EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0017225 (Gene tree)
Gene ID: -
Gene Symbol: Larp1
Alias: 1810024J12Rik|3110040D16Rik|Larp
Full Name: La ribonucleoprotein domain family%2C member 1
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Plus strand
Length: 60370 bases
Position: chr11:57231613-57291982
Accession: 1890165
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0028173	La	PF05383.17	1.5e-20	1	1
MGP_SPRETEiJ_P0028174	La	PF05383.17	1.6e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0028175	-	747	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0028174	-	5537	-	MGP_SPRETEiJ_P0028174	1072 (aa)	-	-
MGP_SPRETEiJ_T0028173	-	5534	-	MGP_SPRETEiJ_P0028173	1072 (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0017225's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0017225's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0017225	Larp1	89	95.084	ENSG00000155506	LARP1	100	94.951	Homo_sapiens
MGP_SPRETEiJ_G0017225	Larp1	88	82.143	ENSAPOG00000020685	larp1	99	82.143	Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0017225	Larp1	89	95.298	ENSAMEG00000016673	LARP1	100	95.298	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0017225	Larp1	69	74.799	ENSACIG00000012994	larp1	94	75.374	Amphilophus_citrinellus
MGP_SPRETEiJ_G0017225	Larp1	77	70.388	ENSAOCG00000007792	larp1	98	70.623	Amphiprion_ocellaris
MGP_SPRETEiJ_G0017225	Larp1	99	64.551	ENSAPEG00000022246	larp1	100	64.733	Amphiprion_percula
MGP_SPRETEiJ_G0017225	Larp1	97	63.824	ENSATEG00000013523	larp1	98	63.795	Anabas_testudineus
MGP_SPRETEiJ_G0017225	Larp1	83	83.799	ENSAPLG00000007559	LARP1	100	83.799	Anas_platyrhynchos
MGP_SPRETEiJ_G0017225	Larp1	88	79.979	ENSACAG00000004071	LARP1	98	79.979	Anolis_carolinensis
MGP_SPRETEiJ_G0017225	Larp1	89	95.502	ENSANAG00000029949	LARP1	100	92.412	Aotus_nancymaae
MGP_SPRETEiJ_G0017225	Larp1	99	64.600	ENSACLG00000015256	larp1	98	67.203	Astatotilapia_calliptera
MGP_SPRETEiJ_G0017225	Larp1	88	70.440	ENSAMXG00000000859	larp1	97	66.413	Astyanax_mexicanus
MGP_SPRETEiJ_G0017225	Larp1	100	90.372	ENSBTAG00000008443	LARP1	100	90.191	Bos_taurus
MGP_SPRETEiJ_G0017225	Larp1	100	90.727	ENSCJAG00000004454	LARP1	100	90.545	Callithrix_jacchus
MGP_SPRETEiJ_G0017225	Larp1	89	96.013	ENSCAFG00000017639	LARP1	99	96.013	Canis_familiaris
MGP_SPRETEiJ_G0017225	Larp1	83	96.089	ENSCAFG00020023860	LARP1	100	96.089	Canis_lupus_dingo
MGP_SPRETEiJ_G0017225	Larp1	100	90.792	ENSCHIG00000014414	LARP1	100	90.498	Capra_hircus
MGP_SPRETEiJ_G0017225	Larp1	95	90.741	ENSTSYG00000013732	LARP1	99	91.614	Carlito_syrichta
MGP_SPRETEiJ_G0017225	Larp1	85	88.779	ENSCAPG00000013865	LARP1	92	88.779	Cavia_aperea
MGP_SPRETEiJ_G0017225	Larp1	89	96.118	ENSCPOG00000003377	LARP1	99	96.118	Cavia_porcellus
MGP_SPRETEiJ_G0017225	Larp1	100	90.818	ENSCCAG00000025201	LARP1	100	90.636	Cebus_capucinus
MGP_SPRETEiJ_G0017225	Larp1	100	87.364	ENSCATG00000030675	LARP1	93	95.084	Cercocebus_atys
MGP_SPRETEiJ_G0017225	Larp1	89	96.642	ENSCLAG00000012755	LARP1	97	96.642	Chinchilla_lanigera
MGP_SPRETEiJ_G0017225	Larp1	83	91.620	ENSCSAG00000010800	LARP1	100	91.508	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0017225	Larp1	85	88.210	ENSCHOG00000012716	LARP1	92	88.210	Choloepus_hoffmanni
MGP_SPRETEiJ_G0017225	Larp1	95	77.657	ENSCPBG00000002173	LARP1	97	77.821	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0017225	Larp1	89	95.188	ENSCANG00000037418	LARP1	93	95.188	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0017225	Larp1	100	97.388	ENSCGRG00001016913	Larp1	100	97.388	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0017225	Larp1	86	92.274	ENSCGRG00000009916	Larp1	100	92.818	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0017225	Larp1	99	63.612	ENSCSEG00000016431	larp1	99	63.702	Cynoglossus_semilaevis
MGP_SPRETEiJ_G0017225	Larp1	99	63.751	ENSCVAG00000022687	larp1	98	63.982	Cyprinodon_variegatus
MGP_SPRETEiJ_G0017225	Larp1	92	65.657	ENSDARG00000101722	larp1	96	65.559	Danio_rerio
MGP_SPRETEiJ_G0017225	Larp1	100	89.483	ENSDNOG00000012073	LARP1	100	88.849	Dasypus_novemcinctus
MGP_SPRETEiJ_G0017225	Larp1	89	92.760	ENSDORG00000002897	Larp1	98	92.655	Dipodomys_ordii
MGP_SPRETEiJ_G0017225	Larp1	82	95.682	ENSETEG00000020251	LARP1	100	95.682	Echinops_telfairi
MGP_SPRETEiJ_G0017225	Larp1	100	91.008	ENSEASG00005001070	LARP1	100	90.554	Equus_asinus_asinus
MGP_SPRETEiJ_G0017225	Larp1	100	91.190	ENSECAG00000017002	LARP1	79	90.554	Equus_caballus
MGP_SPRETEiJ_G0017225	Larp1	87	89.829	ENSEEUG00000001065	LARP1	100	89.829	Erinaceus_europaeus
MGP_SPRETEiJ_G0017225	Larp1	99	63.348	ENSELUG00000019403	larp1	99	64.163	Esox_lucius
MGP_SPRETEiJ_G0017225	Larp1	100	90.835	ENSFCAG00000000592	LARP1	100	90.835	Felis_catus
MGP_SPRETEiJ_G0017225	Larp1	77	81.250	ENSFALG00000008335	LARP1	98	81.611	Ficedula_albicollis
MGP_SPRETEiJ_G0017225	Larp1	89	96.327	ENSFDAG00000021125	LARP1	99	96.327	Fukomys_damarensis
MGP_SPRETEiJ_G0017225	Larp1	63	53.333	ENSFHEG00000020307	larp1	92	62.865	Fundulus_heteroclitus
MGP_SPRETEiJ_G0017225	Larp1	99	78.558	ENSGALG00000040109	LARP1	99	78.216	Gallus_gallus
MGP_SPRETEiJ_G0017225	Larp1	99	77.488	ENSGAGG00000025113	LARP1	97	81.215	Gopherus_agassizii
MGP_SPRETEiJ_G0017225	Larp1	89	95.084	ENSGGOG00000006048	LARP1	93	95.084	Gorilla_gorilla
MGP_SPRETEiJ_G0017225	Larp1	99	64.982	ENSHBUG00000020762	larp1	97	69.118	Haplochromis_burtoni
MGP_SPRETEiJ_G0017225	Larp1	100	91.101	ENSHGLG00000006267	LARP1	100	91.201	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0017225	Larp1	98	75.689	ENSHGLG00100003395	-	95	76.181	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0017225	Larp1	89	96.013	ENSHGLG00100014230	-	99	96.013	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0017225	Larp1	92	79.577	ENSHCOG00000010786	larp1	100	79.577	Hippocampus_comes
MGP_SPRETEiJ_G0017225	Larp1	97	62.595	ENSIPUG00000019105	Larp1	97	64.990	Ictalurus_punctatus
MGP_SPRETEiJ_G0017225	Larp1	89	93.599	ENSSTOG00000005678	LARP1	99	93.599	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0017225	Larp1	100	87.907	ENSJJAG00000016950	Larp1	100	87.094	Jaculus_jaculus
MGP_SPRETEiJ_G0017225	Larp1	97	66.511	ENSKMAG00000018468	larp1	98	67.444	Kryptolebias_marmoratus
MGP_SPRETEiJ_G0017225	Larp1	99	63.937	ENSLBEG00000027172	larp1	98	64.213	Labrus_bergylta
MGP_SPRETEiJ_G0017225	Larp1	94	70.879	ENSLOCG00000012457	larp1	99	70.879	Lepisosteus_oculatus
MGP_SPRETEiJ_G0017225	Larp1	100	89.741	ENSLAFG00000008991	LARP1	100	90.203	Loxodonta_africana
MGP_SPRETEiJ_G0017225	Larp1	89	94.770	ENSMFAG00000031651	LARP1	93	94.770	Macaca_fascicularis
MGP_SPRETEiJ_G0017225	Larp1	89	91.213	ENSMMUG00000009411	LARP1	99	91.109	Macaca_mulatta
MGP_SPRETEiJ_G0017225	Larp1	90	90.937	ENSMNEG00000039294	LARP1	100	94.749	Macaca_nemestrina
MGP_SPRETEiJ_G0017225	Larp1	89	95.188	ENSMLEG00000035142	LARP1	93	95.188	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0017225	Larp1	99	64.146	ENSMAMG00000021788	larp1	99	64.196	Mastacembelus_armatus
MGP_SPRETEiJ_G0017225	Larp1	99	64.600	ENSMZEG00005009345	larp1	98	67.203	Maylandia_zebra
MGP_SPRETEiJ_G0017225	Larp1	88	81.067	ENSMGAG00000005696	LARP1	99	81.067	Meleagris_gallopavo
MGP_SPRETEiJ_G0017225	Larp1	100	96.828	ENSMAUG00000001385	Larp1	100	96.828	Mesocricetus_auratus
MGP_SPRETEiJ_G0017225	Larp1	89	94.235	ENSMICG00000000837	LARP1	99	95.964	Microcebus_murinus
MGP_SPRETEiJ_G0017225	Larp1	100	97.108	ENSMOCG00000008920	Larp1	100	97.108	Microtus_ochrogaster
MGP_SPRETEiJ_G0017225	Larp1	88	59.198	ENSMMOG00000013364	larp1	95	52.935	Mola_mola
MGP_SPRETEiJ_G0017225	Larp1	89	83.091	ENSMODG00000008663	LARP1	99	83.091	Monodelphis_domestica
MGP_SPRETEiJ_G0017225	Larp1	99	64.337	ENSMALG00000017180	larp1	99	64.279	Monopterus_albus
MGP_SPRETEiJ_G0017225	Larp1	100	99.440	MGP_CAROLIEiJ_G0016383	Larp1	100	99.440	Mus_caroli
MGP_SPRETEiJ_G0017225	Larp1	100	99.720	ENSMUSG00000037331	Larp1	100	99.720	Mus_musculus
MGP_SPRETEiJ_G0017225	Larp1	100	98.884	MGP_PahariEiJ_G0017518	Larp1	100	98.884	Mus_pahari
MGP_SPRETEiJ_G0017225	Larp1	82	90.276	ENSMPUG00000013564	LARP1	99	90.055	Mustela_putorius_furo
MGP_SPRETEiJ_G0017225	Larp1	89	91.405	ENSMLUG00000002608	LARP1	100	91.405	Myotis_lucifugus
MGP_SPRETEiJ_G0017225	Larp1	90	91.701	ENSNGAG00000001098	Larp1	100	91.598	Nannospalax_galili
MGP_SPRETEiJ_G0017225	Larp1	90	66.767	ENSNBRG00000008963	larp1	97	66.969	Neolamprologus_brichardi
MGP_SPRETEiJ_G0017225	Larp1	89	91.937	ENSNLEG00000016588	LARP1	99	88.924	Nomascus_leucogenys
MGP_SPRETEiJ_G0017225	Larp1	89	76.996	ENSMEUG00000002957	LARP1	99	77.311	Notamacropus_eugenii
MGP_SPRETEiJ_G0017225	Larp1	89	96.222	ENSOPRG00000013014	LARP1	99	96.222	Ochotona_princeps
MGP_SPRETEiJ_G0017225	Larp1	89	95.488	ENSODEG00000010824	LARP1	99	95.488	Octodon_degus
MGP_SPRETEiJ_G0017225	Larp1	99	65.936	ENSONIG00000017308	larp1	99	65.874	Oreochromis_niloticus
MGP_SPRETEiJ_G0017225	Larp1	90	81.828	ENSOANG00000005096	LARP1	99	82.462	Ornithorhynchus_anatinus
MGP_SPRETEiJ_G0017225	Larp1	100	92.884	ENSOCUG00000013066	LARP1	100	92.791	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0017225	Larp1	99	63.364	ENSORLG00000000824	larp1	98	70.581	Oryzias_latipes
MGP_SPRETEiJ_G0017225	Larp1	99	63.462	ENSORLG00020022241	larp1	99	63.645	Oryzias_latipes_hni
MGP_SPRETEiJ_G0017225	Larp1	99	61.685	ENSORLG00015007538	larp1	99	62.147	Oryzias_latipes_hsok
MGP_SPRETEiJ_G0017225	Larp1	97	63.483	ENSOMEG00000003134	larp1	97	63.231	Oryzias_melastigma
MGP_SPRETEiJ_G0017225	Larp1	89	95.593	ENSOGAG00000016750	LARP1	99	95.593	Otolemur_garnettii
MGP_SPRETEiJ_G0017225	Larp1	89	92.984	ENSOARG00000009893	LARP1	99	93.403	Ovis_aries
MGP_SPRETEiJ_G0017225	Larp1	89	95.084	ENSPPAG00000042993	LARP1	93	95.084	Pan_paniscus
MGP_SPRETEiJ_G0017225	Larp1	90	92.997	ENSPPRG00000009780	LARP1	96	92.997	Panthera_pardus
MGP_SPRETEiJ_G0017225	Larp1	90	92.997	ENSPTIG00000007013	LARP1	96	92.997	Panthera_tigris_altaica
MGP_SPRETEiJ_G0017225	Larp1	99	87.694	ENSPTRG00000017447	LARP1	93	95.173	Pan_troglodytes
MGP_SPRETEiJ_G0017225	Larp1	100	87.455	ENSPANG00000008080	LARP1	93	95.084	Papio_anubis
MGP_SPRETEiJ_G0017225	Larp1	96	66.951	ENSPKIG00000010096	larp1	99	66.024	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0017225	Larp1	98	61.266	ENSPKIG00000017153	-	99	62.476	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0017225	Larp1	95	62.924	ENSPMGG00000011599	larp1	98	63.619	Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0017225	Larp1	89	94.444	ENSPEMG00000022523	Larp1	99	94.444	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0017225	Larp1	97	79.569	ENSPCIG00000019242	LARP1	90	79.756	Phascolarctos_cinereus
MGP_SPRETEiJ_G0017225	Larp1	97	64.604	ENSPFOG00000005836	larp1	98	64.286	Poecilia_formosa
MGP_SPRETEiJ_G0017225	Larp1	97	65.097	ENSPLAG00000008936	larp1	98	64.501	Poecilia_latipinna
MGP_SPRETEiJ_G0017225	Larp1	97	64.786	ENSPMEG00000013656	larp1	98	64.647	Poecilia_mexicana
MGP_SPRETEiJ_G0017225	Larp1	86	68.476	ENSPREG00000005726	larp1	98	67.409	Poecilia_reticulata
MGP_SPRETEiJ_G0017225	Larp1	89	90.031	ENSPCAG00000006407	LARP1	99	90.031	Procavia_capensis
MGP_SPRETEiJ_G0017225	Larp1	89	87.513	ENSPCOG00000016949	LARP1	99	91.081	Propithecus_coquereli
MGP_SPRETEiJ_G0017225	Larp1	100	90.308	ENSPVAG00000002262	LARP1	100	90.308	Pteropus_vampyrus
MGP_SPRETEiJ_G0017225	Larp1	99	64.510	ENSPNYG00000007938	larp1	98	67.203	Pundamilia_nyererei
MGP_SPRETEiJ_G0017225	Larp1	99	65.217	ENSPNAG00000021427	larp1	99	65.634	Pygocentrus_nattereri
MGP_SPRETEiJ_G0017225	Larp1	89	95.079	ENSRNOG00000031544	Larp1	99	95.079	Rattus_norvegicus
MGP_SPRETEiJ_G0017225	Larp1	89	95.178	ENSRBIG00000038005	LARP1	93	95.084	Rhinopithecus_bieti
MGP_SPRETEiJ_G0017225	Larp1	89	95.084	ENSRROG00000034073	LARP1	100	95.084	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0017225	Larp1	89	95.593	ENSSBOG00000019816	LARP1	100	91.850	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0017225	Larp1	89	84.551	ENSSHAG00000011115	LARP1	100	84.551	Sarcophilus_harrisii
MGP_SPRETEiJ_G0017225	Larp1	98	64.597	ENSSFOG00015018058	-	98	64.991	Scleropages_formosus
MGP_SPRETEiJ_G0017225	Larp1	89	68.219	ENSSFOG00015020304	larp1	95	66.931	Scleropages_formosus
MGP_SPRETEiJ_G0017225	Larp1	94	63.372	ENSSMAG00000007468	larp1	98	63.478	Scophthalmus_maximus
MGP_SPRETEiJ_G0017225	Larp1	99	64.178	ENSSDUG00000000268	larp1	97	69.865	Seriola_dumerili
MGP_SPRETEiJ_G0017225	Larp1	82	69.222	ENSSLDG00000016505	larp1	97	69.448	Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0017225	Larp1	57	92.580	ENSSARG00000013907	-	89	92.638	Sorex_araneus
MGP_SPRETEiJ_G0017225	Larp1	99	74.350	ENSSPUG00000012179	-	99	74.327	Sphenodon_punctatus
MGP_SPRETEiJ_G0017225	Larp1	99	64.510	ENSSPAG00000003910	larp1	98	64.923	Stegastes_partitus
MGP_SPRETEiJ_G0017225	Larp1	100	90.653	ENSSSCG00000017069	LARP1	100	95.536	Sus_scrofa
MGP_SPRETEiJ_G0017225	Larp1	85	83.097	ENSTGUG00000000704	LARP1	100	83.097	Taeniopygia_guttata
MGP_SPRETEiJ_G0017225	Larp1	99	62.912	ENSTRUG00000009470	larp1	99	63.403	Takifugu_rubripes
MGP_SPRETEiJ_G0017225	Larp1	82	94.231	ENSTBEG00000003381	LARP1	99	94.231	Tupaia_belangeri
MGP_SPRETEiJ_G0017225	Larp1	88	95.749	ENSTTRG00000015934	LARP1	99	95.488	Tursiops_truncatus
MGP_SPRETEiJ_G0017225	Larp1	100	91.016	ENSUAMG00000019334	LARP1	100	91.016	Ursus_americanus
MGP_SPRETEiJ_G0017225	Larp1	88	92.729	ENSUMAG00000002934	LARP1	99	92.729	Ursus_maritimus
MGP_SPRETEiJ_G0017225	Larp1	83	96.089	ENSVVUG00000004644	LARP1	100	96.089	Vulpes_vulpes
MGP_SPRETEiJ_G0017225	Larp1	94	74.136	ENSXETG00000008413	larp1	96	74.136	Xenopus_tropicalis
MGP_SPRETEiJ_G0017225	Larp1	83	73.243	ENSXCOG00000004022	larp1	97	73.243	Xiphophorus_couchianus
MGP_SPRETEiJ_G0017225	Larp1	97	64.545	ENSXMAG00000018780	larp1	99	63.914	Xiphophorus_maculatus