EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0017035 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Minus strand
Length: 313516 bases
Position: chr11:31109143-31422658
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0027474	IBN_N	PF03810.19	9.2e-12	1	1
MGP_SPRETEiJ_P0027473	IBN_N	PF03810.19	2.1e-11	1	1
MGP_SPRETEiJ_P0027467	IBN_N	PF03810.19	3.8e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0027473	-	3934	-	MGP_SPRETEiJ_P0027473	516 (aa)	-	-
MGP_SPRETEiJ_T0027472	-	635	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0027471	-	3215	-	MGP_SPRETEiJ_P0027471	530 (aa)	-	-
MGP_SPRETEiJ_T0027468	-	1623	-	MGP_SPRETEiJ_P0027468	540 (aa)	-	-
MGP_SPRETEiJ_T0027474	-	675	-	MGP_SPRETEiJ_P0027474	210 (aa)	-	-
MGP_SPRETEiJ_T0027467	-	4863	-	MGP_SPRETEiJ_P0027467	1042 (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0017035's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0017035's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0017035	-	99	92.952	ENSG00000204764	RANBP17	100	94.737	Homo_sapiens
MGP_SPRETEiJ_G0017035	-	99	68.371	ENSG00000130227	XPO7	97	63.784	Homo_sapiens
MGP_SPRETEiJ_G0017035	-	98	93.269	ENSAMEG00000003955	RANBP17	90	93.090	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0017035	-	75	81.529	ENSACAG00000029341	-	96	82.166	Anolis_carolinensis
MGP_SPRETEiJ_G0017035	-	99	91.810	ENSCJAG00000019368	RANBP17	91	91.810	Callithrix_jacchus
MGP_SPRETEiJ_G0017035	-	99	93.905	ENSCAFG00000016935	RANBP17	91	93.905	Canis_familiaris
MGP_SPRETEiJ_G0017035	-	99	68.511	ENSCAFG00000009928	XPO7	54	67.293	Canis_familiaris
MGP_SPRETEiJ_G0017035	-	100	92.857	ENSCAFG00020005518	RANBP17	51	93.143	Canis_lupus_dingo
MGP_SPRETEiJ_G0017035	-	99	91.810	ENSCHIG00000007336	-	91	91.810	Capra_hircus
MGP_SPRETEiJ_G0017035	-	99	91.587	ENSTSYG00000029782	RANBP17	90	91.939	Carlito_syrichta
MGP_SPRETEiJ_G0017035	-	99	91.238	ENSCPOG00000005628	RANBP17	100	89.524	Cavia_porcellus
MGP_SPRETEiJ_G0017035	-	99	93.143	ENSCATG00000011884	RANBP17	92	92.030	Cercocebus_atys
MGP_SPRETEiJ_G0017035	-	99	91.810	ENSCLAG00000013185	RANBP17	100	90.000	Chinchilla_lanigera
MGP_SPRETEiJ_G0017035	-	99	53.030	ENSCSAVG00000009812	-	54	47.532	Ciona_savignyi
MGP_SPRETEiJ_G0017035	-	99	67.542	ENSCANG00000036866	XPO7	50	67.542	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0017035	-	99	91.810	ENSCANG00000039832	RANBP17	92	91.461	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0017035	-	99	96.381	ENSCGRG00001015450	Ranbp17	99	94.118	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0017035	-	99	87.354	ENSCGRG00000005277	-	99	87.354	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0017035	-	100	91.905	ENSDORG00000001411	Ranbp17	100	92.344	Dipodomys_ordii
MGP_SPRETEiJ_G0017035	-	99	92.571	ENSGGOG00000010374	RANBP17	92	91.651	Gorilla_gorilla
MGP_SPRETEiJ_G0017035	-	100	90.952	ENSHGLG00000014605	RANBP17	100	90.952	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0017035	-	100	90.952	ENSHGLG00100011629	RANBP17	100	90.952	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0017035	-	100	92.857	ENSSTOG00000014700	RANBP17	100	92.857	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0017035	-	98	68.642	ENSJJAG00000019391	Xpo7	50	68.642	Jaculus_jaculus
MGP_SPRETEiJ_G0017035	-	99	68.371	ENSMFAG00000030886	XPO7	51	68.371	Macaca_fascicularis
MGP_SPRETEiJ_G0017035	-	99	92.571	ENSMFAG00000034347	RANBP17	92	91.461	Macaca_fascicularis
MGP_SPRETEiJ_G0017035	-	100	92.264	ENSMMUG00000015840	RANBP17	92	92.264	Macaca_mulatta
MGP_SPRETEiJ_G0017035	-	99	92.571	ENSMNEG00000045556	RANBP17	92	91.461	Macaca_nemestrina
MGP_SPRETEiJ_G0017035	-	99	68.371	ENSMAMG00000012156	xpo7	50	68.924	Mastacembelus_armatus
MGP_SPRETEiJ_G0017035	-	99	68.893	ENSMGAG00000001426	XPO7	50	68.893	Meleagris_gallopavo
MGP_SPRETEiJ_G0017035	-	99	96.381	ENSMAUG00000017990	Ranbp17	100	94.762	Mesocricetus_auratus
MGP_SPRETEiJ_G0017035	-	99	94.095	ENSMICG00000027710	RANBP17	91	94.015	Microcebus_murinus
MGP_SPRETEiJ_G0017035	-	100	94.762	ENSMOCG00000007105	Ranbp17	100	94.762	Microtus_ochrogaster
MGP_SPRETEiJ_G0017035	-	100	98.571	MGP_CAROLIEiJ_G0016194	Ranbp17	100	98.571	Mus_caroli
MGP_SPRETEiJ_G0017035	-	100	99.419	ENSMUSG00000040594	Ranbp17	100	99.419	Mus_musculus
MGP_SPRETEiJ_G0017035	-	99	68.182	ENSMUSG00000022100	Xpo7	50	68.182	Mus_musculus
MGP_SPRETEiJ_G0017035	-	100	97.619	MGP_PahariEiJ_G0017330	Ranbp17	100	97.619	Mus_pahari
MGP_SPRETEiJ_G0017035	-	99	67.045	ENSMPUG00000019195	-	98	67.045	Mustela_putorius_furo
MGP_SPRETEiJ_G0017035	-	99	93.780	ENSNGAG00000014221	Ranbp17	100	93.333	Nannospalax_galili
MGP_SPRETEiJ_G0017035	-	99	92.952	ENSNLEG00000000281	RANBP17	91	92.381	Nomascus_leucogenys
MGP_SPRETEiJ_G0017035	-	100	90.952	ENSODEG00000004642	-	100	90.952	Octodon_degus
MGP_SPRETEiJ_G0017035	-	99	65.714	ENSOANG00000013187	-	88	64.894	Ornithorhynchus_anatinus
MGP_SPRETEiJ_G0017035	-	98	68.774	ENSORLG00015006681	xpo7	51	68.642	Oryzias_latipes_hsok
MGP_SPRETEiJ_G0017035	-	99	92.571	ENSPPAG00000041600	RANBP17	91	92.000	Pan_paniscus
MGP_SPRETEiJ_G0017035	-	99	92.762	ENSPTRG00000028506	RANBP17	92	91.841	Pan_troglodytes
MGP_SPRETEiJ_G0017035	-	99	93.143	ENSPANG00000002592	RANBP17	91	92.395	Papio_anubis
MGP_SPRETEiJ_G0017035	-	99	96.571	ENSPEMG00000013086	Ranbp17	100	95.238	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0017035	-	99	90.323	ENSPCAG00000005027	RANBP17	50	90.323	Procavia_capensis
MGP_SPRETEiJ_G0017035	-	99	93.301	ENSPCOG00000007993	-	99	87.500	Propithecus_coquereli
MGP_SPRETEiJ_G0017035	-	99	92.571	ENSRBIG00000040500	RANBP17	92	91.461	Rhinopithecus_bieti
MGP_SPRETEiJ_G0017035	-	99	92.250	ENSRROG00000045173	RANBP17	90	91.778	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0017035	-	99	86.124	ENSSHAG00000000333	-	100	86.558	Sarcophilus_harrisii
MGP_SPRETEiJ_G0017035	-	98	88.247	ENSSPUG00000017286	RANBP17	87	88.247	Sphenodon_punctatus
MGP_SPRETEiJ_G0017035	-	95	68.379	ENSSPAG00000011560	xpo7	50	68.379	Stegastes_partitus
MGP_SPRETEiJ_G0017035	-	99	94.095	ENSSSCG00000017000	RANBP17	50	94.095	Sus_scrofa
MGP_SPRETEiJ_G0017035	-	99	64.762	ENSTRUG00000017316	-	83	67.123	Takifugu_rubripes
MGP_SPRETEiJ_G0017035	-	99	68.242	ENSTNIG00000004671	xpo7	57	68.242	Tetraodon_nigroviridis
MGP_SPRETEiJ_G0017035	-	99	68.511	ENSUAMG00000003008	XPO7	92	68.442	Ursus_americanus
MGP_SPRETEiJ_G0017035	-	98	93.846	ENSUMAG00000024660	RANBP17	51	93.308	Ursus_maritimus
MGP_SPRETEiJ_G0017035	-	99	68.511	ENSVVUG00000007346	XPO7	50	68.061	Vulpes_vulpes