EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
MGP_SPRETEiJ_G0017122 (Gene tree)
Gene ID
-
Gene Symbol
Cnot6
Alias
A230103N10Rik
Full Name
CCR4-NOT transcription complex%2C subunit 6
Gene Type
protein_coding
Species
Mus_spretus
Status
putative
Strand
Minus strand
Length
42354 bases
Position
chr11:48235505-48277858
Accession
2144529
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_SPRETEiJ_P0027756Exo_endo_phosPF03372.237.1e-2211
MGP_SPRETEiJ_P0027754Exo_endo_phosPF03372.237.4e-2211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_SPRETEiJ_T0027756-2494-MGP_SPRETEiJ_P0027756552 (aa)--
MGP_SPRETEiJ_T0027757-605--- (aa)--
MGP_SPRETEiJ_T0027754-5733-MGP_SPRETEiJ_P0027754557 (aa)--
MGP_SPRETEiJ_T0027755-2237--- (aa)--
MGP_SPRETEiJ_T0027758-832--- (aa)--
Gene Model
Click here to download MGP_SPRETEiJ_G0017122's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0017122's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_SPRETEiJ_G0017122Cnot610077.174MGP_SPRETEiJ_G0028426Cnot6l10077.174
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
MGP_SPRETEiJ_G0017122Cnot610095.871ENSG00000113300CNOT6100100.000Homo_sapiens
MGP_SPRETEiJ_G0017122Cnot610086.225ENSAPOG00000009994cnot6b10086.225Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0017122Cnot610096.780ENSAMEG00000000949CNOT69996.780Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0017122Cnot610085.740ENSACIG00000016566cnot6b10085.740Amphilophus_citrinellus
MGP_SPRETEiJ_G0017122Cnot610086.225ENSAOCG00000006893cnot6b10086.225Amphiprion_ocellaris
MGP_SPRETEiJ_G0017122Cnot610086.225ENSAPEG00000016949cnot6b10086.225Amphiprion_percula
MGP_SPRETEiJ_G0017122Cnot610084.258ENSATEG00000007862cnot6b10084.258Anabas_testudineus
MGP_SPRETEiJ_G0017122Cnot610094.973ENSAPLG00000012715CNOT69994.973Anas_platyrhynchos
MGP_SPRETEiJ_G0017122Cnot610092.639ENSACAG00000016548CNOT610092.639Anolis_carolinensis
MGP_SPRETEiJ_G0017122Cnot610096.230ENSANAG00000030436CNOT69696.230Aotus_nancymaae
MGP_SPRETEiJ_G0017122Cnot610084.258ENSACLG00000008279cnot6b10085.152Astatotilapia_calliptera
MGP_SPRETEiJ_G0017122Cnot610084.767ENSAMXG00000034694cnot6b10084.767Astyanax_mexicanus
MGP_SPRETEiJ_G0017122Cnot610086.022ENSAMXG00000019140cnot6a10086.022Astyanax_mexicanus
MGP_SPRETEiJ_G0017122Cnot610096.409ENSBTAG00000017362CNOT610096.409Bos_taurus
MGP_SPRETEiJ_G0017122Cnot610096.050ENSCJAG00000009795CNOT610096.050Callithrix_jacchus
MGP_SPRETEiJ_G0017122Cnot610096.768ENSCAFG00000000464CNOT610096.768Canis_familiaris
MGP_SPRETEiJ_G0017122Cnot610096.768ENSCAFG00020002441CNOT610096.768Canis_lupus_dingo
MGP_SPRETEiJ_G0017122Cnot610096.230ENSCHIG00000019100CNOT610096.230Capra_hircus
MGP_SPRETEiJ_G0017122Cnot610094.614ENSTSYG00000003982CNOT610094.614Carlito_syrichta
MGP_SPRETEiJ_G0017122Cnot610092.280ENSCPOG00000035657CNOT610092.280Cavia_porcellus
MGP_SPRETEiJ_G0017122Cnot610092.101ENSCCAG00000033670CNOT610092.101Cebus_capucinus
MGP_SPRETEiJ_G0017122Cnot610095.871ENSCATG00000042014CNOT610095.871Cercocebus_atys
MGP_SPRETEiJ_G0017122Cnot610095.871ENSCLAG00000010489CNOT610095.871Chinchilla_lanigera
MGP_SPRETEiJ_G0017122Cnot610095.871ENSCSAG00000008165CNOT610095.871Chlorocebus_sabaeus
MGP_SPRETEiJ_G0017122Cnot610095.332ENSCHOG00000009680CNOT610095.332Choloepus_hoffmanni
MGP_SPRETEiJ_G0017122Cnot610094.255ENSCPBG00000008908CNOT610094.255Chrysemys_picta_bellii
MGP_SPRETEiJ_G0017122Cnot610096.050ENSCANG00000026756CNOT610096.050Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0017122Cnot610099.819ENSCGRG00001011452Cnot610099.819Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0017122Cnot610097.127ENSCGRG00000010407Cnot610097.127Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0017122Cnot610085.331ENSCSEG00000010939cnot6b10085.331Cynoglossus_semilaevis
MGP_SPRETEiJ_G0017122Cnot610084.946ENSCVAG00000010538cnot6b10084.946Cyprinodon_variegatus
MGP_SPRETEiJ_G0017122Cnot610083.154ENSDARG00000101072cnot6b10083.154Danio_rerio
MGP_SPRETEiJ_G0017122Cnot610085.484ENSDARG00000008255cnot6a10085.484Danio_rerio
MGP_SPRETEiJ_G0017122Cnot610096.230ENSDNOG00000041644CNOT610096.230Dasypus_novemcinctus
MGP_SPRETEiJ_G0017122Cnot610086.918ENSDORG00000001708Cnot610086.918Dipodomys_ordii
MGP_SPRETEiJ_G0017122Cnot610076.923ENSETEG00000006975CNOT610076.923Echinops_telfairi
MGP_SPRETEiJ_G0017122Cnot610096.230ENSEASG00005012794-10096.230Equus_asinus_asinus
MGP_SPRETEiJ_G0017122Cnot68992.698ENSEASG00005012957-9892.698Equus_asinus_asinus
MGP_SPRETEiJ_G0017122Cnot610091.304ENSECAG00000012704-9991.304Equus_caballus
MGP_SPRETEiJ_G0017122Cnot610096.948ENSECAG00000019325CNOT610096.948Equus_caballus
MGP_SPRETEiJ_G0017122Cnot610095.332ENSEEUG00000015382CNOT610095.332Erinaceus_europaeus
MGP_SPRETEiJ_G0017122Cnot610081.362ENSELUG00000024580cnot6a10081.362Esox_lucius
MGP_SPRETEiJ_G0017122Cnot610082.363ENSELUG00000015981cnot6b9982.363Esox_lucius
MGP_SPRETEiJ_G0017122Cnot610096.768ENSFCAG00000001881CNOT610096.768Felis_catus
MGP_SPRETEiJ_G0017122Cnot610095.153ENSFALG00000007699CNOT610095.153Ficedula_albicollis
MGP_SPRETEiJ_G0017122Cnot610095.512ENSFDAG00000001999CNOT610095.512Fukomys_damarensis
MGP_SPRETEiJ_G0017122Cnot66588.095ENSFHEG00000013756cnot6b9492.308Fundulus_heteroclitus
MGP_SPRETEiJ_G0017122Cnot69584.121ENSGMOG00000009767cnot6b9984.121Gadus_morhua
MGP_SPRETEiJ_G0017122Cnot610095.153ENSGALG00000034316CNOT610095.153Gallus_gallus
MGP_SPRETEiJ_G0017122Cnot610085.125ENSGAFG00000008525cnot6b10085.125Gambusia_affinis
MGP_SPRETEiJ_G0017122Cnot69582.420ENSGACG00000018046cnot6b9982.420Gasterosteus_aculeatus
MGP_SPRETEiJ_G0017122Cnot610078.456ENSGAGG00000012176CNOT610078.456Gopherus_agassizii
MGP_SPRETEiJ_G0017122Cnot610095.871ENSGGOG00000003675CNOT610095.871Gorilla_gorilla
MGP_SPRETEiJ_G0017122Cnot610084.436ENSHBUG00000002819cnot6b10085.331Haplochromis_burtoni
MGP_SPRETEiJ_G0017122Cnot610096.050ENSHGLG00000017756CNOT610096.050Heterocephalus_glaber_female
MGP_SPRETEiJ_G0017122Cnot610096.050ENSHGLG00100005747CNOT610096.050Heterocephalus_glaber_male
MGP_SPRETEiJ_G0017122Cnot610083.394ENSHCOG00000016176cnot6b10084.296Hippocampus_comes
MGP_SPRETEiJ_G0017122Cnot610084.229ENSIPUG00000017482cnot6b10084.229Ictalurus_punctatus
MGP_SPRETEiJ_G0017122Cnot610084.946ENSIPUG00000019831cnot6a10084.946Ictalurus_punctatus
MGP_SPRETEiJ_G0017122Cnot610096.409ENSSTOG00000002803CNOT610096.409Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0017122Cnot610096.050ENSJJAG00000012296Cnot610096.050Jaculus_jaculus
MGP_SPRETEiJ_G0017122Cnot610086.022ENSKMAG00000004640cnot6b10086.022Kryptolebias_marmoratus
MGP_SPRETEiJ_G0017122Cnot610083.363ENSLBEG00000027917cnot6b10084.258Labrus_bergylta
MGP_SPRETEiJ_G0017122Cnot610089.068ENSLOCG00000010102cnot6b9989.068Lepisosteus_oculatus
MGP_SPRETEiJ_G0017122Cnot610096.589ENSLAFG00000016742CNOT610096.589Loxodonta_africana
MGP_SPRETEiJ_G0017122Cnot610095.871ENSMFAG00000030867CNOT610095.871Macaca_fascicularis
MGP_SPRETEiJ_G0017122Cnot610095.871ENSMMUG00000018690CNOT610095.871Macaca_mulatta
MGP_SPRETEiJ_G0017122Cnot610095.871ENSMNEG00000038565CNOT610095.871Macaca_nemestrina
MGP_SPRETEiJ_G0017122Cnot610095.871ENSMLEG00000010555CNOT610095.871Mandrillus_leucophaeus
MGP_SPRETEiJ_G0017122Cnot610086.404ENSMAMG00000007515cnot6b10086.404Mastacembelus_armatus
MGP_SPRETEiJ_G0017122Cnot610084.258ENSMZEG00005012899cnot6b10085.152Maylandia_zebra
MGP_SPRETEiJ_G0017122Cnot610099.820ENSMAUG00000019798Cnot610099.820Mesocricetus_auratus
MGP_SPRETEiJ_G0017122Cnot610094.434ENSMICG00000013018-10094.434Microcebus_murinus
MGP_SPRETEiJ_G0017122Cnot69886.029ENSMICG00000028378-9986.029Microcebus_murinus
MGP_SPRETEiJ_G0017122Cnot610099.461ENSMOCG00000021662Cnot610099.461Microtus_ochrogaster
MGP_SPRETEiJ_G0017122Cnot610083.906ENSMMOG00000003227cnot6b10083.906Mola_mola
MGP_SPRETEiJ_G0017122Cnot610094.973ENSMODG00000003979CNOT610094.973Monodelphis_domestica
MGP_SPRETEiJ_G0017122Cnot610086.047ENSMALG00000014251cnot6b10086.047Monopterus_albus
MGP_SPRETEiJ_G0017122Cnot610099.641MGP_CAROLIEiJ_G0016277Cnot610099.641Mus_caroli
MGP_SPRETEiJ_G0017122Cnot610099.641ENSMUSG00000020362Cnot610099.641Mus_musculus
MGP_SPRETEiJ_G0017122Cnot610099.641MGP_PahariEiJ_G0017413Cnot610099.641Mus_pahari
MGP_SPRETEiJ_G0017122Cnot610096.589ENSMPUG00000000587CNOT69696.589Mustela_putorius_furo
MGP_SPRETEiJ_G0017122Cnot610094.306ENSMLUG00000010257CNOT610094.306Myotis_lucifugus
MGP_SPRETEiJ_G0017122Cnot610098.743ENSNGAG00000008269Cnot610098.743Nannospalax_galili
MGP_SPRETEiJ_G0017122Cnot610084.436ENSNBRG00000010798cnot6b10085.331Neolamprologus_brichardi
MGP_SPRETEiJ_G0017122Cnot610095.652ENSNLEG00000002322CNOT610095.652Nomascus_leucogenys
MGP_SPRETEiJ_G0017122Cnot68196.262ENSMEUG00000000025CNOT68196.262Notamacropus_eugenii
MGP_SPRETEiJ_G0017122Cnot68894.511ENSOPRG00000008244-8894.511Ochotona_princeps
MGP_SPRETEiJ_G0017122Cnot610095.332ENSODEG00000007041CNOT610095.332Octodon_degus
MGP_SPRETEiJ_G0017122Cnot67584.397ENSONIG00000013027cnot6b9984.397Oreochromis_niloticus
MGP_SPRETEiJ_G0017122Cnot610094.075ENSOANG00000010226CNOT610094.075Ornithorhynchus_anatinus
MGP_SPRETEiJ_G0017122Cnot610095.170ENSOCUG00000011083CNOT610095.170Oryctolagus_cuniculus
MGP_SPRETEiJ_G0017122Cnot610084.794ENSORLG00000005059cnot6b10084.794Oryzias_latipes
MGP_SPRETEiJ_G0017122Cnot610084.794ENSORLG00020012784cnot6b10084.794Oryzias_latipes_hni
MGP_SPRETEiJ_G0017122Cnot69483.939ENSORLG00015022658cnot6b9883.939Oryzias_latipes_hsok
MGP_SPRETEiJ_G0017122Cnot610084.973ENSOMEG00000005295cnot6b10084.973Oryzias_melastigma
MGP_SPRETEiJ_G0017122Cnot69495.611ENSOGAG00000032470CNOT610095.611Otolemur_garnettii
MGP_SPRETEiJ_G0017122Cnot69795.941ENSOARG00000001003CNOT610095.941Ovis_aries
MGP_SPRETEiJ_G0017122Cnot610095.871ENSPPAG00000032253CNOT610095.871Pan_paniscus
MGP_SPRETEiJ_G0017122Cnot610096.589ENSPPRG00000011912CNOT610096.589Panthera_pardus
MGP_SPRETEiJ_G0017122Cnot610096.589ENSPTIG00000016794CNOT610096.589Panthera_tigris_altaica
MGP_SPRETEiJ_G0017122Cnot610095.871ENSPTRG00000017636CNOT610095.871Pan_troglodytes
MGP_SPRETEiJ_G0017122Cnot610095.871ENSPANG00000016191CNOT610095.871Papio_anubis
MGP_SPRETEiJ_G0017122Cnot610086.022ENSPKIG00000021368cnot6b10086.022Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0017122Cnot69894.669ENSPSIG00000017307CNOT610094.669Pelodiscus_sinensis
MGP_SPRETEiJ_G0017122Cnot610085.560ENSPMGG00000011238cnot6b10085.560Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0017122Cnot610098.384ENSPEMG00000000627Cnot610098.384Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0017122Cnot610094.794ENSPCIG00000020319CNOT69994.794Phascolarctos_cinereus
MGP_SPRETEiJ_G0017122Cnot610084.946ENSPFOG00000006291cnot6b10084.946Poecilia_formosa
MGP_SPRETEiJ_G0017122Cnot610081.555ENSPLAG00000008266cnot6b10081.555Poecilia_latipinna
MGP_SPRETEiJ_G0017122Cnot610085.125ENSPMEG00000009091cnot6b10085.125Poecilia_mexicana
MGP_SPRETEiJ_G0017122Cnot610084.448ENSPREG00000003713cnot6b10084.448Poecilia_reticulata
MGP_SPRETEiJ_G0017122Cnot610095.871ENSPPYG00000016137CNOT610095.871Pongo_abelii
MGP_SPRETEiJ_G0017122Cnot67196.241ENSPCAG00000005599-59100.000Procavia_capensis
MGP_SPRETEiJ_G0017122Cnot610090.844ENSPCOG00000017359CNOT610091.562Propithecus_coquereli
MGP_SPRETEiJ_G0017122Cnot610091.741ENSPVAG00000003069CNOT610091.741Pteropus_vampyrus
MGP_SPRETEiJ_G0017122Cnot610084.079ENSPNYG00000000321cnot6b10084.973Pundamilia_nyererei
MGP_SPRETEiJ_G0017122Cnot610084.946ENSPNAG00000028816cnot6b10084.946Pygocentrus_nattereri
MGP_SPRETEiJ_G0017122Cnot610086.201ENSPNAG00000029586cnot6a10086.201Pygocentrus_nattereri
MGP_SPRETEiJ_G0017122Cnot610098.564ENSRNOG00000054891Cnot610098.564Rattus_norvegicus
MGP_SPRETEiJ_G0017122Cnot610095.691ENSRBIG00000004309CNOT610095.691Rhinopithecus_bieti
MGP_SPRETEiJ_G0017122Cnot610095.691ENSRROG00000035378CNOT610096.104Rhinopithecus_roxellana
MGP_SPRETEiJ_G0017122Cnot610096.050ENSSBOG00000030494CNOT610096.050Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0017122Cnot610094.973ENSSHAG00000017436CNOT610094.973Sarcophilus_harrisii
MGP_SPRETEiJ_G0017122Cnot610087.276ENSSFOG00015015133CNOT610087.276Scleropages_formosus
MGP_SPRETEiJ_G0017122Cnot610085.484ENSSFOG00015022383cnot6a9685.484Scleropages_formosus
MGP_SPRETEiJ_G0017122Cnot610084.079ENSSMAG00000003084cnot6b10084.079Scophthalmus_maximus
MGP_SPRETEiJ_G0017122Cnot610085.868ENSSDUG00000004151cnot6b10085.868Seriola_dumerili
MGP_SPRETEiJ_G0017122Cnot610085.152ENSSLDG00000004448cnot6b10086.047Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0017122Cnot66476.536ENSSARG00000012650-10076.536Sorex_araneus
MGP_SPRETEiJ_G0017122Cnot610093.896ENSSPUG00000007893CNOT610093.896Sphenodon_punctatus
MGP_SPRETEiJ_G0017122Cnot610086.047ENSSPAG00000000149cnot6b10086.047Stegastes_partitus
MGP_SPRETEiJ_G0017122Cnot610096.230ENSSSCG00000014009CNOT610096.753Sus_scrofa
MGP_SPRETEiJ_G0017122Cnot610094.794ENSTGUG00000001119CNOT610094.794Taeniopygia_guttata
MGP_SPRETEiJ_G0017122Cnot610083.303ENSTRUG00000002818cnot6b10083.303Takifugu_rubripes
MGP_SPRETEiJ_G0017122Cnot610083.842ENSTNIG00000004443cnot6b9983.842Tetraodon_nigroviridis
MGP_SPRETEiJ_G0017122Cnot68766.119ENSTBEG00000017094-10066.119Tupaia_belangeri
MGP_SPRETEiJ_G0017122Cnot610096.409ENSTTRG00000009363CNOT610096.409Tursiops_truncatus
MGP_SPRETEiJ_G0017122Cnot67797.902ENSUAMG00000004579CNOT68897.902Ursus_americanus
MGP_SPRETEiJ_G0017122Cnot610092.466ENSUMAG00000024577CNOT610092.466Ursus_maritimus
MGP_SPRETEiJ_G0017122Cnot68395.561ENSVPAG00000003593CNOT68395.561Vicugna_pacos
MGP_SPRETEiJ_G0017122Cnot610096.768ENSVVUG00000026940CNOT610096.768Vulpes_vulpes
MGP_SPRETEiJ_G0017122Cnot610081.917ENSXCOG00000003360cnot6b10081.917Xiphophorus_couchianus
MGP_SPRETEiJ_G0017122Cnot610085.125ENSXMAG00000008730cnot6b10085.125Xiphophorus_maculatus

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