EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0016846 (Gene tree)
Gene ID: -
Gene Symbol: Patz1
Alias: 8430401L15Rik|MAZR|POZ-AT hook-zinc finger protein|Zfp278
Full Name: POZ (BTB) and AT hook containing zinc finger 1
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Plus strand
Length: 21029 bases
Position: chr11:170078-191106
Accession: 1891832
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0026621	zf-C2H2	PF00096.26	4e-26	1	5
MGP_SPRETEiJ_P0026621	zf-C2H2	PF00096.26	4e-26	2	5
MGP_SPRETEiJ_P0026621	zf-C2H2	PF00096.26	4e-26	3	5
MGP_SPRETEiJ_P0026621	zf-C2H2	PF00096.26	4e-26	4	5
MGP_SPRETEiJ_P0026621	zf-C2H2	PF00096.26	4e-26	5	5
MGP_SPRETEiJ_P0026622	zf-C2H2	PF00096.26	5.1e-20	1	4
MGP_SPRETEiJ_P0026622	zf-C2H2	PF00096.26	5.1e-20	2	4
MGP_SPRETEiJ_P0026622	zf-C2H2	PF00096.26	5.1e-20	3	4
MGP_SPRETEiJ_P0026622	zf-C2H2	PF00096.26	5.1e-20	4	4
MGP_SPRETEiJ_P0026623	zf-C2H2	PF00096.26	1.9e-16	1	3
MGP_SPRETEiJ_P0026623	zf-C2H2	PF00096.26	1.9e-16	2	3
MGP_SPRETEiJ_P0026623	zf-C2H2	PF00096.26	1.9e-16	3	3
MGP_SPRETEiJ_P0026620	zf-C2H2	PF00096.26	2.2e-15	1	3
MGP_SPRETEiJ_P0026620	zf-C2H2	PF00096.26	2.2e-15	2	3
MGP_SPRETEiJ_P0026620	zf-C2H2	PF00096.26	2.2e-15	3	3
MGP_SPRETEiJ_P0026621	zf-met	PF12874.7	3.7e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0026625	-	1249	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0026624	-	1959	-	MGP_SPRETEiJ_P0026624	583 (aa)	-	-
MGP_SPRETEiJ_T0026627	-	652	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0026626	-	456	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0026621	-	3698	-	MGP_SPRETEiJ_P0026621	687 (aa)	-	UPI00001C49DE
MGP_SPRETEiJ_T0026619	-	1904	-	MGP_SPRETEiJ_P0026619	102 (aa)	-	UPI00001B63B0
MGP_SPRETEiJ_T0026623	-	3173	-	MGP_SPRETEiJ_P0026623	537 (aa)	-	UPI000049C712
MGP_SPRETEiJ_T0026622	-	3118	-	MGP_SPRETEiJ_P0026622	641 (aa)	-	UPI0000021919
MGP_SPRETEiJ_T0026616	-	798	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0026617	-	1853	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0026628	-	482	-	MGP_SPRETEiJ_P0026628	70 (aa)	-	UPI000049C713
MGP_SPRETEiJ_T0026618	-	844	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0026620	-	2903	-	MGP_SPRETEiJ_P0026620	537 (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0016846's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0016846's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_SPRETEiJ_G0016846	Patz1	71	31.604	MGP_SPRETEiJ_G0019544	Zfp759	86	31.801
MGP_SPRETEiJ_G0016846	Patz1	53	33.761	MGP_SPRETEiJ_G0030525	-	82	34.483
MGP_SPRETEiJ_G0016846	Patz1	59	31.624	MGP_SPRETEiJ_G0030526	-	86	34.483
MGP_SPRETEiJ_G0016846	Patz1	97	35.570	MGP_SPRETEiJ_G0025835	Mynn	91	30.272

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0016846	Patz1	100	98.981	ENSG00000100105	PATZ1	100	98.981	Homo_sapiens
MGP_SPRETEiJ_G0016846	Patz1	99	60.803	ENSAPOG00000018447	patz1	100	59.520	Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0016846	Patz1	100	98.690	ENSAMEG00000007074	PATZ1	100	98.690	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0016846	Patz1	100	60.425	ENSACIG00000016779	patz1	100	60.155	Amphilophus_citrinellus
MGP_SPRETEiJ_G0016846	Patz1	100	57.983	ENSAPEG00000013354	patz1	100	57.983	Amphiprion_percula
MGP_SPRETEiJ_G0016846	Patz1	100	63.137	ENSATEG00000011260	patz1	100	62.745	Anabas_testudineus
MGP_SPRETEiJ_G0016846	Patz1	85	90.925	ENSAPLG00000003934	PATZ1	99	90.753	Anas_platyrhynchos
MGP_SPRETEiJ_G0016846	Patz1	100	98.981	ENSANAG00000029603	PATZ1	100	98.981	Aotus_nancymaae
MGP_SPRETEiJ_G0016846	Patz1	97	62.424	ENSAMXG00000002273	patz1	98	60.862	Astyanax_mexicanus
MGP_SPRETEiJ_G0016846	Patz1	100	98.752	ENSBTAG00000005478	PATZ1	100	98.752	Bos_taurus
MGP_SPRETEiJ_G0016846	Patz1	100	98.981	ENSCJAG00000010978	PATZ1	100	98.981	Callithrix_jacchus
MGP_SPRETEiJ_G0016846	Patz1	100	98.908	ENSCAFG00000013087	PATZ1	100	98.836	Canis_familiaris
MGP_SPRETEiJ_G0016846	Patz1	100	98.284	ENSCHIG00000020203	PATZ1	100	98.284	Capra_hircus
MGP_SPRETEiJ_G0016846	Patz1	100	98.908	ENSTSYG00000033183	PATZ1	100	98.908	Carlito_syrichta
MGP_SPRETEiJ_G0016846	Patz1	100	98.981	ENSCCAG00000028772	PATZ1	100	98.981	Cebus_capucinus
MGP_SPRETEiJ_G0016846	Patz1	100	98.981	ENSCATG00000006101	PATZ1	100	98.981	Cercocebus_atys
MGP_SPRETEiJ_G0016846	Patz1	100	88.841	ENSCPBG00000011277	PATZ1	100	88.551	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0016846	Patz1	100	98.981	ENSCANG00000024972	PATZ1	100	98.981	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0016846	Patz1	100	97.380	ENSCGRG00001004071	Patz1	100	97.380	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0016846	Patz1	93	98.134	ENSCGRG00000004814	Patz1	100	98.134	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0016846	Patz1	100	55.168	ENSCSEG00000001385	patz1	100	55.182	Cynoglossus_semilaevis
MGP_SPRETEiJ_G0016846	Patz1	100	58.997	ENSCVAG00000007684	patz1	100	59.380	Cyprinodon_variegatus
MGP_SPRETEiJ_G0016846	Patz1	97	60.679	ENSDARG00000076584	patz1	98	58.815	Danio_rerio
MGP_SPRETEiJ_G0016846	Patz1	97	95.420	ENSDNOG00000003183	PATZ1	100	98.061	Dasypus_novemcinctus
MGP_SPRETEiJ_G0016846	Patz1	100	99.220	ENSDORG00000023834	Patz1	100	99.220	Dipodomys_ordii
MGP_SPRETEiJ_G0016846	Patz1	100	98.752	ENSECAG00000025030	PATZ1	100	98.752	Equus_caballus
MGP_SPRETEiJ_G0016846	Patz1	99	61.509	ENSELUG00000002333	patz1	100	57.977	Esox_lucius
MGP_SPRETEiJ_G0016846	Patz1	100	98.908	ENSFCAG00000030253	PATZ1	100	98.908	Felis_catus
MGP_SPRETEiJ_G0016846	Patz1	86	91.356	ENSFALG00000007450	PATZ1	99	91.312	Ficedula_albicollis
MGP_SPRETEiJ_G0016846	Patz1	96	96.881	ENSFDAG00000005614	PATZ1	100	96.881	Fukomys_damarensis
MGP_SPRETEiJ_G0016846	Patz1	100	57.918	ENSFHEG00000014755	patz1	100	57.625	Fundulus_heteroclitus
MGP_SPRETEiJ_G0016846	Patz1	98	54.979	ENSGMOG00000001062	patz1	98	54.709	Gadus_morhua
MGP_SPRETEiJ_G0016846	Patz1	100	88.201	ENSGALG00000006934	PATZ1	100	88.201	Gallus_gallus
MGP_SPRETEiJ_G0016846	Patz1	100	59.029	ENSGAFG00000010053	patz1	100	58.003	Gambusia_affinis
MGP_SPRETEiJ_G0016846	Patz1	85	91.595	ENSGAGG00000003214	PATZ1	100	91.424	Gopherus_agassizii
MGP_SPRETEiJ_G0016846	Patz1	100	99.127	ENSGGOG00000017171	PATZ1	100	99.127	Gorilla_gorilla
MGP_SPRETEiJ_G0016846	Patz1	98	62.648	ENSHCOG00000017644	patz1	98	61.191	Hippocampus_comes
MGP_SPRETEiJ_G0016846	Patz1	97	60.489	ENSIPUG00000017653	patz1	97	53.890	Ictalurus_punctatus
MGP_SPRETEiJ_G0016846	Patz1	100	98.690	ENSSTOG00000020707	PATZ1	100	98.690	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0016846	Patz1	100	97.533	ENSJJAG00000015259	Patz1	100	97.533	Jaculus_jaculus
MGP_SPRETEiJ_G0016846	Patz1	100	57.775	ENSKMAG00000008157	patz1	100	57.872	Kryptolebias_marmoratus
MGP_SPRETEiJ_G0016846	Patz1	100	98.108	ENSLAFG00000002317	PATZ1	100	98.108	Loxodonta_africana
MGP_SPRETEiJ_G0016846	Patz1	100	98.836	ENSMFAG00000040968	PATZ1	100	98.836	Macaca_fascicularis
MGP_SPRETEiJ_G0016846	Patz1	100	98.836	ENSMNEG00000037588	PATZ1	100	98.836	Macaca_nemestrina
MGP_SPRETEiJ_G0016846	Patz1	100	98.981	ENSMLEG00000030938	PATZ1	100	98.981	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0016846	Patz1	100	57.625	ENSMAMG00000023652	patz1	100	57.918	Mastacembelus_armatus
MGP_SPRETEiJ_G0016846	Patz1	85	87.350	ENSMGAG00000008439	PATZ1	100	87.179	Meleagris_gallopavo
MGP_SPRETEiJ_G0016846	Patz1	100	99.127	ENSMAUG00000004129	Patz1	100	99.127	Mesocricetus_auratus
MGP_SPRETEiJ_G0016846	Patz1	100	98.752	ENSMICG00000005430	PATZ1	100	98.752	Microcebus_murinus
MGP_SPRETEiJ_G0016846	Patz1	100	98.981	ENSMOCG00000014488	Patz1	100	98.981	Microtus_ochrogaster
MGP_SPRETEiJ_G0016846	Patz1	99	55.664	ENSMMOG00000021679	patz1	100	49.168	Mola_mola
MGP_SPRETEiJ_G0016846	Patz1	100	57.001	ENSMALG00000021172	patz1	100	57.001	Monopterus_albus
MGP_SPRETEiJ_G0016846	Patz1	100	100.000	MGP_CAROLIEiJ_G0016007	Patz1	100	100.000	Mus_caroli
MGP_SPRETEiJ_G0016846	Patz1	100	100.000	ENSMUSG00000020453	Patz1	100	100.000	Mus_musculus
MGP_SPRETEiJ_G0016846	Patz1	100	100.000	MGP_PahariEiJ_G0016884	Patz1	100	100.000	Mus_pahari
MGP_SPRETEiJ_G0016846	Patz1	100	98.596	ENSMLUG00000009942	PATZ1	100	98.596	Myotis_lucifugus
MGP_SPRETEiJ_G0016846	Patz1	100	99.418	ENSNGAG00000010268	Patz1	100	99.418	Nannospalax_galili
MGP_SPRETEiJ_G0016846	Patz1	100	60.232	ENSNBRG00000016032	patz1	100	59.961	Neolamprologus_brichardi
MGP_SPRETEiJ_G0016846	Patz1	68	93.548	ENSMEUG00000016293	PATZ1	100	93.548	Notamacropus_eugenii
MGP_SPRETEiJ_G0016846	Patz1	100	97.972	ENSODEG00000003589	PATZ1	100	97.972	Octodon_degus
MGP_SPRETEiJ_G0016846	Patz1	100	58.918	ENSONIG00000004248	patz1	100	58.858	Oreochromis_niloticus
MGP_SPRETEiJ_G0016846	Patz1	100	92.743	ENSOANG00000014654	PATZ1	100	93.469	Ornithorhynchus_anatinus
MGP_SPRETEiJ_G0016846	Patz1	100	58.931	ENSORLG00020010937	patz1	100	58.931	Oryzias_latipes_hni
MGP_SPRETEiJ_G0016846	Patz1	100	58.297	ENSORLG00015007396	patz1	100	58.297	Oryzias_latipes_hsok
MGP_SPRETEiJ_G0016846	Patz1	99	60.792	ENSOMEG00000006636	patz1	100	57.755	Oryzias_melastigma
MGP_SPRETEiJ_G0016846	Patz1	100	98.544	ENSOGAG00000027905	PATZ1	100	98.544	Otolemur_garnettii
MGP_SPRETEiJ_G0016846	Patz1	100	99.127	ENSPPAG00000033227	PATZ1	100	99.127	Pan_paniscus
MGP_SPRETEiJ_G0016846	Patz1	100	98.908	ENSPPRG00000001573	PATZ1	100	98.908	Panthera_pardus
MGP_SPRETEiJ_G0016846	Patz1	86	98.651	ENSPTIG00000007937	PATZ1	91	98.651	Panthera_tigris_altaica
MGP_SPRETEiJ_G0016846	Patz1	100	99.127	ENSPTRG00000014268	PATZ1	100	99.127	Pan_troglodytes
MGP_SPRETEiJ_G0016846	Patz1	100	98.981	ENSPANG00000006821	PATZ1	100	98.981	Papio_anubis
MGP_SPRETEiJ_G0016846	Patz1	100	62.127	ENSPKIG00000019584	patz1	100	61.381	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0016846	Patz1	71	79.275	ENSPSIG00000016553	-	91	82.809	Pelodiscus_sinensis
MGP_SPRETEiJ_G0016846	Patz1	58	95.455	ENSPSIG00000011562	-	100	96.000	Pelodiscus_sinensis
MGP_SPRETEiJ_G0016846	Patz1	100	57.303	ENSPMGG00000010196	patz1	100	57.584	Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0016846	Patz1	100	99.064	ENSPEMG00000005321	Patz1	100	99.064	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0016846	Patz1	100	57.771	ENSPLAG00000010425	patz1	100	57.771	Poecilia_latipinna
MGP_SPRETEiJ_G0016846	Patz1	99	59.029	ENSPMEG00000000255	patz1	100	57.856	Poecilia_mexicana
MGP_SPRETEiJ_G0016846	Patz1	100	57.320	ENSPREG00000002440	patz1	100	57.320	Poecilia_reticulata
MGP_SPRETEiJ_G0016846	Patz1	100	98.836	ENSPPYG00000011732	PATZ1	100	98.836	Pongo_abelii
MGP_SPRETEiJ_G0016846	Patz1	100	98.596	ENSPCOG00000019729	PATZ1	100	98.596	Propithecus_coquereli
MGP_SPRETEiJ_G0016846	Patz1	100	98.690	ENSPVAG00000001749	PATZ1	100	98.690	Pteropus_vampyrus
MGP_SPRETEiJ_G0016846	Patz1	100	59.384	ENSPNYG00000013542	patz1	100	59.187	Pundamilia_nyererei
MGP_SPRETEiJ_G0016846	Patz1	84	60.454	ENSPNAG00000017222	patz1	99	59.486	Pygocentrus_nattereri
MGP_SPRETEiJ_G0016846	Patz1	100	98.981	ENSRBIG00000044231	PATZ1	100	98.981	Rhinopithecus_bieti
MGP_SPRETEiJ_G0016846	Patz1	100	98.981	ENSRROG00000037155	PATZ1	100	98.981	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0016846	Patz1	100	98.981	ENSSBOG00000003894	PATZ1	100	98.981	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0016846	Patz1	79	88.462	ENSSFOG00015013244	patz1	78	88.462	Scleropages_formosus
MGP_SPRETEiJ_G0016846	Patz1	100	86.629	ENSSPUG00000015298	PATZ1	100	86.344	Sphenodon_punctatus
MGP_SPRETEiJ_G0016846	Patz1	85	98.110	ENSSSCG00000010027	PATZ1	100	98.134	Sus_scrofa
MGP_SPRETEiJ_G0016846	Patz1	99	59.806	ENSTRUG00000015366	patz1	100	58.402	Takifugu_rubripes
MGP_SPRETEiJ_G0016846	Patz1	100	98.690	ENSTTRG00000010279	PATZ1	100	98.690	Tursiops_truncatus
MGP_SPRETEiJ_G0016846	Patz1	100	98.908	ENSUAMG00000015014	PATZ1	100	98.908	Ursus_americanus
MGP_SPRETEiJ_G0016846	Patz1	100	72.754	ENSXETG00000004190	patz1	100	72.029	Xenopus_tropicalis
MGP_SPRETEiJ_G0016846	Patz1	100	58.150	ENSXMAG00000015531	patz1	100	58.150	Xiphophorus_maculatus