EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0017573 (Gene tree)
Gene ID: -
Gene Symbol: Hic1
Alias: HIC-1
Full Name: hypermethylated in cancer 1
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Minus strand
Length: 4936 bases
Position: chr11:75047591-75052526
Accession: 1338010
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0029611	zf-C2H2	PF00096.26	4e-21	1	4
MGP_SPRETEiJ_P0029611	zf-C2H2	PF00096.26	4e-21	2	4
MGP_SPRETEiJ_P0029611	zf-C2H2	PF00096.26	4e-21	3	4
MGP_SPRETEiJ_P0029611	zf-C2H2	PF00096.26	4e-21	4	4
MGP_SPRETEiJ_P0029611	zf-met	PF12874.7	9.3e-09	1	2
MGP_SPRETEiJ_P0029611	zf-met	PF12874.7	9.3e-09	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0029611	-	3478	-	MGP_SPRETEiJ_P0029611	890 (aa)	-	-
MGP_SPRETEiJ_T0029610	-	2320	-	MGP_SPRETEiJ_P0029610	711 (aa)	-	-
MGP_SPRETEiJ_T0029612	-	645	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0017573's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0017573's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0017573	Hic1	100	94.538	ENSG00000177374	HIC1	100	100.000	Homo_sapiens
MGP_SPRETEiJ_G0017573	Hic1	100	48.404	ENSAPOG00000020900	hic1	78	58.166	Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0017573	Hic1	70	98.876	ENSAMEG00000007657	HIC1	97	92.439	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0017573	Hic1	100	48.367	ENSAOCG00000023291	hic1	84	53.640	Amphiprion_ocellaris
MGP_SPRETEiJ_G0017573	Hic1	100	49.041	ENSAPEG00000008510	hic1	86	59.701	Amphiprion_percula
MGP_SPRETEiJ_G0017573	Hic1	100	89.902	ENSANAG00000037442	HIC1	98	90.278	Aotus_nancymaae
MGP_SPRETEiJ_G0017573	Hic1	100	50.510	ENSAMXG00000024869	hic1	97	48.342	Astyanax_mexicanus
MGP_SPRETEiJ_G0017573	Hic1	100	94.818	ENSBTAG00000025130	HIC1	98	94.313	Bos_taurus
MGP_SPRETEiJ_G0017573	Hic1	100	93.147	ENSCJAG00000042739	HIC1	98	93.629	Callithrix_jacchus
MGP_SPRETEiJ_G0017573	Hic1	100	94.398	ENSCAFG00000019257	HIC1	98	94.313	Canis_familiaris
MGP_SPRETEiJ_G0017573	Hic1	100	94.398	ENSCAFG00020009802	HIC1	100	94.258	Canis_lupus_dingo
MGP_SPRETEiJ_G0017573	Hic1	100	95.098	ENSCHIG00000015829	HIC1	98	94.591	Capra_hircus
MGP_SPRETEiJ_G0017573	Hic1	69	96.739	ENSTSYG00000032991	HIC1	97	98.958	Carlito_syrichta
MGP_SPRETEiJ_G0017573	Hic1	100	93.277	ENSCPOG00000020382	HIC1	98	92.510	Cavia_porcellus
MGP_SPRETEiJ_G0017573	Hic1	100	93.128	ENSCCAG00000030944	HIC1	98	93.611	Cebus_capucinus
MGP_SPRETEiJ_G0017573	Hic1	100	94.258	ENSCATG00000037347	HIC1	98	93.759	Cercocebus_atys
MGP_SPRETEiJ_G0017573	Hic1	100	94.258	ENSCLAG00000008072	HIC1	98	93.065	Chinchilla_lanigera
MGP_SPRETEiJ_G0017573	Hic1	100	94.398	ENSCSAG00000013805	HIC1	98	93.759	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0017573	Hic1	90	61.280	ENSCPBG00000000255	HIC1	98	59.132	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0017573	Hic1	100	97.339	ENSCGRG00001018912	Hic1	98	97.365	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0017573	Hic1	100	92.686	ENSCGRG00000008158	Hic1	98	92.758	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0017573	Hic1	99	47.919	ENSCSEG00000013032	hic1	81	54.475	Cynoglossus_semilaevis
MGP_SPRETEiJ_G0017573	Hic1	100	93.417	ENSDNOG00000049226	HIC1	95	92.818	Dasypus_novemcinctus
MGP_SPRETEiJ_G0017573	Hic1	73	98.347	ENSDORG00000027749	Hic1	77	98.347	Dipodomys_ordii
MGP_SPRETEiJ_G0017573	Hic1	100	94.398	ENSEASG00005009326	HIC1	100	93.277	Equus_asinus_asinus
MGP_SPRETEiJ_G0017573	Hic1	100	94.258	ENSECAG00000030580	HIC1	98	93.065	Equus_caballus
MGP_SPRETEiJ_G0017573	Hic1	100	49.558	ENSELUG00000001329	hic1	52	51.152	Esox_lucius
MGP_SPRETEiJ_G0017573	Hic1	100	95.238	ENSFCAG00000025756	HIC1	98	94.591	Felis_catus
MGP_SPRETEiJ_G0017573	Hic1	99	60.816	ENSFALG00000006543	HIC1	99	58.936	Ficedula_albicollis
MGP_SPRETEiJ_G0017573	Hic1	72	91.989	ENSFDAG00000021489	HIC1	100	90.331	Fukomys_damarensis
MGP_SPRETEiJ_G0017573	Hic1	99	62.432	ENSGALG00000042077	HIC1	96	61.507	Gallus_gallus
MGP_SPRETEiJ_G0017573	Hic1	83	49.096	ENSGACG00000010848	hic1	82	55.892	Gasterosteus_aculeatus
MGP_SPRETEiJ_G0017573	Hic1	100	60.414	ENSGAGG00000025616	HIC1	97	58.743	Gopherus_agassizii
MGP_SPRETEiJ_G0017573	Hic1	88	97.849	ENSGGOG00000027584	HIC1	99	97.849	Gorilla_gorilla
MGP_SPRETEiJ_G0017573	Hic1	100	93.417	ENSHGLG00000012044	HIC1	98	92.649	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0017573	Hic1	71	95.455	ENSHGLG00100013587	HIC1	100	95.455	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0017573	Hic1	100	50.759	ENSIPUG00000004604	hic1	97	49.172	Ictalurus_punctatus
MGP_SPRETEiJ_G0017573	Hic1	100	94.561	ENSSTOG00000011792	HIC1	98	94.337	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0017573	Hic1	100	95.798	ENSJJAG00000017367	Hic1	98	95.284	Jaculus_jaculus
MGP_SPRETEiJ_G0017573	Hic1	100	55.918	ENSLACG00000007028	HIC1	97	55.144	Latimeria_chalumnae
MGP_SPRETEiJ_G0017573	Hic1	80	62.363	ENSLOCG00000006478	hic1	89	61.690	Lepisosteus_oculatus
MGP_SPRETEiJ_G0017573	Hic1	100	94.398	ENSMFAG00000044684	HIC1	98	93.759	Macaca_fascicularis
MGP_SPRETEiJ_G0017573	Hic1	100	94.398	ENSMMUG00000048710	HIC1	100	93.697	Macaca_mulatta
MGP_SPRETEiJ_G0017573	Hic1	100	94.398	ENSMNEG00000013172	HIC1	98	93.759	Macaca_nemestrina
MGP_SPRETEiJ_G0017573	Hic1	100	49.560	ENSMAMG00000017930	hic1	84	53.668	Mastacembelus_armatus
MGP_SPRETEiJ_G0017573	Hic1	75	72.277	ENSMGAG00000005397	HIC1	93	72.000	Meleagris_gallopavo
MGP_SPRETEiJ_G0017573	Hic1	100	97.619	ENSMAUG00000019881	Hic1	98	97.642	Mesocricetus_auratus
MGP_SPRETEiJ_G0017573	Hic1	100	94.398	ENSMICG00000012908	HIC1	98	93.759	Microcebus_murinus
MGP_SPRETEiJ_G0017573	Hic1	100	93.978	ENSMOCG00000001275	Hic1	98	93.343	Microtus_ochrogaster
MGP_SPRETEiJ_G0017573	Hic1	100	48.323	ENSMMOG00000014282	hic1	52	50.682	Mola_mola
MGP_SPRETEiJ_G0017573	Hic1	100	61.392	ENSMODG00000010600	HIC1	98	70.867	Monodelphis_domestica
MGP_SPRETEiJ_G0017573	Hic1	100	99.020	MGP_CAROLIEiJ_G0016730	-	100	94.020	Mus_caroli
MGP_SPRETEiJ_G0017573	Hic1	100	99.300	ENSMUSG00000043099	Hic1	100	99.216	Mus_musculus
MGP_SPRETEiJ_G0017573	Hic1	100	94.678	ENSMPUG00000019502	HIC1	100	94.258	Mustela_putorius_furo
MGP_SPRETEiJ_G0017573	Hic1	90	94.286	ENSMLUG00000010527	HIC1	98	93.878	Myotis_lucifugus
MGP_SPRETEiJ_G0017573	Hic1	100	96.078	ENSNGAG00000020689	Hic1	98	96.117	Nannospalax_galili
MGP_SPRETEiJ_G0017573	Hic1	70	95.000	ENSNLEG00000035047	-	81	95.000	Nomascus_leucogenys
MGP_SPRETEiJ_G0017573	Hic1	100	93.838	ENSODEG00000007964	HIC1	99	92.917	Octodon_degus
MGP_SPRETEiJ_G0017573	Hic1	100	47.441	ENSORLG00000029930	hic1	51	50.685	Oryzias_latipes
MGP_SPRETEiJ_G0017573	Hic1	100	46.764	ENSORLG00020008812	hic1	84	53.516	Oryzias_latipes_hni
MGP_SPRETEiJ_G0017573	Hic1	100	46.886	ENSORLG00015000406	hic1	84	54.086	Oryzias_latipes_hsok
MGP_SPRETEiJ_G0017573	Hic1	100	47.930	ENSOMEG00000004793	hic1	84	53.150	Oryzias_melastigma
MGP_SPRETEiJ_G0017573	Hic1	100	94.118	ENSOGAG00000034845	HIC1	98	93.620	Otolemur_garnettii
MGP_SPRETEiJ_G0017573	Hic1	100	95.238	ENSPPRG00000013038	HIC1	98	94.591	Panthera_pardus
MGP_SPRETEiJ_G0017573	Hic1	100	94.538	ENSPTRG00000047506	HIC1	98	94.036	Pan_troglodytes
MGP_SPRETEiJ_G0017573	Hic1	87	85.784	ENSPANG00000024595	HIC1	95	86.820	Papio_anubis
MGP_SPRETEiJ_G0017573	Hic1	80	63.793	ENSPKIG00000013932	hic1	73	62.555	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0017573	Hic1	78	57.491	ENSPSIG00000007902	HIC1	99	55.944	Pelodiscus_sinensis
MGP_SPRETEiJ_G0017573	Hic1	100	49.656	ENSPMGG00000011581	hic1	98	47.761	Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0017573	Hic1	100	97.899	ENSPEMG00000021229	Hic1	98	97.920	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0017573	Hic1	100	77.600	ENSPCIG00000019061	HIC1	98	78.800	Phascolarctos_cinereus
MGP_SPRETEiJ_G0017573	Hic1	100	49.052	ENSPFOG00000004471	hic1	51	50.115	Poecilia_formosa
MGP_SPRETEiJ_G0017573	Hic1	100	49.428	ENSPLAG00000022329	hic1	51	50.577	Poecilia_latipinna
MGP_SPRETEiJ_G0017573	Hic1	100	49.365	ENSPMEG00000004584	hic1	51	50.115	Poecilia_mexicana
MGP_SPRETEiJ_G0017573	Hic1	100	49.045	ENSPREG00000010341	hic1	84	54.902	Poecilia_reticulata
MGP_SPRETEiJ_G0017573	Hic1	87	97.857	ENSPPYG00000007789	HIC1	97	97.959	Pongo_abelii
MGP_SPRETEiJ_G0017573	Hic1	71	96.610	ENSPCAG00000000535	HIC1	70	96.610	Procavia_capensis
MGP_SPRETEiJ_G0017573	Hic1	100	94.118	ENSPCOG00000023965	HIC1	98	93.481	Propithecus_coquereli
MGP_SPRETEiJ_G0017573	Hic1	100	94.398	ENSPVAG00000002158	HIC1	98	93.897	Pteropus_vampyrus
MGP_SPRETEiJ_G0017573	Hic1	100	54.029	ENSPNAG00000001133	hic1	98	50.988	Pygocentrus_nattereri
MGP_SPRETEiJ_G0017573	Hic1	76	97.584	ENSRNOG00000046405	Hic1	99	97.584	Rattus_norvegicus
MGP_SPRETEiJ_G0017573	Hic1	99	94.730	ENSRNOG00000057619	LOC100912068	98	94.093	Rattus_norvegicus
MGP_SPRETEiJ_G0017573	Hic1	100	94.398	ENSRROG00000031780	HIC1	98	93.759	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0017573	Hic1	99	47.273	ENSSFOG00015005452	hic1	82	54.545	Scleropages_formosus
MGP_SPRETEiJ_G0017573	Hic1	96	49.213	ENSSFOG00015004559	hic1	94	47.632	Scleropages_formosus
MGP_SPRETEiJ_G0017573	Hic1	100	49.182	ENSSMAG00000009823	hic1	83	55.859	Scophthalmus_maximus
MGP_SPRETEiJ_G0017573	Hic1	100	48.428	ENSSLDG00000002022	hic1	84	53.462	Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0017573	Hic1	58	98.755	ENSSARG00000010162	-	57	98.755	Sorex_araneus
MGP_SPRETEiJ_G0017573	Hic1	100	59.527	ENSSPUG00000007168	HIC1	97	56.456	Sphenodon_punctatus
MGP_SPRETEiJ_G0017573	Hic1	100	94.685	ENSSSCG00000025717	HIC1	98	92.382	Sus_scrofa
MGP_SPRETEiJ_G0017573	Hic1	99	62.791	ENSTGUG00000005835	HIC1	99	62.192	Taeniopygia_guttata
MGP_SPRETEiJ_G0017573	Hic1	100	95.098	ENSUAMG00000025149	HIC1	100	94.818	Ursus_americanus
MGP_SPRETEiJ_G0017573	Hic1	100	94.398	ENSVVUG00000021725	HIC1	100	94.258	Vulpes_vulpes
MGP_SPRETEiJ_G0017573	Hic1	99	60.685	ENSXETG00000023803	hic1	99	59.452	Xenopus_tropicalis
MGP_SPRETEiJ_G0017573	Hic1	100	48.992	ENSXCOG00000009641	hic1	53	50.000	Xiphophorus_couchianus
MGP_SPRETEiJ_G0017573	Hic1	100	48.546	ENSXMAG00000023343	hic1	84	55.294	Xiphophorus_maculatus