_nigroviridis
MGP_SPRETEiJ_G0016767	Zc3h10	100	95.862	ENSTTRG00000016415	ZC3H10	100	95.862	Tursiops_truncatus
MGP_SPRETEiJ_G0016767	Zc3h10	100	91.939	ENSUAMG00000010526	ZC3H10	100	91.939	Ursus_americanus
MGP_SPRETEiJ_G0016767	Zc3h10	100	97.011	ENSUMAG00000016780	ZC3H10	100	97.011	Ursus_maritimus
MGP_SPRETEiJ_G0016767	Zc3h10	100	96.322	ENSVPAG00000009524	ZC3H10	100	96.322	Vicugna_pacos
MGP_SPRETEiJ_G0016767	Zc3h10	100	96.092	ENSVVUG00000021999	ZC3H10	100	96.092	Vulpes_vulpes
MGP_SPRETEiJ_G0016767	Zc3h10	94	63.279	ENSXETG00000009476	zc3h10	95	65.155	Xenopus_tropicalis
MGP_SPRETEiJ_G0016767	Zc3h10	87	75.000	ENSXCOG00000018650	zc3h10	85	46.488	Xiphophorus_couchianus
MGP_SPRETEiJ_G0016767	Zc3h10	89	75.000	ENSXMAG00000002294	zc3h10	85	45.963	Xiphophorus_maculatus