EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0016778 (Gene tree)
Gene ID: -
Gene Symbol: Pym1
Alias: A030010B05Rik|PYM Protein|Pym|Wibg
Full Name: PYM homolog 1%2C exon junction complex associated factor
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Plus strand
Length: 18591 bases
Position: chr10:130134341-130152931
Accession: 1925678
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0026489	Mago-bind	PF09282.10	1.3e-13	1	1
MGP_SPRETEiJ_P0026488	Mago-bind	PF09282.10	3e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0026489	-	1177	-	MGP_SPRETEiJ_P0026489	202 (aa)	-	-
MGP_SPRETEiJ_T0026488	-	1185	-	MGP_SPRETEiJ_P0026488	203 (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0016778's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0016778's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0016778	Pym1	94	91.623	ENSG00000170473	PYM1	94	91.623	Homo_sapiens
MGP_SPRETEiJ_G0016778	Pym1	99	57.277	ENSAPOG00000023045	pym1	93	58.209	Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0016778	Pym1	93	86.170	ENSAMEG00000003091	PYM1	93	86.170	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0016778	Pym1	99	56.279	ENSACIG00000012769	pym1	94	57.488	Amphilophus_citrinellus
MGP_SPRETEiJ_G0016778	Pym1	99	56.872	ENSAOCG00000021358	pym1	94	58.128	Amphiprion_ocellaris
MGP_SPRETEiJ_G0016778	Pym1	99	56.872	ENSAPEG00000022679	pym1	94	58.128	Amphiprion_percula
MGP_SPRETEiJ_G0016778	Pym1	99	55.399	ENSATEG00000024022	pym1	93	59.000	Anabas_testudineus
MGP_SPRETEiJ_G0016778	Pym1	94	66.010	ENSACAG00000005714	PYM1	94	66.010	Anolis_carolinensis
MGP_SPRETEiJ_G0016778	Pym1	94	90.576	ENSANAG00000036967	PYM1	94	90.576	Aotus_nancymaae
MGP_SPRETEiJ_G0016778	Pym1	100	55.046	ENSAMXG00000007650	pym1	92	59.113	Astyanax_mexicanus
MGP_SPRETEiJ_G0016778	Pym1	94	89.005	ENSBTAG00000031146	PYM1	94	89.005	Bos_taurus
MGP_SPRETEiJ_G0016778	Pym1	94	90.576	ENSCJAG00000041077	PYM1	94	90.576	Callithrix_jacchus
MGP_SPRETEiJ_G0016778	Pym1	94	91.099	ENSCAFG00000000076	PYM1	94	91.099	Canis_familiaris
MGP_SPRETEiJ_G0016778	Pym1	94	91.099	ENSCAFG00020026099	PYM1	94	91.099	Canis_lupus_dingo
MGP_SPRETEiJ_G0016778	Pym1	94	87.958	ENSCHIG00000026207	PYM1	94	87.958	Capra_hircus
MGP_SPRETEiJ_G0016778	Pym1	94	89.005	ENSTSYG00000000787	PYM1	94	89.005	Carlito_syrichta
MGP_SPRETEiJ_G0016778	Pym1	88	89.944	ENSCAPG00000010374	PYM1	94	89.944	Cavia_aperea
MGP_SPRETEiJ_G0016778	Pym1	94	90.576	ENSCPOG00000031546	PYM1	94	90.576	Cavia_porcellus
MGP_SPRETEiJ_G0016778	Pym1	94	91.099	ENSCCAG00000026187	PYM1	94	91.099	Cebus_capucinus
MGP_SPRETEiJ_G0016778	Pym1	94	91.099	ENSCATG00000018801	PYM1	94	91.099	Cercocebus_atys
MGP_SPRETEiJ_G0016778	Pym1	94	85.864	ENSCLAG00000007964	PYM1	94	85.864	Chinchilla_lanigera
MGP_SPRETEiJ_G0016778	Pym1	89	90.556	ENSCSAG00000005291	PYM1	93	90.055	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0016778	Pym1	98	38.756	ENSCING00000006448	-	93	41.414	Ciona_intestinalis
MGP_SPRETEiJ_G0016778	Pym1	98	36.444	ENSCSAVG00000009805	-	89	38.500	Ciona_savignyi
MGP_SPRETEiJ_G0016778	Pym1	94	91.099	ENSCANG00000020338	-	94	91.099	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0016778	Pym1	98	84.264	ENSCANG00000019757	-	87	86.316	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0016778	Pym1	94	78.947	ENSCGRG00001004231	-	93	81.152	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0016778	Pym1	94	95.263	ENSCGRG00001018051	-	94	95.263	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0016778	Pym1	94	78.947	ENSCGRG00000018933	-	93	81.152	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0016778	Pym1	94	95.263	ENSCGRG00000012495	-	94	95.263	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0016778	Pym1	94	56.000	ENSCSEG00000021531	pym1	93	58.201	Cynoglossus_semilaevis
MGP_SPRETEiJ_G0016778	Pym1	94	57.214	ENSCVAG00000017360	pym1	79	58.511	Cyprinodon_variegatus
MGP_SPRETEiJ_G0016778	Pym1	99	58.291	ENSDARG00000046024	pym1	92	56.373	Danio_rerio
MGP_SPRETEiJ_G0016778	Pym1	94	87.435	ENSDNOG00000048414	PYM1	86	87.435	Dasypus_novemcinctus
MGP_SPRETEiJ_G0016778	Pym1	94	91.099	ENSDORG00000029448	Pym1	94	91.099	Dipodomys_ordii
MGP_SPRETEiJ_G0016778	Pym1	97	33.182	FBgn0034918	Pym	92	33.816	Drosophila_melanogaster
MGP_SPRETEiJ_G0016778	Pym1	89	83.799	ENSETEG00000004461	-	94	83.799	Echinops_telfairi
MGP_SPRETEiJ_G0016778	Pym1	93	86.170	ENSEASG00005002271	PYM1	85	86.170	Equus_asinus_asinus
MGP_SPRETEiJ_G0016778	Pym1	94	90.576	ENSECAG00000011870	PYM1	94	90.576	Equus_caballus
MGP_SPRETEiJ_G0016778	Pym1	96	57.789	ENSELUG00000024250	pym1	94	58.163	Esox_lucius
MGP_SPRETEiJ_G0016778	Pym1	94	90.052	ENSFCAG00000013967	PYM1	94	90.052	Felis_catus
MGP_SPRETEiJ_G0016778	Pym1	94	90.052	ENSFDAG00000006314	PYM1	94	90.052	Fukomys_damarensis
MGP_SPRETEiJ_G0016778	Pym1	93	56.281	ENSFHEG00000005884	pym1	93	56.281	Fundulus_heteroclitus
MGP_SPRETEiJ_G0016778	Pym1	94	55.779	ENSGMOG00000007239	pym1	93	55.779	Gadus_morhua
MGP_SPRETEiJ_G0016778	Pym1	94	70.256	ENSGALG00000046169	PYM1	94	71.066	Gallus_gallus
MGP_SPRETEiJ_G0016778	Pym1	99	57.746	ENSGAFG00000003280	pym1	93	57.711	Gambusia_affinis
MGP_SPRETEiJ_G0016778	Pym1	100	52.683	ENSGACG00000010703	pym1	92	55.208	Gasterosteus_aculeatus
MGP_SPRETEiJ_G0016778	Pym1	92	63.235	ENSGAGG00000001973	PYM1	88	63.235	Gopherus_agassizii
MGP_SPRETEiJ_G0016778	Pym1	94	91.099	ENSGGOG00000043246	PYM1	94	91.099	Gorilla_gorilla
MGP_SPRETEiJ_G0016778	Pym1	93	57.000	ENSHBUG00000012719	pym1	94	57.635	Haplochromis_burtoni
MGP_SPRETEiJ_G0016778	Pym1	94	90.576	ENSHGLG00000017155	PYM1	94	90.576	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0016778	Pym1	94	90.576	ENSHGLG00100015341	PYM1	94	90.576	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0016778	Pym1	99	59.615	ENSHCOG00000007987	pym1	80	60.204	Hippocampus_comes
MGP_SPRETEiJ_G0016778	Pym1	100	57.143	ENSIPUG00000005975	wibga	93	57.921	Ictalurus_punctatus
MGP_SPRETEiJ_G0016778	Pym1	94	92.147	ENSSTOG00000014206	PYM1	94	92.147	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0016778	Pym1	94	90.052	ENSJJAG00000013338	Pym1	94	90.052	Jaculus_jaculus
MGP_SPRETEiJ_G0016778	Pym1	99	55.157	ENSKMAG00000006351	pym1	93	55.450	Kryptolebias_marmoratus
MGP_SPRETEiJ_G0016778	Pym1	99	56.250	ENSLBEG00000015707	pym1	93	56.633	Labrus_bergylta
MGP_SPRETEiJ_G0016778	Pym1	93	56.219	ENSLACG00000014398	PYM1	93	56.219	Latimeria_chalumnae
MGP_SPRETEiJ_G0016778	Pym1	94	89.005	ENSLAFG00000002369	PYM1	94	89.005	Loxodonta_africana
MGP_SPRETEiJ_G0016778	Pym1	94	91.099	ENSMFAG00000003048	PYM1	94	91.099	Macaca_fascicularis
MGP_SPRETEiJ_G0016778	Pym1	94	91.099	ENSMMUG00000011002	PYM1	94	91.099	Macaca_mulatta
MGP_SPRETEiJ_G0016778	Pym1	94	91.099	ENSMNEG00000034677	PYM1	94	91.099	Macaca_nemestrina
MGP_SPRETEiJ_G0016778	Pym1	94	91.099	ENSMLEG00000007971	PYM1	94	91.099	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0016778	Pym1	99	56.621	ENSMAMG00000001588	pym1	93	57.971	Mastacembelus_armatus
MGP_SPRETEiJ_G0016778	Pym1	93	56.500	ENSMZEG00005026458	pym1	94	57.143	Maylandia_zebra
MGP_SPRETEiJ_G0016778	Pym1	94	94.211	ENSMAUG00000007318	Pym1	94	94.211	Mesocricetus_auratus
MGP_SPRETEiJ_G0016778	Pym1	94	89.529	ENSMICG00000032962	PYM1	94	89.529	Microcebus_murinus
MGP_SPRETEiJ_G0016778	Pym1	94	92.632	ENSMOCG00000010208	Pym1	94	92.632	Microtus_ochrogaster
MGP_SPRETEiJ_G0016778	Pym1	99	58.049	ENSMMOG00000009301	pym1	94	57.868	Mola_mola
MGP_SPRETEiJ_G0016778	Pym1	99	55.714	ENSMALG00000013496	pym1	93	56.716	Monopterus_albus
MGP_SPRETEiJ_G0016778	Pym1	100	98.522	MGP_CAROLIEiJ_G0015953	Pym1	100	98.522	Mus_caroli
MGP_SPRETEiJ_G0016778	Pym1	100	99.507	ENSMUSG00000064030	Pym1	100	99.507	Mus_musculus
MGP_SPRETEiJ_G0016778	Pym1	100	96.535	MGP_PahariEiJ_G0031131	Pym1	100	96.535	Mus_pahari
MGP_SPRETEiJ_G0016778	Pym1	94	90.576	ENSMPUG00000000931	PYM1	94	90.576	Mustela_putorius_furo
MGP_SPRETEiJ_G0016778	Pym1	94	83.246	ENSMLUG00000003586	PYM1	90	87.293	Myotis_lucifugus
MGP_SPRETEiJ_G0016778	Pym1	89	91.667	ENSNGAG00000019207	Pym1	87	92.179	Nannospalax_galili
MGP_SPRETEiJ_G0016778	Pym1	99	57.075	ENSNBRG00000006951	pym1	93	58.500	Neolamprologus_brichardi
MGP_SPRETEiJ_G0016778	Pym1	94	91.623	ENSNLEG00000017588	PYM1	94	91.623	Nomascus_leucogenys
MGP_SPRETEiJ_G0016778	Pym1	88	78.090	ENSMEUG00000001017	PYM1	93	77.966	Notamacropus_eugenii
MGP_SPRETEiJ_G0016778	Pym1	94	84.896	ENSOPRG00000007797	PYM1	94	84.896	Ochotona_princeps
MGP_SPRETEiJ_G0016778	Pym1	94	90.576	ENSODEG00000004289	PYM1	94	90.576	Octodon_degus
MGP_SPRETEiJ_G0016778	Pym1	93	56.158	ENSONIG00000016740	pym1	93	57.635	Oreochromis_niloticus
MGP_SPRETEiJ_G0016778	Pym1	89	88.889	ENSOCUG00000025969	PYM1	81	88.889	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0016778	Pym1	99	59.809	ENSORLG00000030592	pym1	93	60.204	Oryzias_latipes
MGP_SPRETEiJ_G0016778	Pym1	99	59.242	ENSORLG00020011264	pym1	93	60.101	Oryzias_latipes_hni
MGP_SPRETEiJ_G0016778	Pym1	99	60.577	ENSORLG00015005287	pym1	93	61.026	Oryzias_latipes_hsok
MGP_SPRETEiJ_G0016778	Pym1	99	60.680	ENSOMEG00000022250	pym1	93	60.825	Oryzias_melastigma
MGP_SPRETEiJ_G0016778	Pym1	89	90.000	ENSOGAG00000007038	PYM1	90	88.043	Otolemur_garnettii
MGP_SPRETEiJ_G0016778	Pym1	94	88.482	ENSOARG00000010856	PYM1	94	88.482	Ovis_aries
MGP_SPRETEiJ_G0016778	Pym1	94	91.623	ENSPPAG00000043630	PYM1	94	91.623	Pan_paniscus
MGP_SPRETEiJ_G0016778	Pym1	94	89.005	ENSPPRG00000013243	PYM1	94	89.005	Panthera_pardus
MGP_SPRETEiJ_G0016778	Pym1	94	89.005	ENSPTIG00000017380	PYM1	94	89.005	Panthera_tigris_altaica
MGP_SPRETEiJ_G0016778	Pym1	94	91.623	ENSPTRG00000005067	PYM1	94	91.623	Pan_troglodytes
MGP_SPRETEiJ_G0016778	Pym1	94	90.576	ENSPANG00000009562	PYM1	94	90.576	Papio_anubis
MGP_SPRETEiJ_G0016778	Pym1	100	61.321	ENSPKIG00000006301	pym1	93	61.421	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0016778	Pym1	94	61.692	ENSPSIG00000003043	PYM1	94	61.692	Pelodiscus_sinensis
MGP_SPRETEiJ_G0016778	Pym1	100	58.852	ENSPMGG00000023161	pym1	92	59.794	Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0016778	Pym1	94	92.632	ENSPEMG00000009372	Pym1	94	92.632	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0016778	Pym1	92	76.344	ENSPCIG00000024658	PYM1	90	76.344	Phascolarctos_cinereus
MGP_SPRETEiJ_G0016778	Pym1	99	59.624	ENSPFOG00000008193	pym1	93	59.701	Poecilia_formosa
MGP_SPRETEiJ_G0016778	Pym1	99	59.624	ENSPLAG00000009228	pym1	93	59.701	Poecilia_latipinna
MGP_SPRETEiJ_G0016778	Pym1	99	59.624	ENSPMEG00000001505	pym1	93	59.701	Poecilia_mexicana
MGP_SPRETEiJ_G0016778	Pym1	94	88.542	ENSPPYG00000004635	PYM1	93	90.055	Pongo_abelii
MGP_SPRETEiJ_G0016778	Pym1	94	90.052	ENSPCOG00000019706	PYM1	94	90.052	Propithecus_coquereli
MGP_SPRETEiJ_G0016778	Pym1	94	88.542	ENSPVAG00000011437	PYM1	92	90.556	Pteropus_vampyrus
MGP_SPRETEiJ_G0016778	Pym1	93	57.286	ENSPNYG00000012871	pym1	93	58.794	Pundamilia_nyererei
MGP_SPRETEiJ_G0016778	Pym1	99	58.257	ENSPNAG00000018833	pym1	93	59.709	Pygocentrus_nattereri
MGP_SPRETEiJ_G0016778	Pym1	94	71.204	ENSRNOG00000049415	AABR07055413.1	94	71.204	Rattus_norvegicus
MGP_SPRETEiJ_G0016778	Pym1	94	92.147	ENSRNOG00000058130	Pym1	94	92.147	Rattus_norvegicus
MGP_SPRETEiJ_G0016778	Pym1	94	86.387	ENSRBIG00000033362	PYM1	94	86.387	Rhinopithecus_bieti
MGP_SPRETEiJ_G0016778	Pym1	94	91.099	ENSRROG00000043620	PYM1	94	91.099	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0016778	Pym1	94	91.099	ENSSBOG00000029393	PYM1	94	91.099	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0016778	Pym1	93	79.365	ENSSHAG00000008280	PYM1	93	79.365	Sarcophilus_harrisii
MGP_SPRETEiJ_G0016778	Pym1	93	63.021	ENSSFOG00015021475	pym1	92	63.021	Scleropages_formosus
MGP_SPRETEiJ_G0016778	Pym1	99	57.820	ENSSMAG00000020912	pym1	93	58.794	Scophthalmus_maximus
MGP_SPRETEiJ_G0016778	Pym1	99	54.884	ENSSDUG00000001807	pym1	94	56.039	Seriola_dumerili
MGP_SPRETEiJ_G0016778	Pym1	99	58.537	ENSSLDG00000013730	pym1	94	59.391	Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0016778	Pym1	89	88.333	ENSSARG00000009569	PYM1	94	88.333	Sorex_araneus
MGP_SPRETEiJ_G0016778	Pym1	92	61.692	ENSSPUG00000015059	PYM1	94	62.755	Sphenodon_punctatus
MGP_SPRETEiJ_G0016778	Pym1	99	56.542	ENSSPAG00000020100	pym1	93	58.128	Stegastes_partitus
MGP_SPRETEiJ_G0016778	Pym1	94	89.529	ENSSSCG00000040825	PYM1	94	89.529	Sus_scrofa
MGP_SPRETEiJ_G0016778	Pym1	99	54.808	ENSTRUG00000021367	pym1	93	55.612	Takifugu_rubripes
MGP_SPRETEiJ_G0016778	Pym1	99	55.825	ENSTNIG00000012534	pym1	92	57.812	Tetraodon_nigroviridis
MGP_SPRETEiJ_G0016778	Pym1	89	84.444	ENSTBEG00000004208	PYM1	94	84.444	Tupaia_belangeri
MGP_SPRETEiJ_G0016778	Pym1	94	87.500	ENSTTRG00000014971	PYM1	94	88.043	Tursiops_truncatus
MGP_SPRETEiJ_G0016778	Pym1	94	90.576	ENSUAMG00000014521	PYM1	94	90.576	Ursus_americanus
MGP_SPRETEiJ_G0016778	Pym1	94	88.542	ENSUMAG00000016241	PYM1	84	88.649	Ursus_maritimus
MGP_SPRETEiJ_G0016778	Pym1	94	90.576	ENSVVUG00000022749	PYM1	94	90.576	Vulpes_vulpes
MGP_SPRETEiJ_G0016778	Pym1	94	60.000	ENSXETG00000021850	pym1	94	60.302	Xenopus_tropicalis
MGP_SPRETEiJ_G0016778	Pym1	99	57.820	ENSXMAG00000011649	pym1	93	57.789	Xiphophorus_maculatus