EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0017672 (Gene tree)
Gene ID: -
Gene Symbol: Utp6
Alias: 4732497O03Rik|HCA66
Full Name: UTP6 small subunit processome component
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Minus strand
Length: 30015 bases
Position: chr11:80134652-80164666
Accession: 2445193
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0030061	U3_assoc_6	PF08640.11	3.4e-25	1	1
MGP_SPRETEiJ_P0030062	U3_assoc_6	PF08640.11	3.4e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0030061	-	2308	-	MGP_SPRETEiJ_P0030061	597 (aa)	-	-
MGP_SPRETEiJ_T0030062	-	3881	-	MGP_SPRETEiJ_P0030062	597 (aa)	-	-
MGP_SPRETEiJ_T0030063	-	648	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0030064	-	559	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0017672's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0017672's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0017672	Utp6	100	85.595	ENSG00000108651	UTP6	99	85.595	Homo_sapiens
MGP_SPRETEiJ_G0017672	Utp6	100	54.941	ENSAPOG00000000435	utp6	99	54.941	Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0017672	Utp6	99	85.235	ENSAMEG00000005443	UTP6	99	85.235	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0017672	Utp6	100	53.936	ENSACIG00000004124	utp6	99	53.936	Amphilophus_citrinellus
MGP_SPRETEiJ_G0017672	Utp6	100	54.606	ENSAOCG00000016812	utp6	99	54.606	Amphiprion_ocellaris
MGP_SPRETEiJ_G0017672	Utp6	100	54.271	ENSAPEG00000023565	utp6	99	54.271	Amphiprion_percula
MGP_SPRETEiJ_G0017672	Utp6	100	55.276	ENSATEG00000003401	utp6	99	55.276	Anabas_testudineus
MGP_SPRETEiJ_G0017672	Utp6	99	65.025	ENSAPLG00000005821	UTP6	98	65.025	Anas_platyrhynchos
MGP_SPRETEiJ_G0017672	Utp6	100	64.489	ENSACAG00000009472	UTP6	99	64.489	Anolis_carolinensis
MGP_SPRETEiJ_G0017672	Utp6	100	85.762	ENSANAG00000034603	UTP6	99	85.762	Aotus_nancymaae
MGP_SPRETEiJ_G0017672	Utp6	100	56.616	ENSACLG00000006728	utp6	99	56.616	Astatotilapia_calliptera
MGP_SPRETEiJ_G0017672	Utp6	100	56.281	ENSAMXG00000009478	utp6	99	56.281	Astyanax_mexicanus
MGP_SPRETEiJ_G0017672	Utp6	99	72.987	ENSBTAG00000003769	-	98	72.987	Bos_taurus
MGP_SPRETEiJ_G0017672	Utp6	99	74.497	ENSBTAG00000015612	UTP6	99	74.497	Bos_taurus
MGP_SPRETEiJ_G0017672	Utp6	100	86.097	ENSCJAG00000014115	UTP6	99	86.097	Callithrix_jacchus
MGP_SPRETEiJ_G0017672	Utp6	100	86.097	ENSCAFG00000018507	UTP6	99	86.097	Canis_familiaris
MGP_SPRETEiJ_G0017672	Utp6	100	86.097	ENSCAFG00020014678	UTP6	99	86.097	Canis_lupus_dingo
MGP_SPRETEiJ_G0017672	Utp6	99	74.664	ENSCHIG00000017954	-	99	74.664	Capra_hircus
MGP_SPRETEiJ_G0017672	Utp6	99	74.497	ENSCHIG00000009726	-	99	74.497	Capra_hircus
MGP_SPRETEiJ_G0017672	Utp6	100	76.214	ENSTSYG00000002202	UTP6	99	76.214	Carlito_syrichta
MGP_SPRETEiJ_G0017672	Utp6	90	74.586	ENSCAPG00000017595	UTP6	98	74.586	Cavia_aperea
MGP_SPRETEiJ_G0017672	Utp6	100	88.107	ENSCPOG00000014294	UTP6	100	88.107	Cavia_porcellus
MGP_SPRETEiJ_G0017672	Utp6	100	79.062	ENSCCAG00000033318	-	99	79.062	Cebus_capucinus
MGP_SPRETEiJ_G0017672	Utp6	100	85.595	ENSCATG00000034868	UTP6	99	85.595	Cercocebus_atys
MGP_SPRETEiJ_G0017672	Utp6	100	89.112	ENSCLAG00000007274	UTP6	99	89.112	Chinchilla_lanigera
MGP_SPRETEiJ_G0017672	Utp6	100	85.092	ENSCSAG00000006595	UTP6	99	85.092	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0017672	Utp6	88	64.855	ENSCHOG00000010940	-	88	64.855	Choloepus_hoffmanni
MGP_SPRETEiJ_G0017672	Utp6	100	68.677	ENSCPBG00000004652	UTP6	99	68.677	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0017672	Utp6	99	32.358	ENSCING00000022947	-	99	32.358	Ciona_intestinalis
MGP_SPRETEiJ_G0017672	Utp6	53	38.390	ENSCSAVG00000011416	-	98	38.390	Ciona_savignyi
MGP_SPRETEiJ_G0017672	Utp6	87	63.931	ENSCANG00000031141	UTP6	89	63.931	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0017672	Utp6	100	93.467	ENSCGRG00001000046	Utp6	100	93.467	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0017672	Utp6	95	93.640	ENSCGRG00000011543	Utp6	100	93.640	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0017672	Utp6	100	51.656	ENSCSEG00000013422	utp6	99	67.213	Cynoglossus_semilaevis
MGP_SPRETEiJ_G0017672	Utp6	100	54.606	ENSCVAG00000020322	utp6	99	54.606	Cyprinodon_variegatus
MGP_SPRETEiJ_G0017672	Utp6	100	53.769	ENSDARG00000098433	utp6	100	64.088	Danio_rerio
MGP_SPRETEiJ_G0017672	Utp6	100	87.437	ENSDNOG00000037018	UTP6	99	87.437	Dasypus_novemcinctus
MGP_SPRETEiJ_G0017672	Utp6	91	87.363	ENSDORG00000003843	Utp6	100	87.363	Dipodomys_ordii
MGP_SPRETEiJ_G0017672	Utp6	100	87.270	ENSEASG00005010870	UTP6	99	87.270	Equus_asinus_asinus
MGP_SPRETEiJ_G0017672	Utp6	100	86.935	ENSECAG00000022217	UTP6	99	86.935	Equus_caballus
MGP_SPRETEiJ_G0017672	Utp6	100	55.276	ENSELUG00000006618	utp6	99	55.276	Esox_lucius
MGP_SPRETEiJ_G0017672	Utp6	100	83.612	ENSFCAG00000015795	UTP6	99	83.612	Felis_catus
MGP_SPRETEiJ_G0017672	Utp6	100	66.332	ENSFALG00000002282	UTP6	99	66.332	Ficedula_albicollis
MGP_SPRETEiJ_G0017672	Utp6	100	88.107	ENSFDAG00000019506	UTP6	100	88.107	Fukomys_damarensis
MGP_SPRETEiJ_G0017672	Utp6	100	54.682	ENSFHEG00000010373	utp6	99	54.682	Fundulus_heteroclitus
MGP_SPRETEiJ_G0017672	Utp6	100	54.606	ENSGMOG00000011958	utp6	99	54.606	Gadus_morhua
MGP_SPRETEiJ_G0017672	Utp6	100	65.997	ENSGALG00000003260	UTP6	99	65.997	Gallus_gallus
MGP_SPRETEiJ_G0017672	Utp6	100	54.682	ENSGAFG00000008505	utp6	99	54.682	Gambusia_affinis
MGP_SPRETEiJ_G0017672	Utp6	100	55.276	ENSGACG00000019424	utp6	99	55.276	Gasterosteus_aculeatus
MGP_SPRETEiJ_G0017672	Utp6	100	67.337	ENSGAGG00000004820	UTP6	99	67.337	Gopherus_agassizii
MGP_SPRETEiJ_G0017672	Utp6	100	85.427	ENSGGOG00000013569	UTP6	99	85.427	Gorilla_gorilla
MGP_SPRETEiJ_G0017672	Utp6	99	68.792	ENSGGOG00000026003	-	99	68.792	Gorilla_gorilla
MGP_SPRETEiJ_G0017672	Utp6	100	56.616	ENSHBUG00000018668	utp6	99	56.616	Haplochromis_burtoni
MGP_SPRETEiJ_G0017672	Utp6	100	87.772	ENSHGLG00000010332	UTP6	100	87.772	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0017672	Utp6	99	81.481	ENSHGLG00000008642	-	99	81.481	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0017672	Utp6	100	84.757	ENSHGLG00100014271	-	100	84.757	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0017672	Utp6	95	82.425	ENSHGLG00100006047	-	99	82.425	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0017672	Utp6	100	54.271	ENSHCOG00000017277	utp6	99	54.271	Hippocampus_comes
MGP_SPRETEiJ_G0017672	Utp6	100	55.611	ENSIPUG00000022587	Utp6	99	55.611	Ictalurus_punctatus
MGP_SPRETEiJ_G0017672	Utp6	100	87.437	ENSSTOG00000015875	UTP6	100	87.437	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0017672	Utp6	100	55.276	ENSKMAG00000021631	utp6	99	55.276	Kryptolebias_marmoratus
MGP_SPRETEiJ_G0017672	Utp6	100	56.114	ENSLBEG00000002115	utp6	99	56.114	Labrus_bergylta
MGP_SPRETEiJ_G0017672	Utp6	100	65.997	ENSLACG00000017158	UTP6	99	65.997	Latimeria_chalumnae
MGP_SPRETEiJ_G0017672	Utp6	91	59.633	ENSLOCG00000013797	utp6	90	59.633	Lepisosteus_oculatus
MGP_SPRETEiJ_G0017672	Utp6	100	85.260	ENSLAFG00000013008	UTP6	99	85.260	Loxodonta_africana
MGP_SPRETEiJ_G0017672	Utp6	100	85.595	ENSMFAG00000038842	UTP6	99	85.595	Macaca_fascicularis
MGP_SPRETEiJ_G0017672	Utp6	99	61.037	ENSMFAG00000041904	-	99	61.037	Macaca_fascicularis
MGP_SPRETEiJ_G0017672	Utp6	100	85.595	ENSMMUG00000020403	UTP6	99	85.595	Macaca_mulatta
MGP_SPRETEiJ_G0017672	Utp6	100	85.595	ENSMNEG00000039480	UTP6	99	85.595	Macaca_nemestrina
MGP_SPRETEiJ_G0017672	Utp6	99	67.677	ENSMLEG00000039364	-	99	67.677	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0017672	Utp6	100	71.285	ENSMLEG00000032174	UTP6	99	71.285	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0017672	Utp6	100	54.682	ENSMAMG00000002228	utp6	99	54.682	Mastacembelus_armatus
MGP_SPRETEiJ_G0017672	Utp6	100	56.616	ENSMZEG00005023895	utp6	99	56.616	Maylandia_zebra
MGP_SPRETEiJ_G0017672	Utp6	95	65.845	ENSMGAG00000008111	UTP6	99	65.845	Meleagris_gallopavo
MGP_SPRETEiJ_G0017672	Utp6	100	93.802	ENSMAUG00000021895	Utp6	100	93.802	Mesocricetus_auratus
MGP_SPRETEiJ_G0017672	Utp6	100	81.072	ENSMICG00000002632	UTP6	99	81.072	Microcebus_murinus
MGP_SPRETEiJ_G0017672	Utp6	100	92.797	ENSMOCG00000014163	Utp6	100	92.797	Microtus_ochrogaster
MGP_SPRETEiJ_G0017672	Utp6	100	53.846	ENSMMOG00000008653	utp6	99	66.102	Mola_mola
MGP_SPRETEiJ_G0017672	Utp6	99	68.289	ENSMODG00000019206	UTP6	99	68.174	Monodelphis_domestica
MGP_SPRETEiJ_G0017672	Utp6	100	55.184	ENSMALG00000021112	utp6	99	55.184	Monopterus_albus
MGP_SPRETEiJ_G0017672	Utp6	100	98.827	MGP_CAROLIEiJ_G0016828	Utp6	100	98.827	Mus_caroli
MGP_SPRETEiJ_G0017672	Utp6	100	99.162	ENSMUSG00000035575	Utp6	100	99.162	Mus_musculus
MGP_SPRETEiJ_G0017672	Utp6	100	80.301	MGP_PahariEiJ_G0017965	Utp6	100	80.301	Mus_pahari
MGP_SPRETEiJ_G0017672	Utp6	100	84.087	ENSMPUG00000014581	UTP6	99	84.087	Mustela_putorius_furo
MGP_SPRETEiJ_G0017672	Utp6	100	86.265	ENSMLUG00000016422	UTP6	99	86.265	Myotis_lucifugus
MGP_SPRETEiJ_G0017672	Utp6	100	89.782	ENSNGAG00000015482	Utp6	100	89.782	Nannospalax_galili
MGP_SPRETEiJ_G0017672	Utp6	100	56.449	ENSNBRG00000019714	utp6	99	56.449	Neolamprologus_brichardi
MGP_SPRETEiJ_G0017672	Utp6	100	84.590	ENSNLEG00000011009	UTP6	99	84.590	Nomascus_leucogenys
MGP_SPRETEiJ_G0017672	Utp6	89	71.631	ENSOPRG00000008446	-	89	71.631	Ochotona_princeps
MGP_SPRETEiJ_G0017672	Utp6	66	85.232	ENSODEG00000011971	UTP6	100	85.232	Octodon_degus
MGP_SPRETEiJ_G0017672	Utp6	100	56.616	ENSONIG00000018090	utp6	99	56.616	Oreochromis_niloticus
MGP_SPRETEiJ_G0017672	Utp6	98	66.497	ENSOANG00000004279	UTP6	99	66.497	Ornithorhynchus_anatinus
MGP_SPRETEiJ_G0017672	Utp6	100	83.920	ENSOCUG00000016980	UTP6	99	83.920	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0017672	Utp6	100	56.020	ENSORLG00000003546	utp6	64	56.020	Oryzias_latipes
MGP_SPRETEiJ_G0017672	Utp6	100	56.020	ENSORLG00020010377	utp6	99	56.020	Oryzias_latipes_hni
MGP_SPRETEiJ_G0017672	Utp6	100	55.351	ENSORLG00015008893	utp6	99	55.351	Oryzias_latipes_hsok
MGP_SPRETEiJ_G0017672	Utp6	100	55.853	ENSOMEG00000017487	utp6	99	55.853	Oryzias_melastigma
MGP_SPRETEiJ_G0017672	Utp6	87	75.810	ENSOGAG00000004511	UTP6	100	75.810	Otolemur_garnettii
MGP_SPRETEiJ_G0017672	Utp6	99	74.497	ENSOARG00000013474	UTP6	99	74.497	Ovis_aries
MGP_SPRETEiJ_G0017672	Utp6	100	85.762	ENSPPAG00000038089	UTP6	99	85.762	Pan_paniscus
MGP_SPRETEiJ_G0017672	Utp6	99	69.631	ENSPPAG00000016895	-	99	69.631	Pan_paniscus
MGP_SPRETEiJ_G0017672	Utp6	100	87.102	ENSPPRG00000001010	UTP6	99	87.102	Panthera_pardus
MGP_SPRETEiJ_G0017672	Utp6	100	87.102	ENSPTIG00000013913	UTP6	99	87.102	Panthera_tigris_altaica
MGP_SPRETEiJ_G0017672	Utp6	99	69.463	ENSPTRG00000044798	-	99	69.463	Pan_troglodytes
MGP_SPRETEiJ_G0017672	Utp6	100	85.762	ENSPTRG00000008977	UTP6	99	85.762	Pan_troglodytes
MGP_SPRETEiJ_G0017672	Utp6	100	82.776	ENSPANG00000023113	UTP6	99	82.776	Papio_anubis
MGP_SPRETEiJ_G0017672	Utp6	99	67.622	ENSPANG00000034274	-	99	67.622	Papio_anubis
MGP_SPRETEiJ_G0017672	Utp6	100	54.682	ENSPKIG00000004653	utp6	99	54.682	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0017672	Utp6	100	67.504	ENSPSIG00000012435	UTP6	99	67.504	Pelodiscus_sinensis
MGP_SPRETEiJ_G0017672	Utp6	100	55.017	ENSPMGG00000009548	utp6	99	55.017	Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0017672	Utp6	100	93.300	ENSPEMG00000014081	Utp6	100	93.300	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0017672	Utp6	93	45.471	ENSPMAG00000009561	utp6	99	45.471	Petromyzon_marinus
MGP_SPRETEiJ_G0017672	Utp6	100	69.347	ENSPCIG00000029968	UTP6	86	69.347	Phascolarctos_cinereus
MGP_SPRETEiJ_G0017672	Utp6	100	54.515	ENSPFOG00000013918	utp6	99	54.515	Poecilia_formosa
MGP_SPRETEiJ_G0017672	Utp6	100	54.849	ENSPLAG00000017825	utp6	99	54.849	Poecilia_latipinna
MGP_SPRETEiJ_G0017672	Utp6	100	54.515	ENSPMEG00000008133	utp6	99	54.515	Poecilia_mexicana
MGP_SPRETEiJ_G0017672	Utp6	100	54.104	ENSPREG00000013108	utp6	99	54.104	Poecilia_reticulata
MGP_SPRETEiJ_G0017672	Utp6	100	82.077	ENSPPYG00000008154	UTP6	99	82.077	Pongo_abelii
MGP_SPRETEiJ_G0017672	Utp6	67	87.500	ENSPCAG00000014878	-	69	60.372	Procavia_capensis
MGP_SPRETEiJ_G0017672	Utp6	100	80.570	ENSPCOG00000010224	UTP6	99	80.570	Propithecus_coquereli
MGP_SPRETEiJ_G0017672	Utp6	100	82.245	ENSPVAG00000015759	UTP6	99	82.245	Pteropus_vampyrus
MGP_SPRETEiJ_G0017672	Utp6	100	56.281	ENSPNYG00000002290	utp6	99	56.281	Pundamilia_nyererei
MGP_SPRETEiJ_G0017672	Utp6	100	53.434	ENSPNAG00000027370	utp6	99	53.434	Pygocentrus_nattereri
MGP_SPRETEiJ_G0017672	Utp6	100	92.797	ENSRNOG00000014209	Utp6	100	92.797	Rattus_norvegicus
MGP_SPRETEiJ_G0017672	Utp6	100	84.757	ENSRBIG00000020822	UTP6	99	84.757	Rhinopithecus_bieti
MGP_SPRETEiJ_G0017672	Utp6	100	84.757	ENSRROG00000036838	UTP6	99	84.757	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0017672	Utp6	100	55.760	ENSSFOG00015005978	utp6	99	55.760	Scleropages_formosus
MGP_SPRETEiJ_G0017672	Utp6	100	55.109	ENSSMAG00000014772	utp6	99	55.109	Scophthalmus_maximus
MGP_SPRETEiJ_G0017672	Utp6	100	55.611	ENSSDUG00000000329	utp6	99	55.611	Seriola_dumerili
MGP_SPRETEiJ_G0017672	Utp6	100	55.444	ENSSLDG00000016724	utp6	99	55.444	Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0017672	Utp6	99	74.664	ENSSARG00000010778	UTP6	99	74.664	Sorex_araneus
MGP_SPRETEiJ_G0017672	Utp6	100	67.002	ENSSPUG00000005273	UTP6	99	67.002	Sphenodon_punctatus
MGP_SPRETEiJ_G0017672	Utp6	100	53.099	ENSSPAG00000011871	utp6	99	53.099	Stegastes_partitus
MGP_SPRETEiJ_G0017672	Utp6	100	85.427	ENSSSCG00000017745	UTP6	99	85.427	Sus_scrofa
MGP_SPRETEiJ_G0017672	Utp6	100	66.388	ENSTGUG00000004999	UTP6	99	66.388	Taeniopygia_guttata
MGP_SPRETEiJ_G0017672	Utp6	100	54.439	ENSTRUG00000012005	utp6	100	54.439	Takifugu_rubripes
MGP_SPRETEiJ_G0017672	Utp6	100	54.774	ENSTNIG00000003235	utp6	100	54.774	Tetraodon_nigroviridis
MGP_SPRETEiJ_G0017672	Utp6	67	75.691	ENSTBEG00000005388	-	67	75.691	Tupaia_belangeri
MGP_SPRETEiJ_G0017672	Utp6	100	85.092	ENSTTRG00000009911	UTP6	99	85.092	Tursiops_truncatus
MGP_SPRETEiJ_G0017672	Utp6	99	85.738	ENSUMAG00000015139	UTP6	99	85.738	Ursus_maritimus
MGP_SPRETEiJ_G0017672	Utp6	100	85.595	ENSVPAG00000005782	UTP6	99	85.595	Vicugna_pacos
MGP_SPRETEiJ_G0017672	Utp6	100	86.265	ENSVVUG00000012238	UTP6	99	86.265	Vulpes_vulpes
MGP_SPRETEiJ_G0017672	Utp6	99	50.839	ENSXETG00000020057	utp6	99	50.839	Xenopus_tropicalis
MGP_SPRETEiJ_G0017672	Utp6	100	54.167	ENSXCOG00000013626	utp6	99	54.167	Xiphophorus_couchianus
MGP_SPRETEiJ_G0017672	Utp6	100	54.181	ENSXMAG00000017414	utp6	99	54.181	Xiphophorus_maculatus