EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0016774 (Gene tree)
Gene ID: -
Gene Symbol: Rab5b
Alias: C030027M18Rik
Full Name: RAB5B%2C member RAS oncogene family
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Minus strand
Length: 19252 bases
Position: chr10:130060772-130080023
Accession: 105938
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0026482	MMR_HSR1	PF01926.23	0.0003	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0026482	-	3170	-	MGP_SPRETEiJ_P0026482	215 (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0016774's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0016774's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_SPRETEiJ_G0016774	Rab5b	90	35.323	MGP_SPRETEiJ_G0034594	Rab9b	97	35.323
MGP_SPRETEiJ_G0016774	Rab5b	62	30.282	MGP_SPRETEiJ_G0029733	Arl8b	73	30.282
MGP_SPRETEiJ_G0016774	Rab5b	90	47.423	MGP_SPRETEiJ_G0025672	Rab22a	98	47.423
MGP_SPRETEiJ_G0016774	Rab5b	82	38.798	MGP_SPRETEiJ_G0025911	Rab33b	79	38.587
MGP_SPRETEiJ_G0016774	Rab5b	74	37.500	MGP_SPRETEiJ_G0014820	Rab23	67	37.500
MGP_SPRETEiJ_G0016774	Rab5b	80	33.333	MGP_SPRETEiJ_G0028777	-	89	33.333
MGP_SPRETEiJ_G0016774	Rab5b	90	37.436	MGP_SPRETEiJ_G0028630	Rab35	96	37.436
MGP_SPRETEiJ_G0016774	Rab5b	91	40.686	MGP_SPRETEiJ_G0026114	Rab25	94	40.686
MGP_SPRETEiJ_G0016774	Rab5b	86	40.217	MGP_SPRETEiJ_G0020130	Rab2b	85	40.217
MGP_SPRETEiJ_G0016774	Rab5b	75	44.720	MGP_SPRETEiJ_G0024394	Rab14	89	41.481
MGP_SPRETEiJ_G0016774	Rab5b	76	33.129	MGP_SPRETEiJ_G0030206	Rasl2-9	74	33.129
MGP_SPRETEiJ_G0016774	Rab5b	60	32.308	MGP_SPRETEiJ_G0031792	-	68	32.308
MGP_SPRETEiJ_G0016774	Rab5b	77	46.386	MGP_SPRETEiJ_G0033730	Rab6b	80	46.386
MGP_SPRETEiJ_G0016774	Rab5b	78	41.860	MGP_SPRETEiJ_G0029636	Rab7	88	45.455
MGP_SPRETEiJ_G0016774	Rab5b	94	41.346	MGP_SPRETEiJ_G0018231	Rab37	93	41.346
MGP_SPRETEiJ_G0016774	Rab5b	90	38.462	MGP_SPRETEiJ_G0022894	Rab18	93	38.462
MGP_SPRETEiJ_G0016774	Rab5b	83	30.000	MGP_SPRETEiJ_G0026395	Nras	99	32.667
MGP_SPRETEiJ_G0016774	Rab5b	78	35.294	MGP_SPRETEiJ_G0034360	Rab39b	80	35.294
MGP_SPRETEiJ_G0016774	Rab5b	75	47.205	MGP_SPRETEiJ_G0033485	Rab11a	88	48.889
MGP_SPRETEiJ_G0016774	Rab5b	83	37.158	MGP_SPRETEiJ_G0034202	Rab33a	77	37.158
MGP_SPRETEiJ_G0016774	Rab5b	90	43.367	MGP_SPRETEiJ_G0016958	Rab1a	96	43.367
MGP_SPRETEiJ_G0016774	Rab5b	91	46.939	MGP_SPRETEiJ_G0022741	Rab31	98	46.939
MGP_SPRETEiJ_G0016774	Rab5b	73	35.000	MGP_SPRETEiJ_G0016248	Rab36	60	35.000
MGP_SPRETEiJ_G0016774	Rab5b	77	45.783	MGP_SPRETEiJ_G0031162	Rab6a	80	45.783
MGP_SPRETEiJ_G0016774	Rab5b	91	37.949	MGP_SPRETEiJ_G0026744	Rab2a	76	43.478
MGP_SPRETEiJ_G0016774	Rab5b	82	36.932	MGP_SPRETEiJ_G0018720	Rab15	83	36.932
MGP_SPRETEiJ_G0016774	Rab5b	97	85.646	MGP_SPRETEiJ_G0018027	Rab5c	97	85.646
MGP_SPRETEiJ_G0016774	Rab5b	74	37.195	MGP_SPRETEiJ_G0021073	Rabl2	72	37.195
MGP_SPRETEiJ_G0016774	Rab5b	91	43.689	MGP_SPRETEiJ_G0022327	Rab11b	89	48.872
MGP_SPRETEiJ_G0016774	Rab5b	78	42.262	MGP_SPRETEiJ_G0031102	Rab30	83	42.262
MGP_SPRETEiJ_G0016774	Rab5b	85	34.783	MGP_SPRETEiJ_G0022750	Rab12	63	34.783
MGP_SPRETEiJ_G0016774	Rab5b	62	30.986	MGP_SPRETEiJ_G0015439	Arl8a	73	30.986
MGP_SPRETEiJ_G0016774	Rab5b	76	32.121	MGP_SPRETEiJ_G0030102	Kras	88	31.737
MGP_SPRETEiJ_G0016774	Rab5b	82	33.333	MGP_SPRETEiJ_G0028020	Rheb	93	33.333
MGP_SPRETEiJ_G0016774	Rab5b	55	30.159	MGP_SPRETEiJ_G0018557	Arl4a	60	30.159
MGP_SPRETEiJ_G0016774	Rab5b	82	45.198	MGP_SPRETEiJ_G0023450	Rab1b	87	45.198

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0016774	Rab5b	100	99.535	ENSG00000111540	RAB5B	100	99.535	Homo_sapiens
MGP_SPRETEiJ_G0016774	Rab5b	100	98.157	ENSAMEG00000003196	RAB5B	100	98.157	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0016774	Rab5b	100	95.814	ENSACAG00000005380	RAB5B	100	95.814	Anolis_carolinensis
MGP_SPRETEiJ_G0016774	Rab5b	100	99.535	ENSANAG00000033215	RAB5B	95	99.535	Aotus_nancymaae
MGP_SPRETEiJ_G0016774	Rab5b	100	99.070	ENSBTAG00000014129	RAB5B	100	99.070	Bos_taurus
MGP_SPRETEiJ_G0016774	Rab5b	100	99.535	ENSCJAG00000041780	RAB5B	95	99.535	Callithrix_jacchus
MGP_SPRETEiJ_G0016774	Rab5b	100	99.535	ENSCAFG00000000087	RAB5B	100	99.535	Canis_familiaris
MGP_SPRETEiJ_G0016774	Rab5b	100	99.535	ENSCAFG00020026094	RAB5B	100	99.535	Canis_lupus_dingo
MGP_SPRETEiJ_G0016774	Rab5b	97	99.519	ENSCHIG00000010333	RAB5B	96	99.519	Capra_hircus
MGP_SPRETEiJ_G0016774	Rab5b	100	99.070	ENSTSYG00000009576	RAB5B	100	99.070	Carlito_syrichta
MGP_SPRETEiJ_G0016774	Rab5b	100	99.535	ENSCPOG00000034818	RAB5B	100	99.535	Cavia_porcellus
MGP_SPRETEiJ_G0016774	Rab5b	100	98.605	ENSCCAG00000019480	RAB5B	100	98.605	Cebus_capucinus
MGP_SPRETEiJ_G0016774	Rab5b	83	98.883	ENSCATG00000034978	RAB5B	98	98.883	Cercocebus_atys
MGP_SPRETEiJ_G0016774	Rab5b	100	98.605	ENSCSAG00000005277	RAB5B	100	98.605	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0016774	Rab5b	100	95.814	ENSCPBG00000012712	RAB5B	100	95.814	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0016774	Rab5b	100	99.070	ENSCGRG00001000428	Rab5b	100	99.070	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0016774	Rab5b	100	99.070	ENSCGRG00000009508	-	100	99.070	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0016774	Rab5b	100	99.535	ENSDORG00000025063	Rab5b	100	99.535	Dipodomys_ordii
MGP_SPRETEiJ_G0016774	Rab5b	100	99.070	ENSECAG00000023306	RAB5B	100	99.070	Equus_caballus
MGP_SPRETEiJ_G0016774	Rab5b	100	98.605	ENSEEUG00000006745	RAB5B	100	98.605	Erinaceus_europaeus
MGP_SPRETEiJ_G0016774	Rab5b	100	99.535	ENSFDAG00000008326	RAB5B	100	99.535	Fukomys_damarensis
MGP_SPRETEiJ_G0016774	Rab5b	100	98.605	ENSHGLG00000005995	RAB5B	100	98.605	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0016774	Rab5b	100	98.605	ENSHGLG00100012955	RAB5B	100	98.605	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0016774	Rab5b	100	98.140	ENSSTOG00000010536	RAB5B	100	98.140	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0016774	Rab5b	100	99.070	ENSJJAG00000019506	Rab5b	100	99.070	Jaculus_jaculus
MGP_SPRETEiJ_G0016774	Rab5b	100	98.618	ENSLAFG00000018009	RAB5B	95	98.618	Loxodonta_africana
MGP_SPRETEiJ_G0016774	Rab5b	100	98.605	ENSMFAG00000029992	RAB5B	100	98.605	Macaca_fascicularis
MGP_SPRETEiJ_G0016774	Rab5b	100	98.605	ENSMMUG00000031853	RAB5B	100	98.605	Macaca_mulatta
MGP_SPRETEiJ_G0016774	Rab5b	100	98.605	ENSMNEG00000005338	RAB5B	100	98.605	Macaca_nemestrina
MGP_SPRETEiJ_G0016774	Rab5b	100	98.605	ENSMLEG00000034462	RAB5B	100	98.605	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0016774	Rab5b	100	99.535	ENSMAUG00000011613	Rab5b	100	99.535	Mesocricetus_auratus
MGP_SPRETEiJ_G0016774	Rab5b	100	99.070	ENSMICG00000011086	RAB5B	100	99.070	Microcebus_murinus
MGP_SPRETEiJ_G0016774	Rab5b	100	99.535	ENSMUSG00000000711	Rab5b	100	99.535	Mus_musculus
MGP_SPRETEiJ_G0016774	Rab5b	100	99.535	MGP_PahariEiJ_G0031135	Rab5b	100	99.535	Mus_pahari
MGP_SPRETEiJ_G0016774	Rab5b	99	98.148	ENSMPUG00000000946	RAB5B	89	98.148	Mustela_putorius_furo
MGP_SPRETEiJ_G0016774	Rab5b	100	99.535	ENSNLEG00000017570	-	100	99.535	Nomascus_leucogenys
MGP_SPRETEiJ_G0016774	Rab5b	100	99.535	ENSOPRG00000007883	RAB5B	100	99.535	Ochotona_princeps
MGP_SPRETEiJ_G0016774	Rab5b	100	99.070	ENSODEG00000003860	RAB5B	100	99.070	Octodon_degus
MGP_SPRETEiJ_G0016774	Rab5b	100	99.535	ENSOCUG00000013895	RAB5B	95	99.535	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0016774	Rab5b	100	99.535	ENSOARG00000010651	RAB5B	95	99.535	Ovis_aries
MGP_SPRETEiJ_G0016774	Rab5b	100	99.535	ENSPPAG00000035431	RAB5B	100	99.535	Pan_paniscus
MGP_SPRETEiJ_G0016774	Rab5b	100	99.535	ENSPTRG00000005071	RAB5B	97	99.043	Pan_troglodytes
MGP_SPRETEiJ_G0016774	Rab5b	99	97.664	ENSPANG00000021075	RAB5B	97	97.664	Papio_anubis
MGP_SPRETEiJ_G0016774	Rab5b	100	99.535	ENSPCOG00000016461	RAB5B	100	99.535	Propithecus_coquereli
MGP_SPRETEiJ_G0016774	Rab5b	100	98.605	ENSRNOG00000006130	Rab5b	100	98.605	Rattus_norvegicus
MGP_SPRETEiJ_G0016774	Rab5b	100	98.605	ENSRBIG00000013165	RAB5B	100	98.605	Rhinopithecus_bieti
MGP_SPRETEiJ_G0016774	Rab5b	100	98.605	ENSRROG00000037973	RAB5B	100	98.605	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0016774	Rab5b	100	82.791	ENSSBOG00000035419	RAB5B	100	82.791	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0016774	Rab5b	100	98.140	ENSSHAG00000007727	RAB5B	100	98.140	Sarcophilus_harrisii
MGP_SPRETEiJ_G0016774	Rab5b	100	99.535	ENSSARG00000006237	RAB5B	100	99.535	Sorex_araneus
MGP_SPRETEiJ_G0016774	Rab5b	100	95.814	ENSSPUG00000014873	RAB5B	100	95.814	Sphenodon_punctatus
MGP_SPRETEiJ_G0016774	Rab5b	100	99.535	ENSTTRG00000015001	RAB5B	100	99.535	Tursiops_truncatus
MGP_SPRETEiJ_G0016774	Rab5b	100	99.070	ENSUAMG00000014651	RAB5B	100	99.070	Ursus_americanus
MGP_SPRETEiJ_G0016774	Rab5b	100	99.070	ENSUMAG00000016263	RAB5B	100	99.070	Ursus_maritimus
MGP_SPRETEiJ_G0016774	Rab5b	68	99.315	ENSVVUG00000022054	RAB5B	81	99.315	Vulpes_vulpes